prot_C-linearis_contig9.16591.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16591.1
Unique Nameprot_C-linearis_contig9.16591.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length211
Homology
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Match: D8LSK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK3_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 4.190e-98
Identity = 165/215 (76.74%), Postives = 178/215 (82.79%), Query Frame = 0
Query:    1 MQVICFTVLCALLVVITSVEGFGMNAQRSSFHR----TITSRSTHVSRPAGRRSSGTSMFFDFGKKKEEGSNARPVAGGTVKGGKKTKITQEVSPAQLRAQEKAAAIRERSRIA--KKTEGVFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARVPGQSAAACKRVAESMLFEAAVGTKSNYFGGYVETIETPDYVDPEADIMFKINKFFGRGKK 209
            MQ  C  +LCA++ +IT VEGF   + R S H     T  SRS   SR   RRSS T MFFDFGKK E  SNARP+AGGTVKGGKKTKITQ+V+PAQ RAQEKA AIRERSR A  +K+EGVFTPPQ FEAFKKARKEVPSGKG+AYWEKIAARVPGQ+AAACKRVAESMLFEAAVGTKSNYFGGY+ETIETPDYVDPEADIMFKINK FGRGKK
Sbjct:    1 MQATCIALLCAVVAMITCVEGF---STRPSLHTHRAATTASRSLQASRAGSRRSSQTRMFFDFGKKTE--SNARPMAGGTVKGGKKTKITQDVTPAQRRAQEKATAIRERSRKASTRKSEGVFTPPQ-FEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 209          
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Match: A0A835YZY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.990e-34
Identity = 79/162 (48.77%), Postives = 101/162 (62.35%), Query Frame = 0
Query:   53 TSMFFDFGKKKE-EGSNARPVAGGTVKGGKKTKITQEVS---PAQLRAQEKAAAIRERSRIAKKTE-GVFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARVPGQSAAACKRVAESMLFEAAVGTKSNYFGGYVETIETPDYVDPEADIMFKINKFFGRGKK 209
            T M F  G  K    +++RP AG T KG KKT +  + S   PA +  + KA AI  +    K  E GVF+P +Q+E F  AR  VPSG  N YW++IA +VPGQ+A  CK++A  +LFE A GTK N+FGGYVETIE  DYVD +AD+M K+   F  GKK
Sbjct:   44 TQMVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPA-VERRRKAQAIAAKKAAEKAAEAGVFSP-EQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKLANMFSFGKK 202          
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Match: A0A835YSA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.450e-31
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 0
Query:   55 MFFDFGKKKE-EGSNARPVAGGTVKGGKKTKITQEVS---PAQLRAQEKAAAIRERSRIAKKTE-GVFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARVPGQSAAACKRVAESMLFEAAVGTKSNYFGGYVETIETPDYVDPEADIMFKI 200
            M F  G  K    +++RP AG T KG KKT +  + S   PA +  + KA AI  +    K  E GVF+P +Q+E F  AR  VPSG  N YW++IA +VPGQ+A  CK++A  +LFE A GTK N+FGGYVETIE  DYVD +AD+M K+
Sbjct:    1 MVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPA-VERRRKAQAIAAKKAAEKAAEAGVFSP-EQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKL 148          
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Match: W7TIQ4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIQ4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.920e-16
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  112 KTEGVFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARVPGQSAAACKRVAESMLFEAAVGTKSNYFGGYVETIETPDYVDPEADIMFKINKFFG 205
            K EG FT  +Q +A + AR+EVPS   + YW+KIA++VPGQ+A  CK +   +L + A GT  N+FGGYVE  ET   VD EA +  ++   FG
Sbjct:  124 KLEGYFTN-EQLQALEVARREVPSSAAS-YWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFG 215          
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Match: A0A7S2X777_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X777_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 1.430e-11
Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 0
Query:  116 VFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARV-PGQSAAACKRVAESMLFEAAVGTKSNYFGGYV----ETIETPDYVDPEADIMFKINKFFG 205
            VFT  +Q   F +ARKE+PSG G+AYW+K+A RV  G +A  CKR+A++ LF+ A GT SN+F  +V    E +E+    +  AD M ++  F+G
Sbjct:   91 VFTD-KQVARFLQARKELPSGSGDAYWQKVADRVGDGITAYECKRLAQNQLFKKAAGTSSNFFKNFVDVKGEYVESGYVDETAADPMTQMKNFWG 184          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSK3_ECTSI4.190e-9876.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY5_9STRA7.990e-3448.77Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YSA5_9STRA6.450e-3149.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TIQ4_9STRA8.920e-1646.81Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2X777_9EUKA1.430e-1144.21Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 120..163
e-value: 5.5E-5
score: 25.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.901
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1653707..1656222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16591.1mRNA_C-linearis_contig9.16591.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1653617..1656222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16591.1 ID=prot_C-linearis_contig9.16591.1|Name=mRNA_C-linearis_contig9.16591.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp
MQVICFTVLCALLVVITSVEGFGMNAQRSSFHRTITSRSTHVSRPAGRRS
SGTSMFFDFGKKKEEGSNARPVAGGTVKGGKKTKITQEVSPAQLRAQEKA
AAIRERSRIAKKTEGVFTPPQQFEAFKKARKEVPSGKGNAYWEKIAARVP
GQSAAACKRVAESMLFEAAVGTKSNYFGGYVETIETPDYVDPEADIMFKI
NKFFGRGKKE*
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