prot_C-linearis_contig9.16641.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16641.1
Unique Nameprot_C-linearis_contig9.16641.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length995
Homology
BLAST of mRNA_C-linearis_contig9.16641.1 vs. uniprot
Match: D7FYC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC8_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.100e-70
Identity = 413/986 (41.89%), Postives = 490/986 (49.70%), Query Frame = 0
Query:  110 EVKKERSALVQGEKHTSKNANGEFTAPQRLRRFRPV---------ATPPVSPY-SPSRKTAGL---SFSQGEDSSSLVSTTIGSCSLGSDHRHRGDNSASRSRRTPRLSREGSGNPVLEGEAQRLEALKRRRFMELQQMLAFQLRSLARQERDRLMAETARAREATAEAKRSKMLEAADRVRIARERSGQEREKEVERQAAVKXXXXXXXXXXXXXXXXXXXXQAEVAAERRAELAAQKAALLQARIDRGVRVRRAQRLRNERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIAARERELREEEVAELARERQEAARRKVEREAKRRAEEMEAKFLRAKEIALAREIRKQQETAKTRAERQKKEEHRKRMAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKERIKATRGQLSSQTAMQRKNLQGHFEALKDQFRGCDVRYGKIAAAVSAA------------------TTARGDSGPTTPATRHSNTATPRLGSPN-PRRAAKPAFRASSQSRSSYDSPR--------------EEGAEADSRPVPQSQMESSCYLSGASTASSLSL-----PHGGVDGRRRSPPRTKGATTPGK-TPRKLRKAASG--GGSRSGD----------VADLRKRYVYDDRNGNAV----STRVAKKTTT-----TPRNRKTRSEQA--IAAGHRGDGESGTP--AKHRGKEATRSTASTTTETGREIVAVSCDA-DDGYDEDKVLTATVTLLSXXXXXXXXXXXXXXXX--------------ATSDTEVLRARYDRELMAILEEEQAAESAREKALAAANARAKAAQARATYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------TVAAREEAQLKRELARERREASKRVMRVSEEYEKALEKLA 977
            +VKKERS LV+  KH        F         +PV          TPPVSPY SP RK       S + G+ SS        S   G      GDN +S        S  G GNPVLE EA RLEAL+RRRF+ELQQMLAF+LR LAR+ERDR +AE ARAREA AE KR+KM EAADR R+ARERS Q+REK  ER+AA +                    QA++AAERRAELAAQKAALLQ RIDRG RVRRA++LR ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +EI            AEL R R EAARRK+E +AKR+A+E+E K LR K +A                          RM ER                            EKER++ATRG+LSS+T  QRK LQGHFEALK+   G  + YG++AAAV+AA                      G + P   A R  N  TPR   P+ P   A  +      + S + +P               + GA A  R  P+           AS  +SLSL      HG     + +PP T  AT   + +PRK   +A    GGS SGD           A LR+ Y+YD R G  +    S R   +T T     TPR RK R  +A   AAG  G G  GT   A   G+E  R       ETGR  +A + D  + G D+ +   +  +  S      XXXXXXXXX               ++SD ++LR RYDREL+A+L EEQAAE AREKALAAA ARAKAAQARA Y G                                                                      VA R+  +L++ELA ERREAS+RV+RVSE YE+AL KL+
Sbjct:   13 QVKKERSNLVRAGKHPINGTTAVFATSAARPPTKPVPPTPRSRQFTTPPVSPYYSPRRKEDAFPSRSDNNGDGSSLASGAAWSSFECGDGSSVGGDNGSSSI-----ASAAGIGNPVLEAEAYRLEALRRRRFVELQQMLAFELRGLAREERDRQLAEKARAREAMAERKRAKMFEAADRARLARERSWQDREKISEREAAARRVVEDEAARRFDEQDRLRRTQAKLAAERRAELAAQKAALLQGRIDRGARVRRARQLRTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIAALEDRVASFRIRQKEIEEXXXXXXXXXAAELNRARHEAARRKIEGDAKRKADEVEGKVLREKRVAQXXXXXXXXXXXXXXXXXXXXXXXXDRMMERKAKADKERREAIRLKLEQDDAKVELLRLEKERLRATRGKLSSETTKQRKMLQGHFEALKEYSNGHSISYGELAAAVTAAGXXXXXXXXXXXXEPGGDRNCLGGANPAAAAARRPNATTPRAVRPSGPHHRADMSVARGGGADSLFPAPHSGSPRFPPPAQNDIKTGARA--RAAPRXXXXXXXXXXXASITTSLSLLVRDGSHGXXXXXK-TPPLTARATAHRRISPRKPSTSAGDRRGGSGSGDHRGARVDNPAAAGLREWYMYDTREGQKLVGRGSARGGTRTATASKAKTPRGRKNRLVKAKETAAGGLGHGRGGTTSSASETGRENRRP------ETGRRPLAEASDELESGSDDFEAYASMSSSYSTDANSTXXXXXXXXXLPSSRPSSPRGEPGASSSDADLLRGRYDRELLAVLAEEQAAEGAREKALAAAVARAKAAQARAGYVGGKRSSAAATGGQIKDGGCPESQGVSPMSGGEPDGVVATTARLAIAAAPGEGXXXXAVRGDGQDRREEEAAVATRDAIRLEKELATERREASERVLRVSEAYEEALRKLS 984          
BLAST of mRNA_C-linearis_contig9.16641.1 vs. uniprot
Match: A0A6H5JGL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL3_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.900e-58
Identity = 364/1000 (36.40%), Postives = 443/1000 (44.30%), Query Frame = 0
Query:  110 EVKKERSALVQGEKHTSKNANGEFTAPQRLRRFRPV---------ATPPVSPY-SPSRK--TAGLSFSQGEDSSSLVSTTIGSCSLGSDHRHRGDNSASRSRRTPRLSREGSGNPVLEGEAQRLEALKRRRFMELQQMLAFQLRSLARQERDRLMAETARAREATAEAKRSKMLEAADRVRIARERSGQEREKEVERQAAVKXXXXXXXXXXXXXXXXXXXXQAEVAAERRAELAAQKAALLQARIDRGVRVRRAQRLRNERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIAARERE-LREEEVAE------------LARERQEAARRKVEREAKRRAEEMEAKFLRAKEIALAREIRKQQETAKTRAERQKKEEHRKRMAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKERIKATRGQLSSQTAMQRKNLQGHFEALKDQFRGCDVRYGKIAAAVSAATTAR------------------GD------SGPTTPATRHSNTATPRLGSPN-PRRAAKPAFR----ASSQSRSSYD-SPREE---------GAEADSRPVPQSQMESSCYLSGASTASSLSL-----PHGGVDGRRRSPPRTKGATTPGK-TPRKLRKAAS----GGGSRSGD----------VADLRKRYVYDDRNGN----------AVSTRVAKKTTTTPRNRKTR--SEQAIAAGHRGDGESGTPAKHRGKEATRSTASTTTETGREIV------AVSCDA-DDGYDEDKVLTATVTLLSXXXXXXXXXXXXXXXX-------------ATSDTEVLRARYDRELMAILEEEQAAESAREKALAAANARAKAAQARATYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------TVAAREEAQLKRELARERREASKRVMRVSEEYEKALEKLA 977
            +VKKERS LV+   H        F         +PV          TPPVSPY SP RK  T     +   D +SL S    S             +AS S R    S  G GNPVLE EA RLEAL+RRRF+ELQQML F+LR LAR++RDR +AE AR REATAE KR+KM EAADR R+ARERS Q+REK  ER+AA +                    QA++AAERRA LAAQKAALLQ RIDRG RVRRA++LR E XXXXXXX                                                                       QE A  +   L + E+              L R R EAARRK+E +AKR+A+E+E K LR + IA  RE                       M ER                            EKER++ATRG+LSS+   Q K LQGHFEALKD   G  + YG++AAAV+AA                      GD      S P   A R  N  TPR   P+ P   A  +      A S S +++  SPR           GA A  R  P+         S AS  SSLSL      HG       +PP T  AT   + +PRK   +A     G G  SGD           A LR+RY+YD R G              T  A KT   PR RKT     + +AA   G G        RG+     T S+ +E+GRE +      A +CD    G D+ + +T+  +  S   XXXXXXXXXXXXX             ++SDT++LR+RYDREL+A+L EEQAAE  REKALAAA ARAKAAQARA Y G                                         XX                 VA RE  +L++ELA ERREAS+RV+RVS+ YE+A+ KL+
Sbjct:    6 QVKKERSNLVRAG-HPINGTTAVFATTAARPATKPVPATPRSRQFTTPPVSPYYSPRRKEDTFPSRSNNNGDGNSLASGAAWSSFDXXXXXXXXXXNASSSIR----SAAGIGNPVLEAEAYRLEALRRRRFVELQQMLTFELRGLAREKRDRQLAEKARTREATAERKRAKMFEAADRARLARERSWQDREKVAEREAAARRVAEDEAARRFDEQDRLRRTQAKLAAERRARLAAQKAALLQGRIDRGARVRRARQLRTEXXXXXXXXERDAAAETAKSTTVTPHSDCLVDEKRDTKKTRRARESEHEAKKAAAAERWAAARAGVEEARRRRDAATKTLQEKAGGQTAALEDREIXXXXXXXXXXXXXXLNRARHEAARRKIEGDAKRKADEIEGKVLREERIAQQREXXXXXXXXXXXXXXXXXXXXXXXMMERKAKTDKERREAIRLKLEQDDAKVELLRLEKERLQATRGKLSSEMTKQWKMLQGHFEALKDHSNGHSISYGELAAAVTAAGVGTXXXXXXXXXXXXXXXEPGGDRNRLRGSDPAAVAARRPNATTPRAVRPSGPHHCADMSVARGGGADSLSPAAHSGSPRFPPPAQNDIITGARA--RAAPRPXXXXXXXXSVASITSSLSLLVRDGSHGXXXXXM-TPPLTARATAHRRISPRKPSTSAGDRRGGSGRGSGDQRGARVDNPAAAGLRERYMYDTRAGQKRVGGGGARGGTKTAAASKTNI-PRGRKTHLVKTKELAADGLGHG--------RGE-----TTSSASESGREKLHPERPLAGACDELGSGTDDAEAVTSMSSSYSTDAXXXXXXXXXXXXXXXXXXXXXXXXGASSSDTDLLRSRYDRELLAVLAEEQAAEDDREKALAAAVARAKAAQARAGYIGRKVKRGRCPEGQGVSPMSGGEPDGVVATTARLAIAAAPVEGXXXXAVRGVEQDRREEEAAVATREAIRLEKELATERREASERVLRVSDAYEEAIRKLS 983          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYC8_ECTSI1.100e-7041.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGL3_9PHAE2.900e-5836.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..264
NoneNo IPR availableCOILSCoilCoilcoord: 441..542
NoneNo IPR availableCOILSCoilCoilcoord: 309..329
NoneNo IPR availableCOILSCoilCoilcoord: 357..384
NoneNo IPR availableCOILSCoilCoilcoord: 937..975
NoneNo IPR availablePANTHERPTHR38019FAMILY NOT NAMEDcoord: 437..882
NoneNo IPR availablePANTHERPTHR38019:SF1coord: 437..882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2269413..2275598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16641.1mRNA_C-linearis_contig9.16641.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2268986..2275899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16641.1 ID=prot_C-linearis_contig9.16641.1|Name=mRNA_C-linearis_contig9.16641.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=995bp
MGMLRSIEVGSPPVATMAPVDGSGGGFSLDSPRSIEACRRRGLEDSDLEE
RSEESFFRHGQPQQKLHRLSKSRSPVAGGEKSTEGQGRAGMTAVIRKERH
VIKRHRLLREVKKERSALVQGEKHTSKNANGEFTAPQRLRRFRPVATPPV
SPYSPSRKTAGLSFSQGEDSSSLVSTTIGSCSLGSDHRHRGDNSASRSRR
TPRLSREGSGNPVLEGEAQRLEALKRRRFMELQQMLAFQLRSLARQERDR
LMAETARAREATAEAKRSKMLEAADRVRIARERSGQEREKEVERQAAVKR
ARQQEAVRRLEAQDHLRQMQAEVAAERRAELAAQKAALLQARIDRGVRVR
RAQRLRNERLAAQKADEREAAAEAARRARESENKTRKAAAAKKWATARAA
AEEARRRRDEEADAMRTTAGGKMAELEGRVASFRDRQQEIAARERELREE
EVAELARERQEAARRKVEREAKRRAEEMEAKFLRAKEIALAREIRKQQET
AKTRAERQKKEEHRKRMAERRAKAEEERREMTRRKLEEDAAKIELVRSEK
ERIKATRGQLSSQTAMQRKNLQGHFEALKDQFRGCDVRYGKIAAAVSAAT
TARGDSGPTTPATRHSNTATPRLGSPNPRRAAKPAFRASSQSRSSYDSPR
EEGAEADSRPVPQSQMESSCYLSGASTASSLSLPHGGVDGRRRSPPRTKG
ATTPGKTPRKLRKAASGGGSRSGDVADLRKRYVYDDRNGNAVSTRVAKKT
TTTPRNRKTRSEQAIAAGHRGDGESGTPAKHRGKEATRSTASTTTETGRE
IVAVSCDADDGYDEDKVLTATVTLLSSSTTIPNSTVSPPPPPATSDTEVL
RARYDRELMAILEEEQAAESAREKALAAANARAKAAQARATYGGASTSKR
RKRGGSGGPPPAAGEKASPVTGYGGGRDLQRRREEEATVAAREEAQLKRE
LARERREASKRVMRVSEEYEKALEKLATGNKTVRSPSAEQLAAG*
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