prot_C-linearis_contig9.16537.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16537.1
Unique Nameprot_C-linearis_contig9.16537.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length266
Homology
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A6H5JP15_9PHAE (Proteasome subunit alpha type n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP15_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 7.320e-79
Identity = 132/259 (50.97%), Postives = 183/259 (70.66%), Query Frame = 0
Query:    6 VPQGSLLFSAAAVI--STANPPRWQPQTIGGIFVRGG---ANAREDGPYSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGV-DLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSREDIETAFIE 258
            V    LL +  A+   S +     +P+T G + +R       AR+DG YSFSLTT+SP G L Q+EYA+NSA  GALS A  Y GG+ +A++ +T+SPLV +  TRKIA + DG  +++SGLAAD+R+LT+KA    L Y+GK+GE+A++PV  LV++VA ++QEYTQ+GGVRPFGV  LVAG+ D     LY+++PSGS ++WK  A+GKGS  AE +LHE FE+ +DRD ALEL +S+  + S GT+ ED+ETA+IE
Sbjct:    4 VANAMLLIACTAMTAGSISRTTHARPETAGCMGMRASQIRGGARDDGRYSFSLTTYSPEGRLNQLEYAMNSALGGALSIAVIYAGGIAMATVNQTKSPLVLDLLTRKIARLSDGIAIMHSGLAADARILTKKAEACCLGYKGKFGEQAIIPVGNLVTEVASILQEYTQMGGVRPFGVAFLVAGIGDDGNGLLYRLDPSGSVTSWKAAAIGKGSAEAEVILHEEFEDLVDRDHALELALSIALRCSSGTTEEDVETAYIE 262          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: D7FQX5_ECTSI (Proteasome subunit alpha type 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX5_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 3.120e-56
Identity = 91/171 (53.22%), Postives = 131/171 (76.61%), Query Frame = 0
Query:   89 VASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQL-YKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSREDIETAFIE 258
            +A++ +T+SPLV +  TRKIA + DG  +++SGLAAD+R+LT+KA    L Y+ K+GE+A++PV  LV++VA ++QEYTQ+GGVRPFG   LVAG+D  G  L Y+++PSGS ++WK  A+GKGS  AE +LH+ FE+ +DRD ALEL +S+  + S GT+ ED+ETA+IE
Sbjct:    1 MATVSQTKSPLVLDLLTRKIARLSDGIAIMHSGLAADARILTKKAEACCLGYKSKFGEQAIIPVGNLVTEVASILQEYTQMGGVRPFGAAFLVAGIDDDGHGLLYRLDPSGSVTSWKAAAIGKGSAEAEVILHDEFEDLVDRDHALELALSIALRCSSGTTEEDVETAYIE 171          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A7S2F165_9CHLO (Proteasome subunit alpha type n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F165_9CHLO)

HSP 1 Score: 173 bits (439), Expect = 4.940e-50
Identity = 102/212 (48.11%), Postives = 136/212 (64.15%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLG--PQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGT-SREDIETAFI 257
            YSFSLTTFSP G L QIEYA+N+   GA S       GVV+A+  KT SPLV E+  +KI ++ D    +YSG+  D RVL R+A  TA  Y   Y E   +PV  LV +VA VMQE+TQ GGVRPFGV LLVAG D LG  PQLY+V+PSG++ AWK  A+GK  + A+A L + ++ S++ D A+   +  L++   G  ++E +E A +
Sbjct:    6 YSFSLTTFSPSGKLVQIEYALNAVSQGATSLGIKAKNGVVLATEKKTPSPLVDESTVQKIVNITDNIGFVYSGMGGDYRVLVRRARRTAQAYYDVYKEA--IPVSQLVREVAAVMQEFTQSGGVRPFGVSLLVAGNDGLGHGPQLYQVDPSGTYFAWKASAIGKNMVNAKAFLEKRYDASVELDDAVHTALLTLKEGFDGELTKEKVEVAVV 215          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A059LMD8_9CHLO (Proteasome subunit alpha type n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LMD8_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 5.250e-49
Identity = 101/213 (47.42%), Postives = 133/213 (62.44%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGT-SREDIETAFIEEE 260
            YSFSLTTFSP G L QIEYA+N+A AGA S       GVV+A+  K  S LV ++  +KIA +     + YSG+  DSRVL RKA      Y  +Y E+  +PV  LV +VA VMQE+TQ GGVRPFGV LL+AG D  GPQLY+V+PSGS+ AWK  A+GK    A+  L + F E M+ D A+   +  L++   G  + ++IE   + E+
Sbjct:    6 YSFSLTTFSPNGKLVQIEYALNAASAGATSLGIKAANGVVIATEKKLPSTLVDDSTVQKIALLTPNMGMAYSGMGPDSRVLVRKARKAGQAYWQQYHEQ--IPVAQLVREVAAVMQEFTQSGGVRPFGVSLLLAGFDENGPQLYQVDPSGSYFAWKASAIGKNMTNAKTFLEKRFMEDMELDDAIHTALLTLKEGFEGELTGDNIEVGIVGED 216          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A7S2ZX75_9RHOD (Proteasome subunit alpha type n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZX75_9RHOD)

HSP 1 Score: 169 bits (428), Expect = 2.090e-48
Identity = 94/198 (47.47%), Postives = 127/198 (64.14%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIG 246
            YSFSLTTFSP G LTQIEYA+N+  AGA S     + G+VVA+  +  S L+ ET  +K+A V +   ++YSG+  DSRVL RKA   A  Y   Y E   +PV  +V ++A VMQEYTQ GGVRPFGV LLVAG D  GP LY+V+PSGS+ AWK  A+GK  + A+  L + + + ++ + A+   +  L++   G
Sbjct:    6 YSFSLTTFSPSGKLTQIEYALNAVAAGATSLGIKASNGIVVATEKRMSSALMDETTLQKVALVTENVGMVYSGMGPDSRVLIRKARKNAQTYYQTYRES--IPVSQVVRQIASVMQEYTQSGGVRPFGVSLLVAGYDYEGPHLYQVDPSGSYFAWKASAIGKNMVNAKTFLEKRYSDDIELEDAIHTSILTLKEGFEG 201          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A388K5M7_CHABU (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K5M7_CHABU)

HSP 1 Score: 167 bits (424), Expect = 8.330e-48
Identity = 95/201 (47.26%), Postives = 126/201 (62.69%), Query Frame = 0
Query:   46 DGPYSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIG 246
            D  YSFSLTTFSP G L QIE+A+N+  AGA S     + GVV+A+  K  S LV E   RKI+ +     V+YSG+  DSRVL  K+   A +Y   Y E   +P+  LV ++A VMQE+TQ GGVRPFGV LLVAG D  GPQLY+V+PSGS+ AWK  A+GK +  A+  L + + E M+ + A+   +  L++   G
Sbjct:    3 DSQYSFSLTTFSPSGQLVQIEHALNAVAAGATSLGIKASNGVVIATEKKLPSILVDEQSVRKISVLSKNIGVVYSGMGPDSRVLVSKSRKQAQQYFRLYEEP--IPIAQLVREIAAVMQEFTQSGGVRPFGVSLLVAGYDSSGPQLYQVDPSGSYFAWKASAIGKNTANAKTFLEKRYTEDMELEDAVHTAILTLKEGFEG 201          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A1Y1V3E0_9FUNG (Proteasome subunit alpha type n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1V3E0_9FUNG)

HSP 1 Score: 167 bits (424), Expect = 1.150e-47
Identity = 92/203 (45.32%), Postives = 127/203 (62.56%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSRED 251
            YSFSLTTFSP G L QIEYA+N+ + G  S       GVV+A+  K+ S LV ET   KI+ + +   ++YSG+  D+RVL  KA   A +Y+  Y E    PV  LV  VA++MQEYTQ GGVRPFGV LL+AG D  GP LY+V+PSGS+  WK  A+GK  ++A+  L + + ES++ + A+   +  L++   G   E+
Sbjct:    5 YSFSLTTFSPSGKLVQIEYALNAVKQGVTSIGIKATNGVVIATEKKSPSTLVDETTVEKISLITNDIGIVYSGMGPDARVLVGKARKAAQKYKRIYNENP--PVNMLVKDVALIMQEYTQSGGVRPFGVSLLIAGYDSNGPSLYQVDPSGSYWPWKATAIGKNMISAKTFLEKRYTESLELEDAVHTAILTLKEGYEGQMTEN 205          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A7S2NN63_9EUKA (Proteasome subunit alpha type n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2NN63_9EUKA)

HSP 1 Score: 167 bits (423), Expect = 1.180e-47
Identity = 94/210 (44.76%), Postives = 131/210 (62.38%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSRE-DIETAFI 257
            YSFSLTTFSP G L QIEYA+N+  AGA S       G+V+A+  K +S L+ E+  +KI  + +   V+YSG+  DSRVL R+    A  Y   Y +   +PV  LV ++A +MQE+TQ GGVRPFGV LLVAG D LGP LY+V+PSGS+ AWK  A+GK  + A+  L + + E ++ + A+   +  L++   G   E +IE A +
Sbjct:    6 YSFSLTTFSPSGKLVQIEYALNAVAAGATSLGIKATNGIVIATEKKLQSSLIDESTVQKIQLLTNNIGVVYSGMGPDSRVLVRRGRKVAQTYFRTYADH--IPVSQLVREIATIMQEFTQSGGVRPFGVSLLVAGYDDLGPHLYQVDPSGSYWAWKASAIGKHMVNAKTFLEKRYNEGIELEDAIHTAILTLKEGFEGEMNEHNIEVAVV 213          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: A0A507D9Z9_9FUNG (Proteasome subunit alpha type n=2 Tax=Synchytrium TaxID=286114 RepID=A0A507D9Z9_9FUNG)

HSP 1 Score: 167 bits (423), Expect = 1.620e-47
Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 0
Query:   49 YSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSRE 250
            YSFSLTTFSP G L QIEYA+N+   G  S     + G ++ +  KT SPL+ +T   KI+H+     ++YSG+  D+RVL  KA  +A EY+  Y E     VV LV +VA VMQE+TQ GGVRPFGV LL+ G D  GP LY+V+PSGS+ AWK  A+GK  + A+  L + F + M+ + A+   +  L++   G   E
Sbjct:    5 YSFSLTTFSPSGKLVQIEYALNAVSEGVTSIGIKGHNGAIICTEKKTTSPLIDDTTIEKISHICSSIGMVYSGMGPDARVLVDKARKSAQEYKRVYNEEP--SVVMLVREVASVMQEFTQSGGVRPFGVSLLIIGYDESGPSLYQVDPSGSYWAWKASAIGKNMINAKTFLEKRFSDGMELEDAVHTAILTLKEGFEGQMTE 204          
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Match: L1J0C3_GUITC (Proteasome subunit alpha type n=3 Tax=Cryptophyceae TaxID=3027 RepID=L1J0C3_GUITC)

HSP 1 Score: 167 bits (422), Expect = 1.660e-47
Identity = 95/216 (43.98%), Postives = 132/216 (61.11%), Query Frame = 0
Query:   46 DGPYSFSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLVRETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVVPVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSFSAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGT-SREDIETAFIEEE 260
            D  YSFSLTTFSP G L QIEYA+N+  AG+ S       GVVVA+  K  SPLV E+  +KIA + +   ++YSG+  DSRVL  KA   A +Y   YGE   +P   LV ++A VMQE+TQ GGVRPFGV LL+ G D  GP LY+V+PSGS+  WK  A+GK  + A+  L + + + ++ + A+   +  L++   G  S  +IE   + ++
Sbjct:    3 DSDYSFSLTTFSPSGKLVQIEYALNAVAAGSTSLGIKATNGVVVATEKKVSSPLVDESMVKKIAEIDNHIGMVYSGMGPDSRVLVAKARKIAQKYMLTYGEP--IPTNQLVREIASVMQEFTQSGGVRPFGVSLLIIGSDDKGPMLYQVDPSGSYWPWKACAIGKNMVNAKTFLEKRYNDDIELEDAIHTAILTLKEGFEGQISENNIEIGIVNDQ 216          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP15_9PHAE7.320e-7950.97Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
D7FQX5_ECTSI3.120e-5653.22Proteasome subunit alpha type 2 n=1 Tax=Ectocarpus... [more]
A0A7S2F165_9CHLO4.940e-5048.11Proteasome subunit alpha type n=2 Tax=Pycnococcus ... [more]
A0A059LMD8_9CHLO5.250e-4947.42Proteasome subunit alpha type n=1 Tax=Helicosporid... [more]
A0A7S2ZX75_9RHOD2.090e-4847.47Proteasome subunit alpha type n=3 Tax=Rhodosorus m... [more]
A0A388K5M7_CHABU8.330e-4847.26PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A1Y1V3E0_9FUNG1.150e-4745.32Proteasome subunit alpha type n=3 Tax=Neocallimast... [more]
A0A7S2NN63_9EUKA1.180e-4744.76Proteasome subunit alpha type n=1 Tax=Cyanoptyche ... [more]
A0A507D9Z9_9FUNG1.620e-4745.05Proteasome subunit alpha type n=2 Tax=Synchytrium ... [more]
L1J0C3_GUITC1.660e-4743.98Proteasome subunit alpha type n=3 Tax=Cryptophycea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 49..71
e-value: 4.4E-5
score: 32.9
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 49..69
e-value: 1.6E-7
score: 30.9
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 49..71
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 80..245
e-value: 1.5E-39
score: 135.5
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 45..264
e-value: 2.1E-59
score: 202.8
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 48..244
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 46..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
IPR034644Proteasome subunit alpha2PANTHERPTHR11599:SF16PROTEASOME SUBUNIT ALPHA TYPE-2coord: 46..244
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 64..265
score: 36.138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1194526..1197425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16537.1mRNA_C-linearis_contig9.16537.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1194418..1197470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16537.1 ID=prot_C-linearis_contig9.16537.1|Name=mRNA_C-linearis_contig9.16537.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=266bp
MRLASVPQGSLLFSAAAVISTANPPRWQPQTIGGIFVRGGANAREDGPYS
FSLTTFSPRGSLTQIEYAINSAQAGALSAAACYNGGVVVASICKTESPLV
RETGTRKIAHVRDGCCVLYSGLAADSRVLTRKAMDTALEYRGKYGERAVV
PVVTLVSKVAMVMQEYTQLGGVRPFGVVLLVAGVDLLGPQLYKVEPSGSF
SAWKCLAVGKGSLAAEAMLHEGFEESMDRDRALELVVSVLQKSSIGTSRE
DIETAFIEEEPYSRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR034644Proteasome_subunit_alpha2
IPR023332Proteasome_alpha-type