prot_C-linearis_contig9.16589.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig9.16589.1 vs. uniprot
Match: D8LSK7_ECTSI (Non-structural maintenance of chromosomes element 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK7_ECTSI) HSP 1 Score: 280 bits (715), Expect = 1.180e-93 Identity = 141/189 (74.60%), Postives = 166/189 (87.83%), Query Frame = 0
Query: 6 LKEPLQAFAQIIMAKKVMSNDEAQKALDASYERFGQLGFDLGGAISKVDKMLSAMDMGVRSMKAAGPGGEIYHCFVNKTADEIAKLHGSKLADWQIKVFKGIIEKFGQVQEEEKLELMELQELAPHIKSETGN--KKEMIKLFADQLVEDYWLSRPGNDVYYRLGVRTYVELPELLKSFQLEVPQVIYH 192
L+EPLQAFAQI+MA+KVMS DEAQKALD SY+RFG+L F L AISKVDKMLS+MDMGVRSMKA+GP G IYHCF+NKTADEIAKLHGSKL DWQ+K F+G+IEKF + EE++LEL++LQ L HIK++ K+EMIK FADQLV+D+WL+RPGNDV+YRLGVRTYVELPELLK+F LEVPQVI+H
Sbjct: 4 LREPLQAFAQILMARKVMSQDEAQKALDVSYQRFGELAFTLDEAISKVDKMLSSMDMGVRSMKASGPNGLIYHCFINKTADEIAKLHGSKLEDWQVKAFRGMIEKFAK-SEEQQLELLDLQGLTEHIKTKEAESTKREMIKSFADQLVDDFWLTRPGNDVFYRLGVRTYVELPELLKTFDLEVPQVIHH 191
BLAST of mRNA_C-linearis_contig9.16589.1 vs. uniprot
Match: A0A7S2VZL5_9STRA (Non-structural maintenance of chromosomes element 1 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2VZL5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.800e-18 Identity = 62/188 (32.98%), Postives = 101/188 (53.72%), Query Frame = 0
Query: 11 QAFAQIIMAKKVMSNDEAQKALDASYERF--GQLGFDLGGAISKVDKMLSAMDMGVRSMKAAGPGGEIYHCFVNKTADEIAKLHGSKLADWQIKVFKGIIEKFGQVQEEEKLELMELQELAPHIKSETGNKKEMIKLFADQLVEDYWLS----RPGNDVYYRLGVRTYVELPELLKSFQLEVPQVIYH 192
QAF Q+++A +V+S ++AQ L+A +R G L DL + +V++ L MD+ VR+M A P E H VN AD+IA+ HGSK+ +I+ F+ I G+ E+K + G+ + + + +V+ WL+ R G R+ R+++E+P+LL+S +E PQ IYH
Sbjct: 24 QAFLQMLLAARVVSENKAQSMLEAVRDRMEAGSLPGDLETTLKRVNRALKLMDLEVRTM--ALPQQERVHAVVNLAADDIAEKHGSKMQHNEIRAFRNAISIIGECDGEDKWAAL-------------GDLNKADQAVVEDMVQRGWLAVDSQRRG-----RIAARSFLEIPDLLESHGIERPQFIYH 191 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig9.16589.1 ID=prot_C-linearis_contig9.16589.1|Name=mRNA_C-linearis_contig9.16589.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=193bpback to top |