prot_C-linearis_contig9.16667.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16667.1
Unique Nameprot_C-linearis_contig9.16667.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length337
Homology
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BLAST of mRNA_C-linearis_contig9.16667.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 3.400e-10
Identity = 77/234 (32.91%), Postives = 105/234 (44.87%), Query Frame = 0 
Query:  102 LMDMLPMNKPTTVNHLTKDGATPLYMASGYGNDKVVSLLLSPGARQPRPRRPAEIVKCPLEVAVSQLRFGVIRVLLDKGLDATGGSSVLPNAVNIAITGAKRQRALRMLLDAEGEARRPHLARSSF-NRTPMIGWAASSSSLPAVNMLLSASALETARDLFGRVPSDIIGRDLEGRRDGRSRASDAGARPGVPRAVLRVACAG---RGRHRAWRSSRPAGPVGARFACECTGRR 331
            L+ +L    P+TVN   K G T L  A+  G +  VS LLS GAR   P   A  +   L +AV      V+RVLLD+G+ A GG   +  A+  +I   +  R L+MLLD EGE +R   AR    + TP +  AA+  SL A ++LL A A E   +   +  S  +G  L   +            P    AV R+   G   R R  AW +     P  +   C   G R
Sbjct:  174 LLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARD-NPSLFANGIGS-LLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSIL-KRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKN----------PDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGR 394
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDZ2_ECTSI3.400e-1032.91Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 96..276
e-value: 3.5E-15
score: 57.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 110..268
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 120..265
score: 14.822
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 120..145
score: 10.419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2644064..2645085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16667.1mRNA_C-linearis_contig9.16667.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2643746..2646630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16667.1 ID=prot_C-linearis_contig9.16667.1|Name=mRNA_C-linearis_contig9.16667.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=337bp
MWERSFSPMASSSWQPWTTRRSIWRPDFWPRLSPPSPARRRTSAGGILWR
HHAPNFGDDNGGVGGKARDGEDVAGGRGRPGPGRRRRAASPSLHGVRRKT
LLMDMLPMNKPTTVNHLTKDGATPLYMASGYGNDKVVSLLLSPGARQPRP
RRPAEIVKCPLEVAVSQLRFGVIRVLLDKGLDATGGSSVLPNAVNIAITG
AKRQRALRMLLDAEGEARRPHLARSSFNRTPMIGWAASSSSLPAVNMLLS
ASALETARDLFGRVPSDIIGRDLEGRRDGRSRASDAGARPGVPRAVLRVA
CAGRGRHRAWRSSRPAGPVGARFACECTGRRGRDFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt