prot_C-linearis_contig9.16679.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16679.1
Unique Nameprot_C-linearis_contig9.16679.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length150
Homology
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BLAST of mRNA_C-linearis_contig9.16679.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 6.060e-21
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:    1 MLEDMRLVVEYGSRGGGRTSKEKMKCLNGGLDYYIIAHNDQKENNDRQEFTCNMNVTPPNFQHRLRA---TGTACTTASQEDRCTTALMFNVPYKGPNRSMSDNVVNFAIQRFTR 112
            ++ED  LVVEYGSRGGG T++ K K + G LD+YI+AH++   +     FTCN  VTP +F  +L A    G+  +TAS   R  + LM +VP+KG  R   DNVV FAIQR+T+
Sbjct:  710 VVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGR-RIPSPLMGDVPHKGVTRGYHDNVVQFAIQRWTK 823
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BLAST of mRNA_C-linearis_contig9.16679.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.700e-19
Identity = 55/115 (47.83%), Postives = 72/115 (62.61%), Query Frame = 0 
Query:    1 MLEDMRLVVEYGSRGGGRTSKEKMKCLNGGLDYYIIAHNDQKENNDRQEFTCNMNVTPPNFQHRLRA---TGTACTTASQEDRCTTALMFNVPYKGPNRSMSDNVVNFAIQRFTR 112
            ++ED  LVVEYGSRGGG T++ K K + G LD+YI+AH++   +     FTCN  VTP +F  R  A    G+  +TAS   R  + LM +VP KG  R   DNVV FAIQR+T+
Sbjct:  209 VVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNGCGDGGGMNFTCNDTVTPQSFTGRRSAGSSDGSTWSTASGR-RIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWTK 322
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK41_9PHAE6.060e-2147.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ29_ECTSI1.700e-1947.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2783849..2784459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16679.1mRNA_C-linearis_contig9.16679.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2783113..2784916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16679.1 ID=prot_C-linearis_contig9.16679.1|Name=mRNA_C-linearis_contig9.16679.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=150bp
MLEDMRLVVEYGSRGGGRTSKEKMKCLNGGLDYYIIAHNDQKENNDRQEF
TCNMNVTPPNFQHRLRATGTACTTASQEDRCTTALMFNVPYKGPNRSMSD
NVVNFAIQRFTRYRPHFHSRVRWGRRTCSILREKVQGLRRILSEGRRRG*
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