prot_C-linearis_contig9.16530.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16530.1
Unique Nameprot_C-linearis_contig9.16530.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length450
Homology
BLAST of mRNA_C-linearis_contig9.16530.1 vs. uniprot
Match: D7FR57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR57_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 7.270e-141
Identity = 264/450 (58.67%), Postives = 311/450 (69.11%), Query Frame = 0
Query:    1 MFGGLEDGVAESIPALIDEDLDLESLFAGGEDLFEFLDEREPAPLVIPPAPVVAAXXXXXXXX-TVERREPSGYTAPVFFPFGKPEPTAPQLKLSGVSSFKKINSRLLQGGALTDKEEADAIRELERALGVLGHQRRFLIEHKAGLEKWTSAVYGFDLSTEGFAATTLSTTAMGDRETRDGRGVAGAGGASLREVRVTVKCKGAKRRIDKQPLLAHVDRMWSPRQGRLKNVKKRSSVKA-AEKPAKRGKLAVAKVDQAVVAGTRSMAGTKEIVEDRGMDEQSDGGPD-APGQGWNGLEGCSSLPLVSKRQSLPEDFNLEAEDRLGGNALTPSRPAGPAAKAAAEPGLRCDRLEDDADVLRQRLVQALVVPTVSKGGHRSGEQPALPHPEMAWKKSSTDELHLLDVAQLSLAQRVVVQLNGVGVFAVDGKAAQTSGRHAPGGQRLVRSSSS 447
            +FGGL+DGV ESIP LIDEDL  E LFAGGEDLFE LDER P  LVI        XXXX      +E REP GYTAPVFFPFGKPEPTA QLKLSGVSSFKKINSRLLQGGAL+D+EEADAIRELERALGVLGHQ+RFL EHKAGLEKW SAVYG +LS+  FAA      A GD E +D RG  GAG A LREVRV+VKCKGAKRR +KQ L+AHV++ W+P     KNVKKRSS +   +KP KR K    K D AVV GT S+    E V D  +D+++DG  D A GQ W  LE    +   S +Q   +D   EAEDRLG NA+   R + PAAKA  + G+R DR EDDA+VLRQRLV+ALVVP+V +  H S  +          K +S   L LLDV QL+ AQRV+VQL+GVG+  + G+A  TSG H  G ++L+R+++S
Sbjct:  119 LFGGLDDGVVESIPTLIDEDL--EDLFAGGEDLFELLDERVPPALVIXXXXXXXXXXXXAPSTPAIESREPPGYTAPVFFPFGKPEPTASQLKLSGVSSFKKINSRLLQGGALSDREEADAIRELERALGVLGHQKRFLREHKAGLEKWASAVYGLNLSSGAFAAVGAIPAAAGDEERQDSRGPMGAGRARLREVRVSVKCKGAKRRAEKQ-LVAHVNQKWAPSHDHSKNVKKRSSGRPEVDKPTKRSKPPAPKADLAVVVGTSSITSVSEGVIDEPVDKKNDGISDVADGQVW--LEDSDYVSPTSGKQPPSQDTTHEAEDRLGRNAVISLRSSEPAAKATFDTGVRGDRGEDDAEVLRQRLVRALVVPSVEESVHTSDARSKPDVTAARRKPASAGALDLLDVTQLNFAQRVLVQLHGVGLIKILGQA--TSGNHVSGSRKLIRANAS 561          
BLAST of mRNA_C-linearis_contig9.16530.1 vs. uniprot
Match: A0A6H5JHX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX8_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 5.060e-93
Identity = 186/351 (52.99%), Postives = 231/351 (65.81%), Query Frame = 0
Query:   99 FKKINSRLLQGGALTDKEEADAIRELERALGVLGHQRRFLIEHKAGLEKWTSAVYGFDLSTEGFAATTLSTTAMGDRETRDGRGVAGAGGASLREVRVTVKCKGAKRRIDKQPLLAHVDRMWSPRQGRLKNVKKRSSVKA-AEKPAKRGKLAVAKVDQAVVAGTRSMAGTKEIVEDRGMDEQSDG-GPDAPGQGWNGLEGCSSLPLVSKRQSLPEDFNLEAEDRLGGNALTPSRPAGPAAKAAAEPGLRCDRLEDDADVLRQRLVQALVVPTVSKGGHRSGEQPALPHPEMAWKKSSTDELHLLDVAQLSLAQRVVVQLNGVGVFAVDGKAAQTSGRHAPGGQRLVRSSSS 447
            +   +SRLLQGGAL+D+EEADAIRELERALGVLGHQ+RFL EHKAGLEKW SAVYG +LS+  FAA      A GD E  D RG  GAG A LREVRV+VKCKGAKRR +KQ L+AHV++ W+P     KNVKKRSS +   +KP KR K    K D AVV GT S+    E V D  +D+++DG    A  Q W  LE   +    S +Q   +D   EAED LG N +T  R + PAAKA  + G+R DR+EDDA+VLRQRLV+ALVVP+V +  H S  +          K +S   L LLDV QL+LAQRV+VQL+GVG+    G+A  TSG H  G ++L+ +++S
Sbjct:    4 YFSTHSRLLQGGALSDREEADAIRELERALGVLGHQKRFLREHKAGLEKWASAVYGLNLSSGAFAAVGAIPAAAGDEEREDSRGPMGAGRARLREVRVSVKCKGAKRRAEKQ-LVAHVNQKWAPSYDHSKNVKKRSSGRPEVDKPTKRSKPPAPKADLAVVVGTSSITSVSEGVIDEQVDKKNDGISAVADRQVW--LEDLDNFSPTSGKQPPSQDTTHEAEDCLGRNPVTSLRSSEPAAKATFDTGVRGDRVEDDAEVLRQRLVRALVVPSVEESVHTSDVRRKPDVTAARRKPASAGALDLLDVTQLNLAQRVLVQLHGVGLIKNLGQA--TSGNHVSGSRKLIHANAS 349          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR57_ECTSI7.270e-14158.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHX8_9PHAE5.060e-9352.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1128828..1131411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16530.1mRNA_C-linearis_contig9.16530.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1127708..1132178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16530.1 ID=prot_C-linearis_contig9.16530.1|Name=mRNA_C-linearis_contig9.16530.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=450bp
MFGGLEDGVAESIPALIDEDLDLESLFAGGEDLFEFLDEREPAPLVIPPA
PVVAAAPVVAPTPTVERREPSGYTAPVFFPFGKPEPTAPQLKLSGVSSFK
KINSRLLQGGALTDKEEADAIRELERALGVLGHQRRFLIEHKAGLEKWTS
AVYGFDLSTEGFAATTLSTTAMGDRETRDGRGVAGAGGASLREVRVTVKC
KGAKRRIDKQPLLAHVDRMWSPRQGRLKNVKKRSSVKAAEKPAKRGKLAV
AKVDQAVVAGTRSMAGTKEIVEDRGMDEQSDGGPDAPGQGWNGLEGCSSL
PLVSKRQSLPEDFNLEAEDRLGGNALTPSRPAGPAAKAAAEPGLRCDRLE
DDADVLRQRLVQALVVPTVSKGGHRSGEQPALPHPEMAWKKSSTDELHLL
DVAQLSLAQRVVVQLNGVGVFAVDGKAAQTSGRHAPGGQRLVRSSSSAF*
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