mRNA_C-linearis_contig9.16677.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16677.1
Unique NamemRNA_C-linearis_contig9.16677.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Match: D7FKN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN6_ECTSI)

HSP 1 Score: 558 bits (1438), Expect = 2.230e-187
Identity = 378/738 (51.22%), Postives = 453/738 (61.38%), Query Frame = 1 
Query:    1 RHRPFLRPRWLQFLRQSAA------DATTSAAARHQAPVPSTP-SVSTEKFVAGPK-VPTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGM-------TPAHKGIYSNVLDAQANDTINNANGYSNTSCTTTSKPDLRAAYRGEG----GAQRGTNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGHKKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDASGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYANDGQALESFVPSEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEGISYFSLQPTQSNEASTPVTPSTKKRQ-----------------FHLPATDLVFVLSAAVQGSPECQRLVTQGGGIAAMLAILRQQTLGVDCEA-SICGGSARVNNESDGGARLAEMCLKVMEGLGQPERGRRRLVREGSVEAALAMIGRFRSDDGVLAAATGLLLLLSNSPNGRGRILEASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKARRELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEALATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGVLPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSSA 2103
            R RPF+R +WL+ LR   A          S+AA   +   STP S     F +G +   T  +A  RV ++HVRSV+ LA SEAR+NAFVVIS LEGL SVA E +       TP+     S               G S+              Y G G    G++ G+     R   +T +    SS GR ESGAALCVRL A+PAVLGCL EH+GHKKIEPLA+RLL +FAS+  A++A+RGN AVAAAC +RM P      A  AS    G  AS+   +   D    D R+ SAG     G    G A  +   S E+   +  S +       P T ST       +L+ P     P + A  +   S   T+  E     +P  K R                   ++P TDLVFVLS AVQ SP CQRLV + GG+AAM A L+     V  EA S   G A   + SD  ARLAE CL+VME LG  ERGRRRLVR GSVE A++ I  FR   GVL AATGLLLLLS SP GRGRIL+A GF VVFEA+QRLVGN +VQVKG EMLQTLI+EEP+ARRE+D IKGGWQWLCQGTS G+AL+RY+PG+KHIPGWTVSEEE+L   +AL TAE+AAS+WTPYNLATFMGTMR+   +H+LQIGNLAYYHFFRVVSEAG+LPH +EDV DWR R+RRYEDERHIRV NIT+RRLARD++G HARSL SSS+
Sbjct:    2 RERPFVRQKWLKRLRHQTAINIESDHRDASSAALSPSNTTSTPASARAPAFSSGQEDAHTPPSALTRVGREHVRSVVQLALSEARVNAFVVISSLEGLLSVAAERIGREGPVGTPSSLREVSQAGGRSEGGNKKKRIGESSQDPAANLGGRATKLYPGPGRNDSGSEDGSLRRAHRGHPTTPSSTNGSSTGRGESGAALCVRLEAVPAVLGCLEEHAGHKKIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPSDNTANASTASFLSTGQ-ASDGGGVG--DDPGYDGRKGSAG-----GRKTLGNATSTTEASAEKVDSNGTSAMKPLDLGGPETGSTAGDGHGSSLAVP----APPSMANLLPCLSSN-TRLEEREEDASPERKSRDRAMSSAASARKSPPGSHMNVPTTDLVFVLSVAVQDSPVCQRLVLKAGGVAAMSATLQHLVSRVKQEAGSRWDGGAE--DCSDRYARLAETCLRVMEYLGCVERGRRRLVRGGSVEIAISTIRCFRCHSGVLTAATGLLLLLSVSPEGRGRILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGKKHIPGWTVSEEERLNTEKALETAEVAASNWTPYNLATFMGTMRS---QHQLQIGNLAYYHFFRVVSEAGLLPHPNEDVHDWRQRLRRYEDERHIRVGNITQRRLARDKTGAHARSLYSSSS 721
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BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Match: A0A6H5JF41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF41_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 8.570e-144
Identity = 337/774 (43.54%), Postives = 424/774 (54.78%), Query Frame = 1 
Query:    1 RHRPFLRPRWLQFLRQSAA------DATTSAAARHQAPVPSTP-SVSTEKFVAGPK-VPTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGM-TPAHKGIYSNVLD-------AQANDTINN---ANGYSNTSCTTTSKPDLRAAYRGEGGAQRGTNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGHKKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDASGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYAND----GQALESFVPSEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEGISYFSLQPTQSNEASTPVTPSTKKRQ-----------------FHLPATDLVFVLSAAVQGSPECQRLVTQGGGIAAMLAILRQQTLGVDCEASICGGSARVNNE---SDGGARLAEMCLKVMEGLGQPERGRRRLVREGSVEAALAMI----------GRFRSDDGVLAAATGLLLLLSNSPNG-------------RGRIL--------EASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKARRELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEALATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGVLPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSS 2100
            R RPF+R +WL+ LR   A          S+AA   +   STP S     F +G + V T  +A  RV ++HVRSV+ LA SEAR+NAFVVIS LEGL SVA E +      G  +++ D       ++  D  N    ++ YS       S      A R + G++ G+     R   +T +    SS G  ESGAALCVRLGA+PAVLGCL EH+GHK IEPLA+RLL +FAS+  A++A+RGN AVAAAC +RM P A +PA       G  ++ S  S ++      G E     G  RR+G A      G A  +   S E+   +  S +       P T ST       +L+ P     P+  A+ +   S       E     +P  ++R                    LP TDLVFVLS A+Q +PECQRLV + GG+AAM   L+     V   A    GS    +E   SD  ARLAEMCL+VME LG+ ERGRRRL R G VE A++ I           RFR    +   A       + S  G             R R+L        +A GF VVFEA+QRLVGN +VQVKG EMLQTLI+EEP+ARRE+D IKGGWQWLCQGTS G+AL+RY+PGEKHIPGWTVSEEE+LT  +AL TAE+AAS+WTPYNLATFMGTMR+   +H+LQ+GN+                          DR   YEDERHIRV NIT+RRLARD++G HARSL SSS
Sbjct:    2 RERPFVRQKWLKRLRHETAINIESDHRDASSAAFSPSNTTSTPASARAPAFSSGQEDVHTPPSALTRVGREHVRSVVELALSEARVNAFVVISSLEGLLSVATERLGREGSVGTPNSLHDVSQAGRRSEGGDETNRTGESSQYSAAKLGGRSTKLYSGAGRNDSGSEDGSLRRAQRGHPTTPSSTKGSSPGIGESGAALCVRLGAVPAVLGCLEEHAGHKTIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPSAALPATCAIDDNGGTANTSTASFLSTGQASHGREVGDDPGYDRRKGSAGRRKTLGNATSTMEASAEKFDSNGTSAVKPPGLGGPETGSTAGDGHGSSLAVP----APSTMAKLLPCLSSNTRLDGEEEEDASPERQRRDRVMSSAASTRKSPSGSPLKLPTTDLVFVLSVAMQDTPECQRLVLKAGGVAAMSTTLQHLISRVKQGA----GSRWDRSEEDCSDSYARLAEMCLRVMEHLGRVERGRRRLERGGYVEIAISTIRCFRGCHRGRDRFRIVGKLWPCAEHTRQPRARSSGGGSIFFCTCDILSTRRRLLYLHRCCPSQARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRS---QHQLQVGNMLLA-----------------------DRCHGYEDERHIRVGNITQRRLARDKTGAHARSLYSSS 741
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKN6_ECTSI2.230e-18751.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF41_9PHAE8.570e-14443.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2732457..2736913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-09_000900.1
Exons8
Model size2118
Cds size2118
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16677.1prot_C-linearis_contig9.16677.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 2732457..2736913 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930754.3216243-CDS-C-linearis_contig9:2732456..27325741622930754.3216243-CDS-C-linearis_contig9:2732456..2732574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2732457..2732574 -
1690881232.2286487-CDS-C-linearis_contig9:2732456..27325741690881232.2286487-CDS-C-linearis_contig9:2732456..2732574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2732457..2732574 -
1622930754.3500392-CDS-C-linearis_contig9:2732892..27329961622930754.3500392-CDS-C-linearis_contig9:2732892..2732996Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2732893..2732996 -
1690881232.2409697-CDS-C-linearis_contig9:2732892..27329961690881232.2409697-CDS-C-linearis_contig9:2732892..2732996Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2732893..2732996 -
1622930754.3744695-CDS-C-linearis_contig9:2733268..27334101622930754.3744695-CDS-C-linearis_contig9:2733268..2733410Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2733269..2733410 -
1690881232.2539165-CDS-C-linearis_contig9:2733268..27334101690881232.2539165-CDS-C-linearis_contig9:2733268..2733410Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2733269..2733410 -
1622930754.391072-CDS-C-linearis_contig9:2733932..27340421622930754.391072-CDS-C-linearis_contig9:2733932..2734042Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2733933..2734042 -
1690881232.2700386-CDS-C-linearis_contig9:2733932..27340421690881232.2700386-CDS-C-linearis_contig9:2733932..2734042Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2733933..2734042 -
1622930754.4110758-CDS-C-linearis_contig9:2734382..27344931622930754.4110758-CDS-C-linearis_contig9:2734382..2734493Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2734383..2734493 -
1690881232.2791743-CDS-C-linearis_contig9:2734382..27344931690881232.2791743-CDS-C-linearis_contig9:2734382..2734493Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2734383..2734493 -
1622930754.430992-CDS-C-linearis_contig9:2734771..27348561622930754.430992-CDS-C-linearis_contig9:2734771..2734856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2734772..2734856 -
1690881232.2885158-CDS-C-linearis_contig9:2734771..27348561690881232.2885158-CDS-C-linearis_contig9:2734771..2734856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2734772..2734856 -
1622930754.454386-CDS-C-linearis_contig9:2735411..27363561622930754.454386-CDS-C-linearis_contig9:2735411..2736356Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2735412..2736356 -
1690881232.2983036-CDS-C-linearis_contig9:2735411..27363561690881232.2983036-CDS-C-linearis_contig9:2735411..2736356Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2735412..2736356 -
1622930754.4740138-CDS-C-linearis_contig9:2736410..27369131622930754.4740138-CDS-C-linearis_contig9:2736410..2736913Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2736411..2736913 -
1690881232.3089395-CDS-C-linearis_contig9:2736410..27369131690881232.3089395-CDS-C-linearis_contig9:2736410..2736913Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2736411..2736913 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16677.1

>prot_C-linearis_contig9.16677.1 ID=prot_C-linearis_contig9.16677.1|Name=mRNA_C-linearis_contig9.16677.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=706bp
RHRPFLRPRWLQFLRQSAADATTSAAARHQAPVPSTPSVSTEKFVAGPKV
PTKSAASIRVRKDHVRSVIHLASSEARINAFVVISCLEGLFSVAMEGMTP
AHKGIYSNVLDAQANDTINNANGYSNTSCTTTSKPDLRAAYRGEGGAQRG
TNSSVPRADYSTANEVFRSSNGREESGAALCVRLGALPAVLGCLNEHSGH
KKIEPLAIRLLLIFASDRAASSAVRGNTAVAAACTSRMFPVAVVPAAGDA
SGFGLGSDASEPSSIALKDTCCGDERQASAGSGRRRGYANDGQALESFVP
SEEESREHPASTLSATTTSKPTTTSTETQPFRMALSSPNASERPAASAEG
ISYFSLQPTQSNEASTPVTPSTKKRQFHLPATDLVFVLSAAVQGSPECQR
LVTQGGGIAAMLAILRQQTLGVDCEASICGGSARVNNESDGGARLAEMCL
KVMEGLGQPERGRRRLVREGSVEAALAMIGRFRSDDGVLAAATGLLLLLS
NSPNGRGRILEASGFIVVFEAVQRLVGNAVVQVKGVEMLQTLISEEPKAR
RELDGIKGGWQWLCQGTSSGNALVRYSPGEKHIPGWTVSEEEKLTNHEAL
ATAEMAASDWTPYNLATFMGTMRTGSHEHKLQIGNLAYYHFFRVVSEAGV
LPHAHEDVEDWRDRMRRYEDERHIRVSNITRRRLARDRSGGHARSLGSSS
ASLTR*
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mRNA from alignment at C-linearis_contig9:2732457..2736913-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16677.1 ID=mRNA_C-linearis_contig9.16677.1|Name=mRNA_C-linearis_contig9.16677.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4457bp|location=Sequence derived from alignment at C-linearis_contig9:2732457..2736913- (Chordaria linearis ClinC8C monoicous)
CGCCACCGGCCGTTTTTGCGGCCACGGTGGCTGCAATTTCTTCGTCAGTC
CGCAGCAGATGCAACAACCTCCGCAGCAGCAAGACACCAAGCCCCCGTCC
CCAGCACACCGTCTGTATCAACCGAAAAGTTTGTTGCAGGCCCAAAAGTC
CCCACGAAATCGGCGGCATCGATCCGGGTGCGGAAGGACCACGTCAGAAG
CGTCATTCACCTGGCCTCTTCAGAGGCTAGGATCAACGCGTTCGTAGTTA
TCAGCTGTCTCGAGGGGCTCTTTTCGGTGGCCATGGAGGGCATGACACCA
GCACACAAAGGTATTTATTCGAATGTTTTGGATGCCCAAGCGAACGACAC
CATCAACAACGCGAACGGGTACAGCAACACAAGCTGCACAACTACAAGCA
AGCCTGATCTTCGTGCAGCATATCGCGGAGAAGGAGGCGCGCAACGAGGT
ACCAACTCTTCGGTTCCGAGGGCCGACTACTCGACGGCGAACGAAGTTTT
CCGGTGCGAGAGCGTTTCCGACACAGCTGCTACAATCGCTGCTGGCAGTA
GCTGCAGCAGCAGCAACGGAAGGGAAGAAAGTGGCGCAGCCTTGTGCGTA
AGGCTTGGGGCGCTCCCTGCGGTGCTTGGCTGTCTCAATGAGCACTCGGG
TCACAAGAAGATAGAGCCGCTGGCCATCAGGCTTCTACTCATATTTGCAA
GCGACCGCGCCGCGTCTAGTGCCGTCAGAGGGAACACCGCGGTGGCGGCT
GCTTGCACCTCTCGAATGTTTCCGGTGGCTGTGGTCCCCGCCGCCGGAGA
TGCAAGCGGATTCGGGCTTGGCAGTGACGCCTCGGAACCAAGCAGCATCG
CCTTGAAGGACACCTGCTGTGGAGACGAAAGACAAGCGAGTGCGGGGTCC
GGCAGGAGAAGGGGGTATGCCAATGACGGCCAGGCTTTAGAAAGCTTCGT
CCCTTCCGAAGAGGAGTCCAGGGAGCACCCTGCATCGACCTTATCAGCAA
CGACAACCTCAAAGCCAACAACGACAAGCACAGAGACGCAGCCTTTCAGG
ATGGCACTAAGCTCGCCAAATGCCTCCGAAAGGCCTGCTGCTTCCGCGGA
AGGCATTTCCTATTTTTCGCTACAACCGACACAGAGCAACGAAGCATCAA
CACCAGTCACACCATCAACAAAAAAACGACAATTCCATCTTCCGGCGACG
GACTTGGTGTTTGTGCTCTCGGCGGCGGTGCAGGGTAGCCCGGAGTGCCA
GCGCCTCGTCACTCAAGGCGGCGGTATAGCCGCCATGTTGGCAATCTTGC
GGCAGCAGACTTTAGGAGTTGACTGCGAAGCGAGCATTTGCGGCGGCAGT
GCAAGGGTAAACAACGAGAGCGATGGCGGAGCCAGACTAGCGGAGATGTG
CCTGAAGGTCATGGAAGGTCTCGGCCAACCAGAGCGTGGGAGAAGGCGGC
TAGTCAGAGAAGGTTCCGTGGAGGCGGCACTCGCAATGATCGGGCGGTTC
AGGTGGGTTTCCAACGATTTGGTATATTTGATCACATTAGGCGCAATGTG
TTCCTCGTAAATAGTACATCGGTTCTCGGCAAGATGCAGTTCTCCTCTCT
GCTGCAATATATTGGTTTAGGGAATTGAATGATTCCGGCCAAGGAACATT
GGCTCCGTGGGAGGCTCAAAAATGTGAATGTGATTCTTGGAGCGCAAGAC
ATTTTCTGAAGAGATGAACGCCATCGCCGCTTGATGTGAAACGTCCACGC
GCGTAAATTTGGCGGCGATATTGACTGTGAAACGAATAGGGGCGGGAGGG
CGAAGAATATTTCCAGTTGAATGCACGGAAGGAGACAGACTGGAACCTTG
AAATATCATCAATATACCTTATAACAACTTGCACCGCAGTACGTGAGAGT
CTCTGGAGCTTGCAGGTAGGAATAACACATTAAGCCTTTGCTAGATCGAG
TACACTGGGCGATAGTAGTGAATGGGGCCCAAGTGCTTCGCAAATTTCAT
TCCTGAGACGTGCGCGCAACTGCTAATTGCACTTCTGATTATGCTTGCCG
CTTACAGATCTGACGATGGTGTCCTTGCCGCCGCAACGGGGCTGCTTCTT
CTCTTGAGCAATTCTCCCAACGGGCGCGGCCGTATTCTCGAGGTAGCACC
GACGTGCAGATTACTCGAACGAGGGTAGTAATTGCCTTTCTGTCAGTCCA
CGGGACATTGTTTGTCAGTGCGTCCTACGGTGTATGTATGCAGTCGACAA
GCCACGAGTACCTGTAATCCCCACATCTAAAGGCTTGCATGCCAAATGGA
TCACCCAAGTTATTGTGAAAAGCGAATTTGTCTGATAAGGCTTGTGCCCT
CTTTGATTAAAGTTGCCCTCGGTGTGTGGCGTCCTTGCACCTCTCTTTGT
ATTGCCAACAACAATGTCAGGCCAGCGGATTTATCGTTGTGTTCGAAGCT
GTACAGCGGCTTGTTGGCAACGCTGTGGTGCAGGTCAAGGGAGTGGAGAT
GCTGCAGACCTTGATCAGTGAGGAACCCAAGGTGGGAGGTTGGAAAGCAC
CCCGTGGTCTGTTCTTTACCTTGCTACTGCTGCCATTTTGTTGTTGGTGC
TGCTGCTAATTTTCATCATGGGTTCAGCTGTAAGCACCTGTCCATTTTGT
TTTGGTGATGAGGTTTGGGGATCCTTTTTCGCCAAGACAATTGTTTCATT
GCAACGAGAGCGTGAATCATACCCAATGCAAAAGTTGGTCTGGCAGCGTA
GTATGCCGACCAAGTGTGTAACCAGATGAAGCGTTTGTGGACCTCAGCGT
CCACATGCACAAAGGACTGCGAACGGTCACTCAAACATAATGCAACGGAC
GTCGTGACGCTGTCAATACAGGCGAGGCGCGAACTAGACGGCATCAAGGG
AGGCTGGCAGTGGCTGTGCCAGGGAACCTCGAGTGGCAACGCGTTGGTTC
GATATTCGCCGGGCGAGAAACATATCCCTGGGTGAGTAGGCCGAGTAATT
ACGCGAAGCACCGCAGCCGTAGGAACCCGGCGCTCGAATGACCCGGCAAG
CCCCCCCTCTTGAGAGTGTTTGCCGCTGTCTCCTGCAGTTGGGAACCTCA
ACCTCCTGCGAAGGTGATCTTGAGCCCCTCCTTCATTGGCAGCCCCGCTC
CCGCGCTTGAGTACGCAGCTTTTGATGTTTGAAGTCCAAGCAATCAATTT
CAGTGAGGTTGGAATTTACTTTGAGCGGCAAGAAAAGTGCTGAACACCGC
AGCGGGTAGAGATTTGGCATCATATGCACCACTCAACACCAACAAAACGT
ACCAGGTCCCGTGCTGCAAATGCTACAAACCAGTAAAAGTATTGGTATGG
GGGAATGTTTCGCCGACGAGAAGTGAAAAAAAATTAGTAATGTACAACAC
GATGATACTTCGTGTAGAAGTCATGCAATCGTCTCGTTCAGAGGGACTTT
CCTCGCCGCATCCTCGCTGTTTTGTTCTTGAACGGTATTACTGCCTACCA
TAGATGGACCGTGAGTGAGGAGGAAAAGCTCACGAATCACGAGGCCCTGG
CGACGGCAGAAATGGCGGCCTCCGATTGGACGCCTTACAACCTCGCCACC
TTCATGGGCACCATGCGCACTGGTAGCCATGAACACAAGCTGCAGGTGAG
TGCGGCAAGGAGCGCAGCCTCTGTCGCCGTTGTCGTACACATTTTTTATT
CCAGAGCAAACCTGAACAGGTGACAAAGAAAGTCCAAGCATAAACCACCG
CTTTTATTAGGCATCCTCTCTCCAACACTGCTAGACAGGCAAATGCCCGC
AACTCGTGAAGGGGGTGGGTGTTGTTCTTCCGAAACACGGCTCGAATCTA
GGAATCCCAACGGACCGATTTCACTTTGTCCAAACAGCTGAGTCCCTCTT
TGATCTTGGCGCGTCAGATCGGAAATCTAGCGTACTACCATTTCTTCCGG
GTGGTGAGCGAGGCCGGTGTGTTGCCCCACGCGCACGAGGACGTCGAGGA
CTGGCGCGATCGCATGCGGAGGTAAAATTTCATTTTTTTATCATTCGTTT
ATCACCTCTATGTGGTTATGAATGAATCAGCTTGCGACGTTATCAGCTCT
AGACTTCTCTACAAAGTTGTTCAGGGAGATTTCCATAAGACTTGAAACCT
TGCCTTGCAGATAAATGCTGAGGGGTGGCTGTCCCCAGAATCCTTGCCGT
GCAACAAGTGAACTCTGGCGTGCTCCTAAGGTGCTTCGAGCGTTGCTCTG
GTTCTTGCTGTCATCCAAGTTCCCTTTCGTCTCGCACTCTGAAAAATGAT
GCTTGTGCTGCTCATCATGTACATACGGTGTGGCGGCAGATACGAAGACG
AGAGACACATCCGGGTTAGCAATATCACGCGTAGAAGGCTCGCCAGAGAC
AGGAGTGGGGGACACGCCAGGTCCTTGGGTTCTTCGTCTGCATCCCTTAC
GCGCTAA
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Coding sequence (CDS) from alignment at C-linearis_contig9:2732457..2736913-

>mRNA_C-linearis_contig9.16677.1 ID=mRNA_C-linearis_contig9.16677.1|Name=mRNA_C-linearis_contig9.16677.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4236bp|location=Sequence derived from alignment at C-linearis_contig9:2732457..2736913- (Chordaria linearis ClinC8C monoicous)
CGCCACCGGCCGTTTTTGCGGCCACGGTGGCTGCAATTTCTTCGTCAGTC
CGCAGCAGATGCAACAACCTCCGCAGCAGCAAGACACCAAGCCCCCGTCC
CCAGCACACCGTCTGTATCAACCGAAAAGTTTGTTGCAGGCCCAAAAGTC
CCCACGAAATCGGCGGCATCGATCCGGGTGCGGAAGGACCACGTCAGAAG
CGTCATTCACCTGGCCTCTTCAGAGGCTAGGATCAACGCGTTCGTAGTTA
TCAGCTGTCTCGAGGGGCTCTTTTCGGTGGCCATGGAGGGCATGACACCA
GCACACAAAGGTATTTATTCGAATGTTTTGGATGCCCAAGCGAACGACAC
CATCAACAACGCGAACGGGTACAGCAACACAAGCTGCACAACTACAAGCA
AGCCTGATCTTCGTGCAGCATATCGCGGAGAAGGAGGCGCGCAACGAGGT
ACCAACTCTTCGGTTCCGAGGGCCGACTACTCGACGGCGAACGAAGTTTT
CCGCGCCACCGGCCGTTTTTGCGGCCACGGTGGCTGCAATTTCTTCGTCA
GTCCGCAGCAGATGCAACAACCTCCGCAGCAGCAAGACACCAAGCCCCCG
TCCCCAGCACACCGTCTGTATCAACCGAAAAGTTTGTTGCAGGCCCAAAA
GTCCCCACGAAATCGGCGGCATCGATCCGGGTGCGGAAGGACCACGTCAG
AAGCGTCATTCACCTGGCCTCTTCAGAGGCTAGGATCAACGCGTTCGTAG
TTATCAGCTGTCTCGAGGGGCTCTTTTCGGTGGCCATGGAGGGCATGACA
CCAGCACACAAAGGTATTTATTCGAATGTTTTGGATGCCCAAGCGAACGA
CACCATCAACAACGCGAACGGGTACAGCAACACAAGCTGCACAACTACAA
GCAAGCCTGATCTTCGTGCAGCATATCGCGGAGAAGGAGGCGCGCAACGA
GGTACCAACTCTTCGGTTCCGAGGGCCGACTACTCGACGGCGAACGAAGT
TTTCCGCAGCAGCAACGGAAGGGAAGAAAGTGGCGCAGCCTTGTGCGTAA
GGCTTGGGGCGCTCCCTGCGGTGCTTGGCTGTCTCAATGAGCACTCGGGT
CACAAGAAGATAGAGCCGCTGGCCATCAGGCTTCTACTCATATTTGCAAG
CGACCGCGCCGCGTCTAGTGCCGTCAGAGGGAACACCGCGGTGGCGGCTG
CTTGCACCTCTCGAATGTTTCCGGTGGCTGTGGTCCCCGCCGCCGGAGAT
GCAAGCGGATTCGGGCTTGGCAGTGACGCCTCGGAACCAAGCAGCATCGC
CTTGAAGGACACCTGCTGTGGAGACGAAAGACAAGCGAGTGCGGGGTCCG
GCAGGAGAAGGGGGTATGCCAATGACGGCCAGGCTTTAGAAAGCTTCGTC
CCTTCCGAAGAGGAGTCCAGGGAGCACCCTGCATCGACCTTATCAGCAAC
GACAACCTCAAAGCCAACAACGACAAGCACAGAGACGCAGCCTTTCAGGA
TGGCACTAAGCTCGCCAAATGCCTCCGAAAGGCCTGCTGCTTCCGCGGAA
GGCATTTCCTATTTTTCGCTACAACCGACACAGAGCAACGAAGCATCAAC
ACCAGTCACACCATCAACAAAAAAACGACAATTCCATCTTCCGGCGACGG
ACTTGGTGTTTGTGCTCTCGGCGGCGGTGCAGGGTAGCCCGGAGTGCCAG
CGCCTCGTCACTCAAGGCGGCGGTATAGCCGCCATGTTGGCAATCTTGCG
GCAGCAGACTTTAGGAGTTGACTGCGAAGCGAGCATTTGCGGCGGCAGTG
CAAGGGTAAACAACGAGAGCGATGGCGGAGCCAGACTAGCGGAGATGTGC
CTGAAGGTCATGGAAGGTCTCGGCCAACCAGAGCGTGGGAGAAGGCGGCT
AGTCAGAGAAGGTTCCGTGGAGGCGGCACTCGCAATGATCGGGCGGTTCA
GCAGCAGCAACGGAAGGGAAGAAAGTGGCGCAGCCTTGTGCGTAAGGCTT
GGGGCGCTCCCTGCGGTGCTTGGCTGTCTCAATGAGCACTCGGGTCACAA
GAAGATAGAGCCGCTGGCCATCAGGCTTCTACTCATATTTGCAAGCGACC
GCGCCGCGTCTAGTGCCGTCAGAGGGAACACCGCGGTGGCGGCTGCTTGC
ACCTCTCGAATGTTTCCGGTGGCTGTGGTCCCCGCCGCCGGAGATGCAAG
CGGATTCGGGCTTGGCAGTGACGCCTCGGAACCAAGCAGCATCGCCTTGA
AGGACACCTGCTGTGGAGACGAAAGACAAGCGAGTGCGGGGTCCGGCAGG
AGAAGGGGGTATGCCAATGACGGCCAGGCTTTAGAAAGCTTCGTCCCTTC
CGAAGAGGAGTCCAGGGAGCACCCTGCATCGACCTTATCAGCAACGACAA
CCTCAAAGCCAACAACGACAAGCACAGAGACGCAGCCTTTCAGGATGGCA
CTAAGCTCGCCAAATGCCTCCGAAAGGCCTGCTGCTTCCGCGGAAGGCAT
TTCCTATTTTTCGCTACAACCGACACAGAGCAACGAAGCATCAACACCAG
TCACACCATCAACAAAAAAACGACAATTCCATCTTCCGGCGACGGACTTG
GTGTTTGTGCTCTCGGCGGCGGTGCAGGGTAGCCCGGAGTGCCAGCGCCT
CGTCACTCAAGGCGGCGGTATAGCCGCCATGTTGGCAATCTTGCGGCAGC
AGACTTTAGGAGTTGACTGCGAAGCGAGCATTTGCGGCGGCAGTGCAAGG
GTAAACAACGAGAGCGATGGCGGAGCCAGACTAGCGGAGATGTGCCTGAA
GGTCATGGAAGGTCTCGGCCAACCAGAGCGTGGGAGAAGGCGGCTAGTCA
GAGAAGGTTCCGTGGAGGCGGCACTCGCAATGATCGGGCGGTTCAGATCT
GACGATGGTGTCCTTGCCGCCGCAACGGGGCTGCTTCTTCTCTTGAGCAA
TTCTCCCAACGGGCGCGGCCGTATTCTCGAGATCTGACGATGGTGTCCTT
GCCGCCGCAACGGGGCTGCTTCTTCTCTTGAGCAATTCTCCCAACGGGCG
CGGCCGTATTCTCGAGGCCAGCGGATTTATCGTTGTGTTCGAAGCTGTAC
AGCGGCTTGTTGGCAACGCTGTGGTGCAGGTCAAGGGAGTGGAGATGCTG
CAGACCTTGATCAGTGAGGAACCCAAGGCCAGCGGATTTATCGTTGTGTT
CGAAGCTGTACAGCGGCTTGTTGGCAACGCTGTGGTGCAGGTCAAGGGAG
TGGAGATGCTGCAGACCTTGATCAGTGAGGAACCCAAGGCGAGGCGCGAA
CTAGACGGCATCAAGGGAGGCTGGCAGTGGCTGTGCCAGGGAACCTCGAG
TGGCAACGCGTTGGTTCGATATTCGCCGGGCGAGAAACATATCCCTGGGC
GAGGCGCGAACTAGACGGCATCAAGGGAGGCTGGCAGTGGCTGTGCCAGG
GAACCTCGAGTGGCAACGCGTTGGTTCGATATTCGCCGGGCGAGAAACAT
ATCCCTGGATGGACCGTGAGTGAGGAGGAAAAGCTCACGAATCACGAGGC
CCTGGCGACGGCAGAAATGGCGGCCTCCGATTGGACGCCTTACAACCTCG
CCACCTTCATGGGCACCATGCGCACTGGTAGCCATGAACACAAGCTGCAG
ATGGACCGTGAGTGAGGAGGAAAAGCTCACGAATCACGAGGCCCTGGCGA
CGGCAGAAATGGCGGCCTCCGATTGGACGCCTTACAACCTCGCCACCTTC
ATGGGCACCATGCGCACTGGTAGCCATGAACACAAGCTGCAGATCGGAAA
TCTAGCGTACTACCATTTCTTCCGGGTGGTGAGCGAGGCCGGTGTGTTGC
CCCACGCGCACGAGGACGTCGAGGACTGGCGCGATCGCATGCGGAGATCG
GAAATCTAGCGTACTACCATTTCTTCCGGGTGGTGAGCGAGGCCGGTGTG
TTGCCCCACGCGCACGAGGACGTCGAGGACTGGCGCGATCGCATGCGGAG
ATACGAAGACGAGAGACACATCCGGGTTAGCAATATCACGCGTAGAAGGC
TCGCCAGAGACAGGAGTGGGGGACACGCCAGGTCCTTGGGTTCTTCGTCT
GCATCCCTTACGCGCTAAATACGAAGACGAGAGACACATCCGGGTTAGCA
ATATCACGCGTAGAAGGCTCGCCAGAGACAGGAGTGGGGGACACGCCAGG
TCCTTGGGTTCTTCGTCTGCATCCCTTACGCGCTAA
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