prot_C-linearis_contig9.16594.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16594.1
Unique Nameprot_C-linearis_contig9.16594.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length496
Homology
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 1.240e-145
Identity = 261/335 (77.91%), Postives = 292/335 (87.16%), Query Frame = 0
Query:    1 MASLTDPKP--LEAAIAAAAKIRQRRSSSSMNNATATLRVSISDVVNINGKERQSAEKSRRGSAENLXAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALEAVGDAGPIEKLQALLTRAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARSRLNNVESKDDLNVAARKVGRRRSSLRAIPIGKLVHQQGSRFFWRSTETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEAVARADSIGQFDRMDQEERQEATTEAMTALWVEYLQHR 333
            MASL+DPK   +E+  AA  + RQRRSSSS+NNATAT+RVS+S VVN+NGK+ Q AEK+RR SA   X  XXXXXXXXXXXXXXXXXXXXXXXXX   AAA+EA GD  P+EKLQ LLT+AKE+GMSAERLFEHFAP GEASVTP MFE+ALRKLGQRAFDLDEMELEHLVT FDTDGNGTVELDEFMTFCLSIPSLPWRAEKAR RLNN ESKD+LNVAARK+ RRRSSLRA+PIG+LVHQ GSRFFWRS ETIDVA H N+DEGL+TISTR  ERGYNY AIFVD +KIPV K+EAVARA+++GQF+ M ++ER+EAT +AMTAL VEYLQHR
Sbjct:    1 MASLSDPKGTGMESPSAAVPRARQRRSSSSINNATATMRVSVSGVVNVNGKDSQEAEKNRRESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAAVEAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGGEASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKAR-RLNNAESKDELNVAARKIARRRSSLRAVPIGELVHQ-GSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAVGQFESMSKDERREATDKAMTALRVEYLQHR 333          
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.110e-65
Identity = 151/412 (36.65%), Postives = 212/412 (51.46%), Query Frame = 0
Query:  108 PIEKLQALLTRAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARSRLNNVESKDDLNVAARKVGRRRSSLRAIPIGKLVHQQGSRFFWRSTETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEA--------------------------VARADSIGQFDRMDQEERQEATTEAMTALWVEYLQHRLKVPDEVNEPKEAEXXXXXXXXXALNATESEGSSISASDDGKGERKKSGRAVVVPGTGGGTTSSMVARTTKPGEMTPQQRADDKAKHRPFLVKLSTDKWDSLLCARNIVLQTPHRFEAAARKTSMADFRRASLEFGLLAKETEILSTVAERKTRKVGASI 493
            P+EKLQALLT AKE+GMSAERLFE FAP G A++T   FE ALR+L  + F L   EL+ L+  FD + NG +EL EFM FC++IPSL W+AE+AR R++ V+  + L  AAR   RRRS+ +A+ +G+ +H +   FFWRS + +DV  H N  EG++ ISTRS +R   +  IFV+A++IP+ +++                           +A+     + + +  +ER E        L  EYL +RLKVPD+ N+P                     G S +A    +    KS  A  +                              A   PFL +LSTD   S+LC R +++  P+RF  A R+ S+ DFRRASLE   L  ET  L  VAE K  + G ++
Sbjct:   30 PLEKLQALLTAAKERGMSAERLFEFFAPAGSATMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERAR-RMSAVDGPEALTEAARNSERRRSTCKAVDLGEKIHDR-KMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIARAQINKAVDDKELSVVDKRQAFPPQSHHAQIAKRQEGSRQEPISTQERAELYEATRKELISEYLLNRLKVPDDANKPP--------------------GLSAAAKSPKRSTSPKSVAAAAM------------------------------AAEAPFLQRLSTDGAGSVLCTRGLMVSKPYRFPTA-RRGSVDDFRRASLELQRLVGETSGLIDVAEAKAEEAGRTV 388          
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 8.120e-15
Identity = 105/426 (24.65%), Postives = 180/426 (42.25%), Query Frame = 0
Query:  105 DAGPIEKLQALLTRAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARSRLNNVES-----KDDLNVAARKVGRRRSSLRA----------IPIGKLVHQQGSRFFWRSTETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEAV-------ARADSIGQFDRMDQEERQEATTEAMTALWVEYLQHRLKVPDEVNEPKEAEXXXXXXXXXALNATESEGSSISASDDGKGERKKSGRAVVVPGTGGGTTSSMVARTTK------PGEMT-PQQRADDK---AKHRPFLVKLSTD---KWDSLLCARNIVLQTPHRFEAAARKTSMADFRRASLEFGLLAKETEILSTVAERKTRKVGASIDS 495
            D+ P+E +++++ R KE G +  +LF  F                                   + TFDTDG+GT+EL EF+ +CL I ++ W+AE+ R       S     + D  +   +   R +   A           P+G L+++ GS+ FWR+ E++ +A H N ++  I IST        +  + VD+  I V   +AV         AD  G+  R+ ++ R +   +A  ++  +YL  RLK+ D     ++A+           NAT+++ S+ + S        + G   V PGT   + S+  A  T       PGE++ P  ++D         P +VKL  D   +  S L    +V    H F   ++  S  DF+R   E     K+       A++  R+   S+++
Sbjct:  105 DSTPVEAMRSIMVRGKEHGWTTSQLFGVF-----------------------------------LETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYE-GSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADK-GEIQRLPEDARAKLFDKARASVLSDYLLARLKLID----GRDADG----------NATDTQASAAAIS-----AAARLGLGGVGPGTAPESASTARAPETPAEPVEPPGEVSLPVTKSDSIFPIGTPTPVVVKLPEDDGGESGSFLLEDELVFSELHTF---SKHVSYKDFKRVENEVSEGLKDGHDRIENADKAQRRAHGSLEN 471          
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN)

HSP 1 Score: 79.0 bits (193), Expect = 3.940e-12
Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 0
Query:  116 LTRAKEKGMSAERLFEHFAPDG---EASVTPAMFETALRKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKAR 203
            ++ AKEKG+  +++F++F  +G   +  +TP  FE A++KLG   + +   EL  L+  FD D NGTV ++EF+ +CL IP+L W+AEK R
Sbjct:    1 MSNAKEKGLRVDQIFKYFKSEGAGDDDDITPDDFEAAMKKLG---WSISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLR 88          
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.260e-9
Identity = 60/225 (26.67%), Postives = 102/225 (45.33%), Query Frame = 0
Query:  141 VTPAMFETALRKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARSRL--NNVESKDD--LNVAARKVGRRRSSLR----------------AIPIGKLVHQQGSRFFWRSTETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEAVARADSIG------QFDRMDQEERQEATTE-AMTALWVEYLQHRLKVPD 338
            +T A F+  L  LG   F++   E   +    D +G+G+++L EF  FCL IPS+ W+AE+AR  +  NN     D  L  AAR +     S                   + +GK+ ++ G +FFWR+ + I+V    N  +G + I   +       +   + A ++      A+  + S G      +    DQ++  +A +E A  A   +Y+ HR+ +PD
Sbjct:  297 ITSASFQHGLATLG---FNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYR-GEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAE--ILNDLKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPD 515          
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Match: A0A7S2D074_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D074_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.630e-5
Identity = 59/216 (27.31%), Postives = 98/216 (45.37%), Query Frame = 0
Query:  108 PIEKLQALLTRAKEKGMSAERLFEHFAPD-GEASVTPAMFETALRKL--GQRAFDLDEMELEHLVTTFD----TDGNGTVELDEFMTFCLSIPSLPWRAEKAR-------SRLNNVE------SKDDLNVAARKVGRRRSSLRAIPIGKLVHQQGSRFFWRSTETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEAVARADSI 303
            P+EKL  ++++AKE G S E +F  F  + GE +     FE  L+KL  GQ A D D+   +     FD       NG V+L EF  + L + ++ W+AE+ R       S LN         S D++      V +  +      I ++ H  G +FFWRS   +++ F        I ++    +   N   IF+ + +I +  + + A  +S+
Sbjct:   94 PVEKLDLIMSKAKESGKSYEAIFNEFRHENGEINFED--FEIGLKKLIKGQTA-DPDDTATKEFRVMFDYLDDNQSNG-VDLKEFQEYALKMKNVSWKAERIRQSNDFPGSLLNKAVVNPATFSNDEIKTKTCVVDKHHTDT----ITEVYH--GPKFFWRSQTKLELVFTQYEITNCIVVTAFHEKLQVNLDPIFLKSDQIMLVAARSEADHESV 299          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSJ9_ECTSI1.240e-14577.91EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA2.110e-6536.65EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D8LCP2_ECTSI8.120e-1524.65EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
F0XWQ4_AURAN3.940e-1241.76EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
D7G5R3_ECTSI1.260e-926.67EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2D074_9STRA1.630e-527.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableGENE3D1.10.238.10coord: 93..328
e-value: 6.7E-12
score: 47.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 140..188
e-value: 1.1E-8
score: 34.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 121..156
score: 6.117
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 160..195
score: 10.971
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 173..185
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 127..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1680405..1686799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16594.1mRNA_C-linearis_contig9.16594.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1680405..1686799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16594.1 ID=prot_C-linearis_contig9.16594.1|Name=mRNA_C-linearis_contig9.16594.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=496bp
MASLTDPKPLEAAIAAAAKIRQRRSSSSMNNATATLRVSISDVVNINGKE
RQSAEKSRRGSAENLRAQRRKSSLMQMGVASVVMKDMASGVLRDEAAAAL
EAVGDAGPIEKLQALLTRAKEKGMSAERLFEHFAPDGEASVTPAMFETAL
RKLGQRAFDLDEMELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAE
KARSRLNNVESKDDLNVAARKVGRRRSSLRAIPIGKLVHQQGSRFFWRST
ETIDVAFHHNSDEGLITISTRSLERGYNYLAIFVDAAKIPVPKSEAVARA
DSIGQFDRMDQEERQEATTEAMTALWVEYLQHRLKVPDEVNEPKEAEGEG
EGEGQAALNATESEGSSISASDDGKGERKKSGRAVVVPGTGGGTTSSMVA
RTTKPGEMTPQQRADDKAKHRPFLVKLSTDKWDSLLCARNIVLQTPHRFE
AAARKTSMADFRRASLEFGLLAKETEILSTVAERKTRKVGASIDSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair