prot_C-linearis_contig9.16670.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16670.1
Unique Nameprot_C-linearis_contig9.16670.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length174
Homology
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BLAST of mRNA_C-linearis_contig9.16670.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 8.710e-15
Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = 0 
Query:    8 REALRGVEERIFDLLSSSCTPMSWADLLHRMLEVAAGKGETVLALKLVEAGAFGHADAMYDPIRNGHVGVVNMLLENGAQPTHRYSEDNTPL 99
            R ALRG EERIFDL + +CTP  WA L+   LE AAG+G   L  KLVEAGA     A++  +R GH  +   LLE+GA  +    E  TPL
Sbjct:    7 RGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAE-IGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPL 97
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKL4_ECTSI8.710e-1548.91Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 94..123
e-value: 0.034
score: 23.3
coord: 61..90
e-value: 970.0
score: 5.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 94..126
score: 13.304
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 71..141
e-value: 1.6E-10
score: 41.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 61..144
score: 21.057
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..150
e-value: 3.3E-21
score: 77.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 39..144
NoneNo IPR availablePANTHERPTHR24188ANKYRIN REPEAT PROTEINcoord: 39..144
NoneNo IPR availablePANTHERPTHR24188:SF33IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574 HOMOLOG-RELATEDcoord: 39..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2662609..2663130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16670.1mRNA_C-linearis_contig9.16670.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2661169..2663192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16670.1 ID=prot_C-linearis_contig9.16670.1|Name=mRNA_C-linearis_contig9.16670.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=174bp
MATLAVRREALRGVEERIFDLLSSSCTPMSWADLLHRMLEVAAGKGETVL
ALKLVEAGAFGHADAMYDPIRNGHVGVVNMLLENGAQPTHRYSEDNTPLH
VAAAAGELEIVRLLLLWGAEKDALNQRDRTPLLVAVQHEHGGVVAGPPEL
TPTFVLVKCTVRWKSPPRAGMWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf