prot_C-linearis_contig9.16571.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16571.1
Unique Nameprot_C-linearis_contig9.16571.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length542
Homology
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: A0A6H5L2A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A9_9PHAE)

HSP 1 Score: 729 bits (1881), Expect = 1.210e-259
Identity = 412/559 (73.70%), Postives = 443/559 (79.25%), Query Frame = 0
Query:    1 MVPRRRKLMVGALTLLSCSGPTLSFLPSTTHTAA-------VSSSRGLPTAAVDPARSQHRQRRERTHGLPG-----------GDKQEKIRSSLRAPTVADRSSSGIKGLRMMAPAAAAXDXGXXXXXXXXXXXXXDAPTRSSSGIATPTTPLQDXXXXXXXXXXXXXDELPLTLDKALEEGVNRAMRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVEEELRGLGNLLSEPRMSVSASLDGARRLEWIGSGTWPLPWLPRFIVRGASTIETGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVIKRTLGYSIREYAPRLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITWTVPVPTAMGLDVKPLPEPPSERERGEDQRSRHVRQGPRRIAVANFNGIPQDPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLAMSILYHRPKYIGVGNEVFVELDDEEAVTGEVVDGKVGGGSW 541
            MVPRRR+    ALTL+SCS PTL+FLPST HTAA          +  + TAA   ARS+ RQ + RT  L             GD +E  R + R      R S+   G          X X XXXXXXXXXXXXX                     XXXXXXXXXXX ELPLTLDKALEEGVNRAMRGD GVLRQVLAPGVEWRGPLG+N GLAKVEEELRGLG+LLS PRMSV AS DGA+RLEWI SGTWPLPWLPRFIV+GAS ++TG DGKVV ITDTWEGNP++LGL+HLVPGFWDIWHQLGSPPAEK PYRV+KR LGY IREYAPRL TQPSL DYSNSREIRKALILPGFCHDG++KTSGRKPDEYYVTGP+EVAIQPFIATGNFPNGTWFNGT REASQSRRANRITWTVP+PTAMGLD   LPEPPSERERGEDQRSRHVRQG RRIAV NFNGIPQDPEAAEVRAKL+K LAADG+ P+KG DGR+RSGILMHNSVACF K GKLAMSILYHRPKYIG+GNEVFVELD EEAVT EVV+GKVGGG+W
Sbjct:    1 MVPRRRRAFTAALTLVSCSCPTLAFLPSTPHTAAXXXXXXXARRAGNIATAADQVARSEPRQCQSRTRALAXXXXXXXXXXXRGDLEEGKRYNDRT----GRRSTATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXELPLTLDKALEEGVNRAMRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLSAPRMSVFASKDGAKRLEWIASGTWPLPWLPRFIVKGASKLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRLATQPSLIDYSNSREIRKALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTRREASQSRRANRITWTVPIPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPSKGADGRVRSGILMHNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVGGGTW 546          
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: D7FR29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR29_ECTSI)

HSP 1 Score: 677 bits (1747), Expect = 4.870e-242
Identity = 322/373 (86.33%), Postives = 346/373 (92.76%), Query Frame = 0
Query:  169 MRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVEEELRGLGNLLSEPRMSVSASLDGARRLEWIGSGTWPLPWLPRFIVRGASTIETGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVIKRTLGYSIREYAPRLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITWTVPVPTAMGLDVKPLPEPPSERERGEDQRSRHVRQGPRRIAVANFNGIPQDPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLAMSILYHRPKYIGVGNEVFVELDDEEAVTGEVVDGKVGGGSW 541
            MRGD GVLRQVLAPGVEWRGPLG+N GLAKVEEELRGLG+LL+ PR+SV AS DGA+RLEW+ SGTWPLPWLPRFIV+GAST++TG DGKVV ITDTWEGNP++LGL+HLVPGFWDIWHQLGSPPAEK PYRV+KR LGY IREYAPR+ TQPSL DYSNSREIRKALILPGFCHDG++KTSGRKPDEYYVTGP+EVAIQPFIATGNFPNGTWFNGT REASQSRRANRITWTVPVPTAMGLD   LPEPPSERERGEDQRSRHVRQG RRIAV NFNGIPQDPEAAEVRAKL+K LAADG+ P KG DGR+RSGILM+NSVACF K GKLAMSILYHRPKYIG+GNEVFVELD EEAVT EVV+GKVGGG+W
Sbjct:    1 MRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLNAPRLSVFASKDGAKRLEWVASGTWPLPWLPRFIVKGASTLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQPSLIDYSNSREIRKALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTTREASQSRRANRITWTVPVPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPAKGADGRVRSGILMYNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVGGGTW 373          
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: A0A835YSS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS2_9STRA)

HSP 1 Score: 313 bits (803), Expect = 7.440e-99
Identity = 160/382 (41.88%), Postives = 237/382 (62.04%), Query Frame = 0
Query:  152 ELPLTLDKALEEGVNRAMRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVEEELRGLGNLLSEPRMSVSASL---DGARRLEWIGSGTWPLPWLPRFIVRGASTIET-GADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVIKRTLGYSIREYAPRLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITWTVPVPTAMGLDVKPLPEPPSERERGEDQRSRH------VRQGPRRIAVANFNGIPQDPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLAMSILYHRPKYIGVGNEVFVELDD 523
            E PL L  AL  G+NRA+RGD+ VLRQVL+    W+GP+ S     K+EE+LR +G+ LS+PR +V+++    D    LEW+ S TWPLPW PR +++G + +    A G+++ + DTWE  P+   ++HL+PGFWDIW+Q  SP AE+ P++V++R  GY + ++APRLV +P+L D +NSR+ R A +LP F     + T GR P++Y+ T P+E  I P I T    N    NG+    S   RANRITW V VP + GL+   +P+P     RGE     +       RQ  R +AVAN+NG  QD EA E+RAKL++ L+ D      G +GR ++G +  +    F K G++++++  +RPK +G GN+V+VEL++
Sbjct:   21 ETPLELGPALTLGLNRAIRGDSSVLRQVLSDNCSWKGPVASYDSRNKIEEDLRNVGSFLSDPRFTVASTTPTGDATYSLEWLASATWPLPWTPRIVIQGRTLVRLDSAGGRIISMEDTWEEAPVQALIRHLLPGFWDIWNQFCSPIAERYPHKVLRRGRGYEVWQFAPRLVLRPTLVDRTNSRQARMAYVLPDFSFTSSVNTRGRVPEKYFTTSPIEAEITPLIETNTVSNE---NGSL--GSVQTRANRITWAVQVPASFGLEAGAMPDP-----RGEGYNPLNGDAIEFERQDRRVVAVANYNGSVQDKEAVELRAKLLEQLSMDKAKVALGPEGRPKAGFMSFDGKVGFNKQGRVSIAVYEYRPKILGKGNKVYVELEE 392          
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: A0A6V1P7S5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7S5_HETAK)

HSP 1 Score: 201 bits (510), Expect = 5.110e-55
Identity = 121/370 (32.70%), Postives = 183/370 (49.46%), Query Frame = 0
Query:  162 EEGVNRAMRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVEEELRGLGNLLSEPRMSVSASL----DGAR----RLEWIGSGTWPLPWLPRFIVRGASTIETGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVIKRTLGYSIREYAPRLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITWTVPVPTAMGLDVKPLPEPPSERERGE--DQRSRHVRQGPRRIAVANFNGIPQDPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLAMSILYHRPKYIGVGNEVFVEL 521
            E  +N+A++ +   LR+    G  W  P+ +    A +E+ L  +GN L +PR++V A+     DG       ++W+ + TWPLPW P   V G + +    +G++    DTWE +P  + L    P FWD +H    PPAE   YRV  R  GY +R+YAPRLV      D  N+RE R A  LP       +   G+ P+ +YVT P+EV+ +  +               +E    ++ N I W V +P A GL++  LP+P       E  D R  H   GPRR+AVA FNG  QD   ++ RA+L+     DG     G  GR +   L +++   F + G L ++   + P++   GNE+ +EL
Sbjct:   71 ENAINQALKTNLDPLRKFAVSGATWDNPVEAQKDRAGMEKLLLDVGNFLEDPRLTVHAARARGGDGGGGALVEVDWLKTATWPLPWRPPVQVFGRTVLRLDGEGRLAAAADTWEQSPYQVALGQCRPRFWDFYHFKAFPPAEFPAYRVAARGEGYEVRDYAPRLVVVGRTLDRVNTRETRAARTLPESMFSCTISMIGKIPERFYVTSPIEVSFRGKML--------------KEGDAQKKVNAIQWKVGLPKAFGLELGGLPDPDGRETAQEMQDDRVWHQVDGPRRVAVARFNGQNQDVGVSKARAELLAKAQEDGHELLLGNSGRPQFSFLQNDAKVGFKRTGGLGVA--GYEPRW-DTGNEIALEL 423          
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: A0A8J2SS52_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS52_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.330e-40
Identity = 122/380 (32.11%), Postives = 183/380 (48.16%), Query Frame = 0
Query:  159 KALEEGVNRAMRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVEEELRGLGNLLSEPRMSVSASLDGARRLEWIGSGTWPLPWLPRFIVRGASTIETGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVI---KRTLGYSIREYAP-RLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYV--TGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITWTVPVPTAMGLDVKPLPEPPSERERGEDQRSRHVRQGP---------RRIAVANFNGIPQDPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMH-NSVACFAKGGKLAMSILYHRPKYIGV-GNEVFVEL 521
            KAL+E    A+RGD+  LR+ LA  V W+  LG   G     + +   G+   +PR+ V +S D   R  W+ SGT P+ W PR +V G +TI T  DGKV  + D W+ +P  +GLQ + P FWD++    +P AE     V+   K ++G +    +P RL    SL D SNSR+ R A  LP F    D     R P +     T P+ V+I+        P                R  R+TW +P+PTA+GLD   LPE P + E  +      V + P         +    A+++G PQD  AA +R  L ++  A G++   G +G     +L    +   ++  G LA ++  + P ++ V GNE+ VE+
Sbjct:   80 KALDE----ALRGDSTHLREELASDVVWQHGLGEAKGAKAALKLVEEAGDFYDDPRLDVLSSSDNEFR--WLASGTQPVQWSPRVLVHGTTTI-TRQDGKVTRVIDRWDSSPTDIGLQQVAPKFWDVFDLWATPVAETPCEEVLNEFKFSMGQARLVRSPERLCLVCSLDDVSNSRKQRVASALPDFVFLADT----RSPTDVIAATTTPLSVSIEALPRVDGEP----------------RKRRVTWALPLPTALGLDFASLPELPRKAELNDGGLELGVAENPSLTYALQPAKLYVCASYSGDPQDAAAAPLRKALAEAAVAQGLSLVPGANGGAAPAVLRKWRAKLGYSDVGALAYAMESNAPSWVSVDGNELCVEV 432          
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Match: A0A8J5XYQ7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYQ7_DIALT)

HSP 1 Score: 112 bits (280), Expect = 3.460e-23
Identity = 99/337 (29.38%), Postives = 150/337 (44.51%), Query Frame = 0
Query:  207 GNLLSEPRMSV-SASLDGAR--RLEWIGSGTWPLPWLPRFIVRGASTIE-----TGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYRVIKRTLGYSIREYAPRLVTQPSL---TDYSNSREIRKALILPGFCHDGDLKTSGRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRAN---RITWTVPVPTAMGLDVKPLPEPPSERERGEDQRSRHVRQGPRRIAVANFNGIPQDPEAAEVRAK-LIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLAMSILYHRPKYIGVG-----NEVFVELDD 523
            G  L +P + V S S+ GA   R+EW+ SGTWPLPW PR +  G+S +E     TGA   VV +TDT + +P+ + +  L+P + D++    SPPAE +PYRV++    Y +R   P +  + +L   T  S++     A +LPGF   G       KP        V  A++P               T       R+A       WTVP+P+ +G D   LP  P      E+    ++    R +A     G  +   A    A+ L   L ADG+    G   R       +N  A F   G+LA++      +Y G       NE+ V++++
Sbjct:  106 GKFLVDPMLEVLSVSVTGASSARVEWLASGTWPLPWRPRALALGSSALELETLPTGAV-HVVRVTDTLQTSPVDVLVSQLLPNWEDVYSLYNSPPAELRPYRVVRAARTYELRWMPPGIALRCALRSATYPSSATHKLVAPLLPGFAFTG-------KP---LNNRAVWSAVRPI--------------TVEYDQSDRKAGGPCAYRWTVPLPSRLGTDRSALPPLPPVESGVEEME--YIALPARYVAARRLAGALESDGAVLAEAEQLAAQLRADGVRTVDGTPSRAAFQFCQYNFKAGFNLAGQLAIA------QYQGTAQPLRRNEILVDIEE 409          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L2A9_9PHAE1.210e-25973.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR29_ECTSI4.870e-24286.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSS2_9STRA7.440e-9941.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1P7S5_HETAK5.110e-5532.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SS52_9STRA3.330e-4032.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J5XYQ7_DIALT3.460e-2329.38Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 295..473
e-value: 8.2E-7
score: 29.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..541
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 8.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.693
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 165..267
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 289..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1474498..1478234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16571.1mRNA_C-linearis_contig9.16571.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1474396..1478706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16571.1 ID=prot_C-linearis_contig9.16571.1|Name=mRNA_C-linearis_contig9.16571.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=542bp
MVPRRRKLMVGALTLLSCSGPTLSFLPSTTHTAAVSSSRGLPTAAVDPAR
SQHRQRRERTHGLPGGDKQEKIRSSLRAPTVADRSSSGIKGLRMMAPAAA
AADDGSIGASAAAPAAPADAPTRSSSGIATPTTPLQDDDDDDDDDDDIDD
DELPLTLDKALEEGVNRAMRGDTGVLRQVLAPGVEWRGPLGSNVGLAKVE
EELRGLGNLLSEPRMSVSASLDGARRLEWIGSGTWPLPWLPRFIVRGAST
IETGADGKVVGITDTWEGNPLSLGLQHLVPGFWDIWHQLGSPPAEKQPYR
VIKRTLGYSIREYAPRLVTQPSLTDYSNSREIRKALILPGFCHDGDLKTS
GRKPDEYYVTGPVEVAIQPFIATGNFPNGTWFNGTAREASQSRRANRITW
TVPVPTAMGLDVKPLPEPPSERERGEDQRSRHVRQGPRRIAVANFNGIPQ
DPEAAEVRAKLIKSLAADGITPNKGKDGRIRSGILMHNSVACFAKGGKLA
MSILYHRPKYIGVGNEVFVELDDEEAVTGEVVDGKVGGGSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006917SOUL_haem-bd
IPR032710NTF2-like_dom_sf
IPR011256Reg_factor_effector_dom_sf