prot_C-linearis_contig9.16603.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16603.1
Unique Nameprot_C-linearis_contig9.16603.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length116
Homology
[Close]
BLAST of mRNA_C-linearis_contig9.16603.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 4.060e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:   32 TLFDAAAQGGHAEIVSGLLDAGAQPDVNVVSAPSRLSALYLATDLGYEDAARCLVRAGAGVNYRTLSVGVMSC 104
            TL DAAA GG   +VS LL AGAQPDVNVVS  S+ S+LY AT  G++DAAR L+ AGA VN+   +  ++ C
Sbjct:   71 TLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTGSILGC 143
[Close]
BLAST of mRNA_C-linearis_contig9.16603.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.140e-11
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = 0 
Query:   32 TLFDAAAQGGHAEIVSGLLDAGAQPDVNVVSAPSRLSALYLATDLGYEDAARCLVRAGAGVNY 94
            TL DAAA GG   +VS LL AGAQ DVNVVS  S+ SALY AT  G+EDAAR LV AGA V++
Sbjct:   71 TLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDF 133
[Close]
BLAST of mRNA_C-linearis_contig9.16603.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.570e-11
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:   32 TLFDAAAQGGHAEIVSGLLDAGAQPDVNVVSAPSRLSALYLATDLGYEDAARCLVRAGAGVNY 94
            +L DAAA GG+ ++VSG L+AGA+PDV VVS  S+ SAL      G+ED AR LV AGA VN+
Sbjct:  114 SLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNF 176
[Close]
BLAST of mRNA_C-linearis_contig9.16603.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 5.680e-9
Identity = 43/73 (58.90%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   15 DRSWGGRECGMEALPRPTLFDAAAQGGHAEIVSGLLDAGAQPDVNVVSAPSRLSALYLATDLGYEDAARCLVR 87
            D S G R C    L R TL DAAA GG   +VS LL AGAQPDVN VS  S+ SALY AT  G+E AAR L R
Sbjct:   59 DGSAGWRGC----LDR-TLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDR 126
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRZ8_ECTSI4.060e-1456.16Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LS36_ECTSI1.140e-1165.08Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JW91_9PHAE1.570e-1157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRS0_ECTSI5.680e-958.90Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 29..60
e-value: 12.0
score: 14.9
coord: 65..94
e-value: 9.7
score: 15.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 22..100
e-value: 5.9E-11
score: 44.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 35..97
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 29..97
score: 11.745

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1778828..1779175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16603.1mRNA_C-linearis_contig9.16603.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1778655..1779597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16603.1 ID=prot_C-linearis_contig9.16603.1|Name=mRNA_C-linearis_contig9.16603.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=116bp
MPPRTATSRSLQRTDRSWGGRECGMEALPRPTLFDAAAQGGHAEIVSGLL
DAGAQPDVNVVSAPSRLSALYLATDLGYEDAARCLVRAGAGVNYRTLSVG
VMSCSRQLDVGVGSW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom