prot_C-linearis_contig9.16702.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16702.1
Unique Nameprot_C-linearis_contig9.16702.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length243
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 115..131
e-value: 0.015
score: 22.5
coord: 92..108
e-value: 3.5
score: 7.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 116..130
score: 9.686
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 93..107
score: 8.515
NoneNo IPR availableGENE3D4.10.60.10coord: 87..136
e-value: 1.9E-8
score: 35.9
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 90..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3136941..3137669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16702.1mRNA_C-linearis_contig9.16702.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3136941..3137785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16702.1 ID=prot_C-linearis_contig9.16702.1|Name=mRNA_C-linearis_contig9.16702.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=243bp
ADRTANYQGDPREREKAQHIDVQHSQQPQPQQQPQHPVLTAPALSALESE
NLQNAIKAGFVVGGHTDPGRNGLWVQPQGPVPAGAIMGQITYCGRCGHTG
HHARICRGPPRFFGECAACGESGHMARNCRFSDSNPVFRHHQQQQQRLQQ
QQPPRSQTYQPRARHLNAIGQPQQYNSMQQDFQASCKIGSFVPTQQSYIP
SPPQQQRLNSPPQDFKVAGDGGWGAQPGLMPQPQQQLHQPQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf