prot_C-linearis_contig9.16677.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16677.1
Unique Nameprot_C-linearis_contig9.16677.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length706
Homology
BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Match: D7FKN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN6_ECTSI)

HSP 1 Score: 558 bits (1438), Expect = 2.230e-187
Identity = 378/738 (51.22%), Postives = 453/738 (61.38%), Query Frame = 0
Query:    1 RHRPFLRPRWLQFLRQSAA------DATTSAAARHQAPVPSTP-SVSTEKFVAGPK-VPTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGM-------TPAHKGIYSNVLDAQANDTINNANGYSNTSCTTTSKPDLRAAYRGEG----GAQRGTNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGHKKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDASGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYANDGQALESFVPSEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEGISYFSLQPTQSNEASTPVTPSTKKRQ-----------------FHLPATDLVFVLSAAVQGSPECQRLVTQGGGIAAMLAILRQQTLGVDCEA-SICGGSARVNNESDGGARLAEMCLKVMEGLGQPERGRRRLVREGSVEAALAMIGRFRSDDGVLAAATGLLLLLSNSPNGRGRILEASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKARRELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEALATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGVLPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSSA 701
            R RPF+R +WL+ LR   A          S+AA   +   STP S     F +G +   T  +A  RV ++HVRSV+ LA SEAR+NAFVVIS LEGL SVA E +       TP+     S               G S+              Y G G    G++ G+     R   +T +    SS GR ESGAALCVRL A+PAVLGCL EH+GHKKIEPLA+RLL +FAS+  A++A+RGN AVAAAC +RM P      A  AS    G  AS+   +   D    D R+ SAG     G    G A  +   S E+   +  S +       P T ST       +L+ P     P + A  +   S   T+  E     +P  K R                   ++P TDLVFVLS AVQ SP CQRLV + GG+AAM A L+     V  EA S   G A   + SD  ARLAE CL+VME LG  ERGRRRLVR GSVE A++ I  FR   GVL AATGLLLLLS SP GRGRIL+A GF VVFEA+QRLVGN +VQVKG EMLQTLI+EEP+ARRE+D IKGGWQWLCQGTS G+AL+RY+PG+KHIPGWTVSEEE+L   +AL TAE+AAS+WTPYNLATFMGTMR+   +H+LQIGNLAYYHFFRVVSEAG+LPH +EDV DWR R+RRYEDERHIRV NIT+RRLARD++G HARSL SSS+
Sbjct:    2 RERPFVRQKWLKRLRHQTAINIESDHRDASSAALSPSNTTSTPASARAPAFSSGQEDAHTPPSALTRVGREHVRSVVQLALSEARVNAFVVISSLEGLLSVAAERIGREGPVGTPSSLREVSQAGGRSEGGNKKKRIGESSQDPAANLGGRATKLYPGPGRNDSGSEDGSLRRAHRGHPTTPSSTNGSSTGRGESGAALCVRLEAVPAVLGCLEEHAGHKKIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPSDNTANASTASFLSTGQ-ASDGGGVG--DDPGYDGRKGSAG-----GRKTLGNATSTTEASAEKVDSNGTSAMKPLDLGGPETGSTAGDGHGSSLAVP----APPSMANLLPCLSSN-TRLEEREEDASPERKSRDRAMSSAASARKSPPGSHMNVPTTDLVFVLSVAVQDSPVCQRLVLKAGGVAAMSATLQHLVSRVKQEAGSRWDGGAE--DCSDRYARLAETCLRVMEYLGCVERGRRRLVRGGSVEIAISTIRCFRCHSGVLTAATGLLLLLSVSPEGRGRILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGKKHIPGWTVSEEERLNTEKALETAEVAASNWTPYNLATFMGTMRS---QHQLQIGNLAYYHFFRVVSEAGLLPHPNEDVHDWRQRLRRYEDERHIRVGNITQRRLARDKTGAHARSLYSSSS 721          
BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Match: A0A6H5JF41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF41_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 8.570e-144
Identity = 337/774 (43.54%), Postives = 424/774 (54.78%), Query Frame = 0
Query:    1 RHRPFLRPRWLQFLRQSAA------DATTSAAARHQAPVPSTP-SVSTEKFVAGPK-VPTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGM-TPAHKGIYSNVLD-------AQANDTINN---ANGYSNTSCTTTSKPDLRAAYRGEGGAQRGTNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGHKKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDASGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYAND----GQALESFVPSEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEGISYFSLQPTQSNEASTPVTPSTKKRQ-----------------FHLPATDLVFVLSAAVQGSPECQRLVTQGGGIAAMLAILRQQTLGVDCEASICGGSARVNNE---SDGGARLAEMCLKVMEGLGQPERGRRRLVREGSVEAALAMI----------GRFRSDDGVLAAATGLLLLLSNSPNG-------------RGRIL--------EASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKARRELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEALATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGVLPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSS 700
            R RPF+R +WL+ LR   A          S+AA   +   STP S     F +G + V T  +A  RV ++HVRSV+ LA SEAR+NAFVVIS LEGL SVA E +      G  +++ D       ++  D  N    ++ YS       S      A R + G++ G+     R   +T +    SS G  ESGAALCVRLGA+PAVLGCL EH+GHK IEPLA+RLL +FAS+  A++A+RGN AVAAAC +RM P A +PA       G  ++ S  S ++      G E     G  RR+G A      G A  +   S E+   +  S +       P T ST       +L+ P     P+  A+ +   S       E     +P  ++R                    LP TDLVFVLS A+Q +PECQRLV + GG+AAM   L+     V   A    GS    +E   SD  ARLAEMCL+VME LG+ ERGRRRL R G VE A++ I           RFR    +   A       + S  G             R R+L        +A GF VVFEA+QRLVGN +VQVKG EMLQTLI+EEP+ARRE+D IKGGWQWLCQGTS G+AL+RY+PGEKHIPGWTVSEEE+LT  +AL TAE+AAS+WTPYNLATFMGTMR+   +H+LQ+GN+                          DR   YEDERHIRV NIT+RRLARD++G HARSL SSS
Sbjct:    2 RERPFVRQKWLKRLRHETAINIESDHRDASSAAFSPSNTTSTPASARAPAFSSGQEDVHTPPSALTRVGREHVRSVVELALSEARVNAFVVISSLEGLLSVATERLGREGSVGTPNSLHDVSQAGRRSEGGDETNRTGESSQYSAAKLGGRSTKLYSGAGRNDSGSEDGSLRRAQRGHPTTPSSTKGSSPGIGESGAALCVRLGAVPAVLGCLEEHAGHKTIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPSAALPATCAIDDNGGTANTSTASFLSTGQASHGREVGDDPGYDRRKGSAGRRKTLGNATSTMEASAEKFDSNGTSAVKPPGLGGPETGSTAGDGHGSSLAVP----APSTMAKLLPCLSSNTRLDGEEEEDASPERQRRDRVMSSAASTRKSPSGSPLKLPTTDLVFVLSVAMQDTPECQRLVLKAGGVAAMSTTLQHLISRVKQGA----GSRWDRSEEDCSDSYARLAEMCLRVMEHLGRVERGRRRLERGGYVEIAISTIRCFRGCHRGRDRFRIVGKLWPCAEHTRQPRARSSGGGSIFFCTCDILSTRRRLLYLHRCCPSQARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRS---QHQLQVGNMLLA-----------------------DRCHGYEDERHIRVGNITQRRLARDKTGAHARSLYSSS 741          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKN6_ECTSI2.230e-18751.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF41_9PHAE8.570e-14443.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 651..671
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 382..626
e-value: 1.6E-8
score: 35.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 387..576

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2732457..2736913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16677.1mRNA_C-linearis_contig9.16677.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2732457..2736913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16677.1 ID=prot_C-linearis_contig9.16677.1|Name=mRNA_C-linearis_contig9.16677.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=706bp
RHRPFLRPRWLQFLRQSAADATTSAAARHQAPVPSTPSVSTEKFVAGPKV
PTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGMTP
AHKGIYSNVLDAQANDTINNANGYSNTSCTTTSKPDLRAAYRGEGGAQRG
TNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGH
KKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDA
SGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYANDGQALESFVP
SEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEG
ISYFSLQPTQSNEASTPVTPSTKKRQFHLPATDLVFVLSAAVQGSPECQR
LVTQGGGIAAMLAILRQQTLGVDCEASICGGSARVNNESDGGARLAEMCL
KVMEGLGQPERGRRRLVREGSVEAALAMIGRFRSDDGVLAAATGLLLLLS
NSPNGRGRILEASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKAR
RELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEAL
ATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGV
LPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSS
ASLTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold