prot_C-linearis_contig9.16671.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16671.1
Unique Nameprot_C-linearis_contig9.16671.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length937
Homology
BLAST of mRNA_C-linearis_contig9.16671.1 vs. uniprot
Match: A0A6H5JD13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD13_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 7.980e-153
Identity = 418/971 (43.05%), Postives = 493/971 (50.77%), Query Frame = 0
Query:    1 MATFCESWDSNWMDGSCAGLDENIDDHVVDAHAFEAALEPLPAWDGVEYSAIGGNTTGRSSKNHATAVPPRRQHDWANSTPHTFKQDHGKIFDRLDLQTLSLDHDEEGGDITGADSSVLRKSMLAGNIDVEVEKPL-QSWS---TRSPAPKQQGSSPEPERTLTHLIRLHRTGSVVVERTASPRAPSA---GAAAVGAPESGYGGF-YAEEERFWLERCPPAEPVAADRRDKETKAAVAAQWKTPLASSSPGTQAAVAVGRAANYDYFSAEAAYRLSPRPQTAADPRYSNRENDGFVREGRGGNTTPSSQRRPSFDRQGGXXXGFQDADNPPQPNPQPSR---PPRRQVARDRRGGHAGEIGRNRNTXXXXXXXXXXXXXSLRDAEAILHGVLEAVEGGLST---------IEDPSPSRRAPGEDHVSALLQRVAEPCRGETPVRTSSKRGIRKQRNHGGS---PSPVTINNQVRRHRKSTDSSDDASNHAPSSSSGSHSPLRVPPLQLRSSESARRKGTTMRDLSSQQEYDHERGVME-------AGEEEDAGG------DESAVRVAELSRRIASRCLQLEQECSTREQSQTRLFQEQLRGVRQTAQQVARRMIRDERSRASQSLAEAQKKFEEREAAALAKXXXMEDGRKAERETLAANLATAKSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAEEKGGLRRAAEDALRRVVDAKTRAEEEAALKAQATQDALNAQVRSWKAKAEAAGKRATEERDRGRRFEAGAQGALAQEVEKARESQERTIRELRTKSEADRAAHAEELERIKEEHRANILRVHQDKKRLSEAARRQWEQEMEEVRADAAARIEDSAARSAAERAEALRRLRLAHDVEMRKAGRDILRLEREARRCQRQ-EPAGVVARSKSGSSSLSPLRPGAYSPKPLPEEAAVATSCLDGVEAEGGFQALSSPGFGNSKAAENPGE 934
            M TFCESWDSNWMDGSC G   N DD    A AFEAAL+PLPAWDG+ YS   GN            V   RQ D   S      + H  + D LDL  +++  DE  GD T   SS LR + LAG+ D  +  P+ Q+WS   + SP PK +G   E    LTH+IRLHRTGSVVVER   P A       A A G  +     + YAEEERFW  RCPP           E   AV  Q   P AS     +   A GRAANYDYF+AEAA+ L+  P   + P   N         GRG       +    F+ +         AD   Q N        PP R+ AR      A  I     T             SLRDAE++L GVLE+VE   ST          ED   +   P  +  S L Q VA   R E       +RG      HGGS    SP     Q  RH        D  N          SPL +  +  RS   +R +G   R  S Q +   +R  +E       A  EE           ESA RVAELSRRIA RC            SQTRLFQEQLR VR  AQQVARR I DER R  Q L E Q++FEE+E   +AK    E+  K ERE+L AN A AKSE+                                 AEEKGGLRRAAEDALRR ++   RA EEAA KAQA QD+L+AQVRSWKAK E A +RA EER++ +  EAG +GALAQE                              ER++EEHRA +LRVHQDKK L EAARR+WE+EM+E+R +A A+ ED+A R+ AER+EALRRLRLAHD EMRKAGRDILRLEREARRCQ+Q EP+G+  RSK  +S+LSPL  G+YS +PL  E A A SCLDGVEAE G Q   S          NPG+
Sbjct:    1 MGTFCESWDSNWMDGSCGGFQNNADDSDGGADAFEAALQPLPAWDGLAYSTNRGNAEN-------DIVWGTRQSDRDRSAASPSPEHHPGMLDDLDLGAVNVGPDE-AGDCTDNVSSTLRTTKLAGDPD-GMHPPIGQAWSETRSTSPEPKPKGHDLETGDNLTHVIRLHRTGSVVVERKGKPNARGGIIGDAGAFGPRQHAAEQYSYAEEERFWQARCPP-----------EADNAVVVQRTAPTAS----PRVTKANGRAANYDYFAAEAAH-LAGSPAGKSVPPGGNSS-----LRGRGPGQPTGRRTTTRFEEK---------ADACVQENCATQGTHVPPPRRTARKGCSARAKAI-----TERKRDKAQRRRLQSLRDAESVLRGVLESVEDAPSTGEVCRKTAAEEDSYSTMDTPQGERFSVLRQNVANLFRDEA----HEERGESSTGKHGGSMGGTSPSKYRAQTSRHY-------DGDNWP--------SPLGIRRVGNRSG--SRERGAMARGTSQQVDQHEQRQCIEDERAEGLAHSEEXXXXXXGXXXQESAGRVAELSRRIAMRCXXXXXXXXXXXXSQTRLFQEQLRSVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKERGLVAKLNLAEESWKVERESLNANTAAAKSEVEKCRRQARAAAEAGMNASREALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREEAAKKAQAAQDSLDAQVRSWKAKTETAERRAAEEREKRKGLEAGVKGALAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTERLQEEHRAALLRVHQDKKSLFEAARRKWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQEPSGMAPRSKQDNSTLSPLPRGSYSLRPLVSETAGARSCLDGVEAEMGSQTSPSSVLTTPSINANPGK 906          
BLAST of mRNA_C-linearis_contig9.16671.1 vs. uniprot
Match: D7FKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN2_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 2.500e-95
Identity = 222/409 (54.28%), Postives = 267/409 (65.28%), Query Frame = 0
Query:  505 QQEYDHER-GVMEAGEEEDAGGD-------ESAVRVAELSRRIASRCLQLEQECSTREQSQTRLFQEQLRGVRQTAQQVARRMIRDERSRASQSLAEAQKKFEEREAAALAKXXXMEDGRKAERETLAANLATAKSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAEEKGGLRRAAEDALRRVVDAKTRAEEEAALKAQATQDALNAQVRSWKAKAEAAGKRATEERDRGRRFEAGAQGALAQEVEKARESQERTIRELRTKSEADRAAHAEELERIKEEHRANILRVHQDKKRLSEAARRQWEQEMEEVRADAAARIEDSAARSAAERAEALRRLRLAHDVEMRKAGRDILRLEREARRCQRQ-EPAGVVARSKSGSSSLSPLRPGAYSPKPLPEEAAVATS 904
            QQ ++ ER G +   EEE+  GD       ESA RVAELSRRI               +SQTRLFQEQLRGVR  AQQVARR I DER R  Q L E Q++FEE+E   +AK    E+  KAERE+L+A+ A AK E+                                 AEEKGGLRRAAEDALRR ++   R  EEAA KAQ  QD+L+AQ+RSWKAKAE A +RATEER++ R  EAG +G LAQEVEKA                 DRA HAEE+ER++EEHRA +LRVHQDKK L EAARRQWE+EM+E+R +A A+ ED+A R+ AER+EALRRLRLAHD EMRKAGRDILRLEREARR Q+Q EP+G+  RSK  +S+LSPL  G+YSP+PL  E ++ T+
Sbjct:  106 QQCFEDERAGGLAHSEEEEEDGDXXGDNEQESAGRVAELSRRIXXXXXXXXXXXXXXXRSQTRLFQEQLRGVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKEKGLVAKLELAEESWKAERESLSADTAAAKCEVEKCRRQARAAAEAARNTTKEALEKQRLDFQRGWAEEKGGLRRAAEDALRRAMEGNVREREEAATKAQTAQDSLDAQLRSWKAKAETAERRATEEREKRRGLEAGVKGVLAQEVEKAXXXXXXXXXXXXXXXXXDRATHAEEIERLQEEHRAGLLRVHQDKKSLFEAARRQWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRSQQQQEPSGMAPRSKEDNSTLSPLPRGSYSPRPLLSEVSIRTA 514          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD13_9PHAE7.980e-15343.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN2_ECTSI2.500e-9554.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 795..815
NoneNo IPR availableCOILSCoilCoilcoord: 577..597
NoneNo IPR availableCOILSCoilCoilcoord: 620..647
NoneNo IPR availableCOILSCoilCoilcoord: 846..866
NoneNo IPR availableCOILSCoilCoilcoord: 675..695
NoneNo IPR availableCOILSCoilCoilcoord: 744..793

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2663835..2671443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16671.1mRNA_C-linearis_contig9.16671.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2663305..2671831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16671.1 ID=prot_C-linearis_contig9.16671.1|Name=mRNA_C-linearis_contig9.16671.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=937bp
MATFCESWDSNWMDGSCAGLDENIDDHVVDAHAFEAALEPLPAWDGVEYS
AIGGNTTGRSSKNHATAVPPRRQHDWANSTPHTFKQDHGKIFDRLDLQTL
SLDHDEEGGDITGADSSVLRKSMLAGNIDVEVEKPLQSWSTRSPAPKQQG
SSPEPERTLTHLIRLHRTGSVVVERTASPRAPSAGAAAVGAPESGYGGFY
AEEERFWLERCPPAEPVAADRRDKETKAAVAAQWKTPLASSSPGTQAAVA
VGRAANYDYFSAEAAYRLSPRPQTAADPRYSNRENDGFVREGRGGNTTPS
SQRRPSFDRQGGGGGGFQDADNPPQPNPQPSRPPRRQVARDRRGGHAGEI
GRNRNTEQRRRRRSRSRSRSLRDAEAILHGVLEAVEGGLSTIEDPSPSRR
APGEDHVSALLQRVAEPCRGETPVRTSSKRGIRKQRNHGGSPSPVTINNQ
VRRHRKSTDSSDDASNHAPSSSSGSHSPLRVPPLQLRSSESARRKGTTMR
DLSSQQEYDHERGVMEAGEEEDAGGDESAVRVAELSRRIASRCLQLEQEC
STREQSQTRLFQEQLRGVRQTAQQVARRMIRDERSRASQSLAEAQKKFEE
REAAALAKIEQMEDGRKAERETLAANLATAKSELERTRRLAREAAEAGKN
DAEGALEKQRVDLQRACAEEKGGLRRAAEDALRRVVDAKTRAEEEAALKA
QATQDALNAQVRSWKAKAEAAGKRATEERDRGRRFEAGAQGALAQEVEKA
RESQERTIRELRTKSEADRAAHAEELERIKEEHRANILRVHQDKKRLSEA
ARRQWEQEMEEVRADAAARIEDSAARSAAERAEALRRLRLAHDVEMRKAG
RDILRLEREARRCQRQEPAGVVARSKSGSSSLSPLRPGAYSPKPLPEEAA
VATSCLDGVEAEGGFQALSSPGFGNSKAAENPGESV*
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