prot_C-linearis_contig9.16551.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig9.16551.1
Unique Name	prot_C-linearis_contig9.16551.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	346

Homology

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 2.100e-144
Identity = 233/342 (68.13%), Postives = 261/342 (76.32%), Query Frame = 0

Query:    7 TLAFLLLIAPSTVVAAAASGHVRAAPTLVSTNGGAGTS--IACSRRSFALARHQAKACNSGCPTTQKPNAGNYERSPSSISISSKVDALQTLALGVRGGGXXSSEEASVMTLFIRVILPGFRREKNKDGELDLEGGGLLRRLKRLASGVLRTVRGSPAS-AETKGGAEKTNAKKKXXXXXXXAATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQEWIYHDDLC 345
            TLAFL L+A S+  AAA++             GGA +   +A  RRS AL    A++CN G PTTQ   +G+ E            DAL+T AL VRGG   S E+ S+ TLF+RV++PGFRR+K  DGELDLEGGGL+RRLKRL SGV R VRGSP    E KG A+    KKK       A T SHLE+ YRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITI+GAEGTIYAGEKFRLRV+FP++YPTKPPAVYF+QSPPPPKHQHIYTNGDICLSLLS+RDWKPNLTVMSLALSILSMLSSAKEKR PEDNA HAEA+PGQAQ+WIYHDDLC
Sbjct:    4 TLAFLCLVAHSSTSAAASTCQ-----------GGAPSRAFLAHGRRSSALTSSNARSCNPG-PTTQG-ESGHGE------------DALETFALVVRGG---SDEDPSLTTLFMRVLMPGFRRDKGGDGELDLEGGGLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQQWIYHDDLC 317

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA)

HSP 1 Score: 247 bits (630), Expect = 6.710e-76
Identity = 133/253 (52.57%), Postives = 172/253 (67.98%), Query Frame = 0

Query:   98 LGVRGGGXXSSEEASVMTLFIRVILPGFRREK---NKDGELDLEGG--GLLRRLKRLASGVLRTVRGSPASAETKGGAEKTNAKKKXXXXXXXAATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQE-WIYHDDL 344
            L +RGGG  S    S   LF+++ +PG+  +    + DG+  L     GL +R+KR  S +    +  P     KGG  K  + K             HL   +RPG+ANYRIQKEL+EFM NPP+ C+VSVGK+++VWIITI GA+GTI+ GEKF+LRV FP++YP KPP+VYF+Q PPPP+H+H+YTNGDICLSLL  +DW PNLT  +LALSILSMLSSAKEKR P DN  +A  +PGQ+Q+ WIYHD+ 
Sbjct:  127 LMLRGGGKGS---LSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKG-AKGGKGKGGSSKDD-------TVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLG-KDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNF 367

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC)

HSP 1 Score: 217 bits (552), Expect = 2.370e-66
Identity = 100/160 (62.50%), Postives = 125/160 (78.12%), Query Frame = 0

Query:  187 ATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPG-QAQEWIYHDDLC 345
            A   HL  ++RPG+ NYRIQKELK+F+  PPD C+++VG NIRVWIIT+ G EGT+Y GEK+RL++ FP +YP KPP +YF+Q  P P+H H+Y+NGDICL+LL   DWKP LTV S+ALSILSMLSSAKEK+ P DNA+HA+ K G Q   W+YHDD C
Sbjct:   50 AAKDHLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQ--PTPRHPHVYSNGDICLNLLGT-DWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE)

HSP 1 Score: 212 bits (540), Expect = 1.330e-64
Identity = 101/160 (63.12%), Postives = 125/160 (78.12%), Query Frame = 0

Query:  187 ATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPG-QAQEWIYHDDLC 345
            AT++HL+  + PGN NYRIQKELKEF+ +PP  C+VSVG N+R WIITI G EGT+Y  E ++L+V FP +YP  PP+VYF++  P P+H H+YTNGDICL+LL   DWKP LTV ++AL+ILSMLSSAKEK+ P DNAAHAEA PG Q   W+YHDD C
Sbjct:   46 ATSNHLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLR--PAPRHPHVYTNGDICLNLLGT-DWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHDDKC 202

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.010e-63
Identity = 96/156 (61.54%), Postives = 129/156 (82.69%), Query Frame = 0

Query:  191 HLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQ-EWIYHDDLC 345
            HL + +R GNAN+R+QKEL+E++ANP +  +V+VG NIRVW++T+ GA+GTI+AGEK++L+  FP DYP+KPP+VYF+Q  PPP+H+H+YTNGDICL+LL  RDW+PN+T   LALSILSMLSSA+EK+ P+DN  HA+  PG+ Q  W+YHDD C
Sbjct:  162 HLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQ--PPPRHEHVYTNGDICLNLLG-RDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA)

HSP 1 Score: 209 bits (532), Expect = 7.610e-63
Identity = 101/153 (66.01%), Postives = 123/153 (80.39%), Query Frame = 0

Query:  192 LEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQE-WIYHDD 343
            L +  + GN  YRIQKEL+EF+ NPP  CKVSVG NIRVW +T+ GAE T+Y GE+++LRV FP  YPTKPP+VYF++  PPPKH H+YTNGDICLSLL  +DW+PNLT  SLALSILSMLSSA+EKR P DNA HA++ PG+ Q+ W+YHDD
Sbjct:   91 LGKRVKRGNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLK--PPPKHPHVYTNGDICLSLLG-KDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHDD 240

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A7S2R2N4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2N4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.160e-59
Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = 0

Query:  186 AATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQE-WIYHDDLC 345
            +A A H+ +  +  N NYRIQ+ELKEF+ +PP   KV+VGKNIRVWIIT+ GA+ TIY G+KFRLRV FP DYPT PP+VYF+Q  P P+H+H+YTNGDICLSLL  +DW+P +T  S+A+SILS+LS A+ K  P DNA +   KPG  Q+ W+YHDD C
Sbjct:   52 SAAAVHIAKELKSNNPNYRIQRELKEFLKSPPPNLKVNVGKNIRVWIITLIGAKNTIYDGDKFRLRVQFPADYPTSPPSVYFLQ--PTPRHEHVYTNGDICLSLLG-KDWRPTMTAQSIAMSILSILSGAQRKSLPMDNARNCLNKPGAKQDDWVYHDDNC 209

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.500e-59
Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 0

Query:  191 HLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQE-WIYHDDLC 345
            HL    +  + NYRIQKEL+ F+ +PP    V+VGKNIRVWI+TI GA  TIY GEK+RLR++FP +YPT PP+VYF+  PP PKH+H+YTNGDICLSLL  +DW+P +T  SLA+SILS+LSSA+EK  P DNAAH++ KPG  Q+ WIYHDD C
Sbjct:  196 HLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLG-KDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHDDNC 348

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: A0A7S2L3M3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3M3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.020e-57
Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 0

Query:  191 HLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQE-WIYHDDLC 345
            HL+ +    N NYRIQ+ELK F+ +PP+   V VGKNIRVWIIT+ GA G+IY GEK+RL V FP++YP  PP+VYF+   P P+H+H+YTNGDICLSLL  +DW+P +T  S+ALSILS+LSSA  K  P+DNAAHA A+PG AQ+ W+YHDD C
Sbjct:  199 HLKSSLSQNNPNYRIQQELKAFIKSPPENLSVKVGKNIRVWIITLTGATGSIYEGEKYRLHVKFPKNYPAAPPSVYFLN--PTPRHEHVYTNGDICLSLLG-KDWRPTMTAQSIALSILSILSSASHKALPQDNAAHAGAQPGLAQDDWVYHDDNC 351

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BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Match: B7FUS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUS1_PHATC)

HSP 1 Score: 191 bits (486), Expect = 6.090e-57
Identity = 90/160 (56.25%), Postives = 121/160 (75.62%), Query Frame = 0

Query:  187 ATASHLEEAYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRLRVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLTVMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQ-EWIYHDDLC 345
            A  +HL+   +  + NYRIQ+ELK F+++PP    V VGKN+RVWI++I GA+GT+Y GE F+LR++FP  YPT PP+VYF+  P  P H+H+YTNGDICLSLL  +DW+P +T  S+A+SILS+LSSA+ K  P DNA HA+ KPG+ Q +W+YHDD C
Sbjct:   12 AADAHLQAKLKSTSPNYRIQRELKAFLSDPPSNLSVKVGKNLRVWIVSIEGAKGTVYEGEIFKLRISFPPQYPTVPPSVYFLP-PSIPVHEHVYTNGDICLSLLG-KDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHAQNKPGEYQKDWVYHDDNC 169

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot

BLAST of mRNA_C-linearis_contig9.16551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQY7_ECTSI	2.100e-144	68.13	Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus si...	[more]
A0A835ZFF1_9STRA	6.710e-76	52.57	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A0G4GQN8_VITBC	2.370e-66	62.50	UBC core domain-containing protein n=1 Tax=Vitrell...	[more]
A0A0G4GVI6_9ALVE	1.330e-64	63.13	UBC core domain-containing protein n=1 Tax=Chromer...	[more]
W7U274_9STRA	3.010e-63	61.54	Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidace...	[more]
A0A7S1TYR4_9STRA	7.610e-63	66.01	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S2R2N4_9STRA	2.160e-59	59.63	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S4RNY0_9STRA	8.500e-59	62.18	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2L3M3_9STRA	1.020e-57	60.90	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
B7FUS1_PHATC	6.090e-57	56.25	Predicted protein n=1 Tax=Phaeodactylum tricornutu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 203..344 e-value: 3.2E-27 score: 106.4
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 167..337
None	No IPR available	PANTHER	PTHR24068:SF148		coord: 167..337
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..345
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.79
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 204..330 e-value: 1.5E-29 score: 102.4
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 203..326 score: 25.158
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 200..345 e-value: 1.7E-42 score: 146.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 195..324

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig9	contig	C-linearis_contig9:1301778..1308804 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig9.16551.1	mRNA_C-linearis_contig9.16551.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig9 1301343..1311320 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig9.16551.1 ID=prot_C-linearis_contig9.16551.1|Name=mRNA_C-linearis_contig9.16551.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=346bp
MMGFGPTLAFLLLIAPSTVVAAAASGHVRAAPTLVSTNGGAGTSIACSRR
SFALARHQAKACNSGCPTTQKPNAGNYERSPSSISISSKVDALQTLALGV
RGGGGGSSEEASVMTLFIRVILPGFRREKNKDGELDLEGGGLLRRLKRLA
SGVLRTVRGSPASAETKGGAEKTNAKKKGKGKGKGAATASHLEEAYRPGN
ANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITINGAEGTIYAGEKFRL
RVAFPQDYPTKPPAVYFMQSPPPPKHQHIYTNGDICLSLLSARDWKPNLT
VMSLALSILSMLSSAKEKRNPEDNAAHAEAKPGQAQEWIYHDDLC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD