prot_C-linearis_contig9.16570.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16570.1
Unique Nameprot_C-linearis_contig9.16570.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length308
Homology
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A6H5L1H1_9PHAE (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H1_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 1.960e-195
Identity = 267/307 (86.97%), Postives = 291/307 (94.79%), Query Frame = 0
Query:    1 MAQRGAVQGQIFLDCFNPILENAIKPRLMDGKREPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRPVGFLSFVIFAQHVERGRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAQGRAFNRG 307
            MAQRG +QGQIFLD FNPILENAIKPRLM+GKREPCELKVSDFDD MYT+EVPPN+LSTLSLSIAINGW +ISSNGG+++LATKY+GM++PQ RPGH++T+T +LDNP VP EQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPP+AIPWRKNEVV +VPQADRV +IFAIDF+ESDERAIAKSFLMEFVDAQRVANNSPPCTFTPD PLEL+SMPMPP   PVGFLSFVIF QHV+RGRQEKT+TLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVL+RAVPEEEAKAKKTA+GR FNRG
Sbjct:    1 MAQRGVIQGQIFLDSFNPILENAIKPRLMEGKREPCELKVSDFDDVMYTVEVPPNNLSTLSLSIAINGWDQISSNGGSEVLATKYQGMISPQVRPGHNLTITTNLDNPTVPAEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPAAIPWRKNEVVYVVPQADRVTIIFAIDFTESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDAPLELKSMPMPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLSRAVPEEEAKAKKTAKGRTFNRG 307          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: D7FR30_ECTSI (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR30_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 5.770e-114
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0
Query:  127 MAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRPVGFLSFVIFAQHVERGRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAQGRAFNRG 307
            MAAPFDRAFDALREGRGGSVPP+AIPWRKNEVV +VPQADRV VIFAIDF+ESDERAIAKSFLMEFVDAQRVANNSPPCTFTPD PLEL+SMPMPP   PVGFLSFVIF QHV+RGRQEKT+TLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTA+GR FNRG
Sbjct:    1 MAAPFDRAFDALREGRGGSVPPAAIPWRKNEVVYVVPQADRVTVIFAIDFTESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDAPLELKSMPMPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAKGRTFNRG 181          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A835ZH76_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH76_9STRA)

HSP 1 Score: 244 bits (622), Expect = 7.640e-78
Identity = 125/181 (69.06%), Postives = 144/181 (79.56%), Query Frame = 0
Query:  126 LMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRPVGFLSFVIFAQHVERGRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAQGRAFNR 306
            ++ APF +AF +L  G+ GS+P   +PWRK+E V IVPQADRV VIFA+DF+E DERA+ K FLMEF DAQR ANN+PP  F  + PLELRS  +    +PVGFLSF+IF QHV+ GR E  VTLLTGFRNYLHYH+KATKTYMHMRMRKRVVGLLQVLNRAVPE E KAKKTAQG+ F R
Sbjct:    1 MLGAPFTKAFASLLGGQSGSLPMMTLPWRKSEDVFIVPQADRVTVIFALDFAEQDERALCKVFLMEFADAQRSANNAPPTNFALEAPLELRSARV--RGKPVGFLSFIIFPQHVQEGRLESCVTLLTGFRNYLHYHIKATKTYMHMRMRKRVVGLLQVLNRAVPEAEEKAKKTAQGKTFVR 179          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: T0RSJ4_SAPDV (Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSJ4_SAPDV)

HSP 1 Score: 232 bits (592), Expect = 1.430e-71
Identity = 133/306 (43.46%), Postives = 197/306 (64.38%), Query Frame = 0
Query:   11 IFLDCFNPILENAIKPRLMDGKR---EPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQ---LLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMP-MPPGQRPVGFLSFVIFAQHVER-GRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEE-AKA-KKTAQGRAFNR 306
            IFL+  + I++  ++ RL +      EP E+++ DFDD  Y L +  N   TLS+S++     E+   G A+MLA+ Y       P+PG  +T+ A++D  A+ PE    ++  ++ LKRNL++APFD  F AL      S+ P  IP+R+ E + ++PQADR+ ++F++ F +  ++AIA+ FL EF +A+R  NN+PP +F  DPPLELR +P +      VG+LSF IF  H++   ++ K  TL+ GFRNYLHYH+KA+KTYMH+RMRKRV  LLQVLNRA P ++ +KA KKT  G+ F+R
Sbjct:    2 IFLENESKIVQEVLQGRLGEAAPRPVEPLEIRLCDFDDVQYDLSIQEN---TLSVSMSYPPVVELVKFGAANMLASVYPEFTLTAPKPGFDLTMVANVD--AITPENATNVIDRISLLKRNLLSAPFDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDTDAKRAKACTLIQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDR 302          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A067CQD1_SAPPC (Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQD1_SAPPC)

HSP 1 Score: 230 bits (587), Expect = 8.090e-71
Identity = 133/306 (43.46%), Postives = 195/306 (63.73%), Query Frame = 0
Query:   11 IFLDCFNPILENAIKPRLMDGKR---EPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQ---LLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMP-MPPGQRPVGFLSFVIFAQHVER-GRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEE-AKA-KKTAQGRAFNR 306
            IFL+  + I++  ++ RL +      EP E+++ DFDD  Y L +  N   TLS+S++     E+   G A+MLA  Y       P+PG  +T+ A++D  A+ PE    ++  +  LKRNL++APFD  F AL      S+ P  IP+R+ E + ++PQADR+ ++F++ F +  ++AIA+ FL EF +A+R  NN+PP +F  DPPLELR +P +      VG+LSF IF  H++   ++ K  TL+ GFRNYLHYH+KA+KTYMH+RMRKRV  LLQVLNRA P ++ +KA KKT  G+ F+R
Sbjct:    2 IFLENESKIVQEVLQGRLGETAPRPVEPLEIRLCDFDDVQYDLSIQEN---TLSVSMSYPPVVELVKFGAANMLANVYPEFTLTAPKPGFDMTMVANVD--AITPENATNVIDRIALLKRNLLSAPFDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDSDAKRAKACTLVQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDR 302          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A024U441_9STRA (Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U441_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.460e-68
Identity = 128/309 (41.42%), Postives = 192/309 (62.14%), Query Frame = 0
Query:   11 IFLDCFNPILENAIKPRLMDGKR---EPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQ---LLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRP----VGFLSFVIFAQHVER-GRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAK--AKKTAQGRAFNR 306
            IFL+  + I++  +  RL +      +P E+++ DFDD  Y + +   +LS   +S+A   + E+   G A+MLA  Y       P+PG  +TL A++D   + P+    ++  +  LKRN++ AP D  F AL  G+   + P  IP+R+ E + I+PQ DR+ ++F++ F +  ++AIA+ FL EF +A+R  NN+PP +F  DPPLELR++    G RP    VG+LSF IF  H++   ++EK  TLL GFRNYLHYH+KA+KTY+H+RMRKRV  LLQVLNRA P ++    +KKT  G+ F+R
Sbjct:    2 IFLENESKIVQEVLLGRLGEAAPRPVDPLEIRLCDFDDVQYDISIQGTALS---VSMAYRPYIELQKFGAANMLAKVYPEFQVTAPKPGFELTLVANVDT--ITPQNAASVVNRIASLKRNILGAPLDHCFLALHAGQAKVLSPIQIPFRRQETIYILPQDDRIVIVFSVAFQDKTDQAIARVFLQEFAEARRHVNNAPPVSFGKDPPLELRAVS---GLRPCADHVGYLSFAIFKSHIDTDAKREKACTLLQGFRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRAQPPKDPTKTSKKTITGKTFDR 302          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A5D6XHZ0_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHZ0_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.070e-68
Identity = 127/308 (41.23%), Postives = 192/308 (62.34%), Query Frame = 0
Query:   11 IFLDCFNPILENAIKPRLMDGKR-----EPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQ---LLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMP-MPPGQRPVGFLSFVIFAQHVER-GRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEE-AKA-KKTAQGRAFNR 306
            +FLD  N IL++ +  R+  G +     +P E+++ DFDD  Y + +  N   TL++S+A   +K +   G   M A  Y       P+ G  + L  ++D   + P      +  +  LKRN+++APF++ F+AL +G G S+ P  IP+R++E + ++PQADR+ +++++ F +  ++AIA+ FL EFVD +R  NN+PP  F  DPPLELR+ P +P     VG+LS  IF  HV+   ++ K  +L+ G RNYLHYH+KA+KTY+H+RMRKRV  LLQVLNRA PE++ +KA KKT  GR F R
Sbjct:    2 LFLDNDNKILKDVLDGRI--GAKAARPVQPLEIRLCDFDDVQYDVSIANN---TLTISMAYPPFKYLEGLGAQRMFAVTYSEFSPVAPKAGFDLALQVNVD--VITPANAASFIDRIAALKRNILSAPFEQCFEALTQGTGASLTPVQIPFRRSETMYVLPQADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPAAFGKDPPLELRNAPGLPTSSDLVGYLSLAIFPSHVDSPAKRAKAASLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRAKPEKDPSKANKKTITGRTFER 302          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A8K1FEV5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEV5_PYTOL)

HSP 1 Score: 221 bits (562), Expect = 4.540e-67
Identity = 125/309 (40.45%), Postives = 195/309 (63.11%), Query Frame = 0
Query:   11 IFLDCFNPILENAIKPRLMDGKR---EPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQ---LLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRP----VGFLSFVIFAQHVERG-RQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEA--KAKKTAQGRAFNR 306
            +FL+  N I+++ ++ RL +      EP E+++ DFDD  Y + +  N   TLS+S+A   +K ++  G  +ML+  Y        + G  +TL A++D+  + P     ++  +  LKRN+++APF++ F+AL+ G    +    IP+R+NE + ++PQADR+ +++++ F +  ++AIA+ FL EFVD +R  NN+PP  F+ DPPLELR  P   G R     VG+LS  IF  HV+   ++ K  +L+ G RNYLHYH+KA+KT++H+RMRKRV  LLQVLNRA PE++   +AKKT  GR F+R
Sbjct:    2 LFLESENKIIKDVLEGRLGEKAPRPVEPLEIRLCDFDDVQYDISIANN---TLSVSLAYAPYKHVAPLGAQNMLSKTYPEFQVVASKSGFDLTLQANVDS--ITPANAASVISRIALLKRNIISAPFEQCFEALKGGSASGLGAVQIPFRRNETMYVLPQADRIVIVYSVCFEDKTDQAIARVFLQEFVDTRRTVNNAPPVAFSKDPPLELRGAP---GLRNSADLVGYLSLAIFPTHVDTDEKRAKAASLVQGLRNYLHYHIKASKTHLHIRMRKRVDLLLQVLNRARPEKDPSKQAKKTISGRTFSR 302          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A8J2S8U6_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8U6_9STRA)

HSP 1 Score: 220 bits (561), Expect = 8.140e-67
Identity = 132/308 (42.86%), Postives = 187/308 (60.71%), Query Frame = 0
Query:   13 LDCFNPILENAIKPRLMDGKREPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVTLTADLDNPAVPPEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIV----PQA----DRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPD--PPLELRSMPMPPGQRPV--GFLSFVIFAQHVERGRQ-EKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAV-PEEEAKAKKTAQGRAFNR 306
            L+  + ILE A+  RL+DGKREPCE+  +DFDDA++ L V P   S L+L   +  +  +  +GGA  L T + G+V  QP  G+ V L+ + D  A P E L K L  +KR+L+ APF+ AF+AL  G    +P + +PWR+ E   IV    P +    DRV VIFA+DF E  ++A A+ FL +F +  R    +PPC F+    PP E++S+     + P   G++SFVIF  HV   ++ EKT  LL GFRNY+H+H+KA KT MHMRMR++V   +QV+NRAV   ++ +  KTA G+ F R
Sbjct:    8 LEPQSAILEEALGARLIDGKREPCEVSCADFDDALFKLVVLPGQESVLTLHAKLPCYDTLLEHGGARCLETTFAGLVT-QPENGYDVALSVNADECAAPTETLRK-LARIKRHLVGAPFEAAFEALVNGTARDLPVARLPWRRGESAYIVAGNDPASRDSWDRVTVIFAVDFREETDKAYARVFLQQFQERARALGGAPPCVFSEGSRPPREIQSVG---AESPTIAGYVSFVIFRSHVATPQKLEKTCDLLVGFRNYVHFHIKAAKTNMHMRMRRKVASWIQVVNRAVLTSDKPREMKTAGGKTFTR 310          
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Match: A0A7S0XD73_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XD73_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.760e-65
Identity = 118/303 (38.94%), Postives = 188/303 (62.05%), Query Frame = 0
Query:    6 AVQGQIFLDCFNPILENAIKPRLMDGKREPCELKVSDFDDAMYTLEVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGM-VAPQPRPGHSVTLT-ADLDNPAVPPEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSAIPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDPPLELRSMPMPPGQRPVGFLSFVIFAQHVERGRQEKTVTLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAQGRAFNR 306
            A +G +FLD  N IL   ++ RL++G R+ CE + SDFDD  Y +    +++    ++I++ G  E+ S+G   ++   + G+ V P P+   ++    + + NP    ++LL  ++ELKRNL++ P + AFDAL       +P + I +R NE + + P   ++ VIF +DF++  ++++A+ FL EFV+AQR    +PP  F+ +PPLEL ++         GFLSF +  +H+   +++  +TLLTGFR+YL+YH+K +KTY+HMRMRK+V G LQVLNRA PE E + KKT  G+ F R
Sbjct:    2 ATKGLVFLDSKNAILLETLQSRLLEGNRDECEFEFSDFDDVSYRVLCQGDNIK---VNISMRGLNELRSSGTDLVIDRLFPGLEVNPDPKYDFAIQFNISSISNP----QKLLTDISELKRNLLSGPIEVAFDALLSKTSNHLPITIINYRPNETIFVCPAPAKIVVIFLVDFNDITDKSLARIFLQEFVEAQRSIRTAPPVNFSREPPLELANLRFTYNPDATGFLSFGLEERHITGDKKQTAITLLTGFRSYLYYHIKCSKTYLHMRMRKKVAGWLQVLNRARPEIETE-KKTMGGKTFVR 296          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H1_9PHAE1.960e-19586.97Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
D7FR30_ECTSI5.770e-11491.71Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
A0A835ZH76_9STRA7.640e-7869.06Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema mi... [more]
T0RSJ4_SAPDV1.430e-7143.46Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia ... [more]
A0A067CQD1_SAPPC8.090e-7143.46Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniac... [more]
A0A024U441_9STRA1.460e-6841.42Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces ... [more]
A0A5D6XHZ0_9STRA2.070e-6841.23Arp2/3 complex 34 kDa subunit n=1 Tax=Pythium bras... [more]
A0A8K1FEV5_PYTOL4.540e-6740.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J2S8U6_9STRA8.140e-6742.86Arp2/3 complex 34 kDa subunit n=1 Tax=Pelagomonas ... [more]
A0A7S0XD73_9STRA1.760e-6538.94Arp2/3 complex 34 kDa subunit n=1 Tax=Chromulina n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007188Actin-related protein 2/3 complex subunit 2PFAMPF04045P34-Arccoord: 62..291
e-value: 1.3E-66
score: 224.7
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 11..306
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 136..307
e-value: 3.1E-59
score: 201.5
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 10..135
e-value: 1.2E-24
score: 89.2
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 128..290
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 11..125
NoneNo IPR availablePANTHERPTHR12058:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2coord: 11..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1468828..1474243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16570.1mRNA_C-linearis_contig9.16570.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1467155..1474291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16570.1 ID=prot_C-linearis_contig9.16570.1|Name=mRNA_C-linearis_contig9.16570.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=308bp
MAQRGAVQGQIFLDCFNPILENAIKPRLMDGKREPCELKVSDFDDAMYTL
EVPPNSLSTLSLSIAINGWKEISSNGGADMLATKYKGMVAPQPRPGHSVT
LTADLDNPAVPPEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPSA
IPWRKNEVVCIVPQADRVAVIFAIDFSESDERAIAKSFLMEFVDAQRVAN
NSPPCTFTPDPPLELRSMPMPPGQRPVGFLSFVIFAQHVERGRQEKTVTL
LTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAQ
GRAFNRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007188ARPC2
IPR034666ARPC2/4