prot_C-linearis_contig9.16517.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16517.1
Unique Nameprot_C-linearis_contig9.16517.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length633
Homology
BLAST of mRNA_C-linearis_contig9.16517.1 vs. uniprot
Match: D7FR44_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR44_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 4.870e-84
Identity = 322/576 (55.90%), Postives = 365/576 (63.37%), Query Frame = 0
Query:    1 MDFIVDEPLEDLVRSVVPTAVEVDRLSLKDAIKVASAAKAQDKGSEAPKVPTVDRDDSLAELETSFTKQFLSGEIAADIIEEEPKAPSQGLGXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEGSTSVPPPNIMAVSVDVPKRRQSMAGGYPAAPSSPRNTPRGQVKRGGSPSAM--AGPEP-VVVDDLPKRRSSVTRPGGGSLAGLQAESVPG--SGIYDDDVFTMPATPEMKKQNSEIQLLESVGSLSVEPVEASSVPKKRRSFTVSQSWLEAAAQESAKALEAKILGEAQQAXXXXXXXXXXXXXXX---VAACLFRLKDKVEHNAEIERAKXXAEKRKRAAALEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQRGAEARQAAEMKAAEATERAEEAARA---------------------------------------RQEEDGIKEEARRALQAEAELLRSKLQEACEXXXXXXXXXXXXXXHKEAQELRQAXXXXXXXXKLVEXXXXXXXXXXXXXXXXXXXXKSWEKKFQALQREREEETQRAKEELGRAVEEAKEF 529
            MDFI++   +DL+RSVVP A++VDRLSL DAIKVA+AAK Q++GS  P+ P + R+ SLAELE+SF K+ + GEI AD IEEEP+ PS G  XXXXXXXXXXXXXXXXXXXXXXXX  E P G  S PPP + AV + VP RR+S+AG +P  PSSP  T      RG S S+    G EP VVVD  PKRR SV   G GSL G++A+SVPG   G  DDD  T+PA+PEM    SE++LL+S GSL VEPV  S+VP+ RRS TVSQSW EAAAQES KALEA+ L EA   XXXXXXXXXXXXXX    VA CL  L DKV+H A+I  A+  AE+R R AALEVE      X            XXXXXXXXXX        L    AE R AAE +AAEA ERAEEA R                                               KE ARRALQAEAE LRSKLQEA E   XXXXXXXXXXX       R   XXXXXXX    XXXXXXXXXXXXXXX       WE+KFQALQRERE+E QRA+ E+ RAVEEA+EF
Sbjct:  176 MDFILEGSPKDLIRSVVPAAMDVDRLSLNDAIKVATAAKTQEQGSAPPQRPGIGREGSLAELESSFNKRIMLGEITADAIEEEPRVPSVGXXXXXXXXXXXXXXXXXXXXXXXXXXIVEGPAGIESAPPPAVAAVGLAVPVRRRSIAGNHPV-PSSPSTTAPWPTSRGSSFSSAHGQGQEPEVVVDKFPKRRMSVASSGSGSLKGIRADSVPGPGGGRGDDDDSTLPASPEMLTMTSEMELLDSAGSLGVEPVITSAVPR-RRSITVSQSWKEAAAQESVKALEAERLVEAXXXXXXXXXXXXXXXXXAEKVVAECLSSLADKVQHRADIAEAREEAEQRARDAALEVERAEAAAXRVEVETALRLAVXXXXXXXXXXSAREEADRLAAEAAEGRAAAETRAAEAAERAEEALRLVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGARRALQAEAEALRSKLQEAGEEAAXXXXXXXXXXXXXXXXXXRLMEXXXXXXXXXXXXXXXXXXXXXXXXXXARLEALVWEEKFQALQREREQEAQRARXEMERAVEEAREF 749          
BLAST of mRNA_C-linearis_contig9.16517.1 vs. uniprot
Match: A0A6H5L292_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L292_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.060e-44
Identity = 138/275 (50.18%), Postives = 164/275 (59.64%), Query Frame = 0
Query:    1 MDFIVDEPLEDLVRSVVPTAVEVDRLSLKDAIKVASAAKAQDKGSEAPKVPTVDRDDSLAELETSFTKQFLSGEIAADIIEEEPKAPSQGLGXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEGSTSVPPPNIMAVSVDVPKRRQSMAGGYPAAPSSPRNTPRGQVKRGGSPSAMAGPEP-VVVDDLPKRRSSVTRPGGGSLAGLQAESVPGSGIYDDDVF--TMPATPEMKKQNSEIQLLESVGSLSVEPVEASSVPKKRRSFTVSQSWLEAAAQ 272
            MDFI++   EDL+RSVVP A++VDRLSL DAIKVA+AAK Q++GS  P+ P + R+ SLAELE+SF KQ + GEI AD IEEEP+ PS G  XXXXXXXXXXXXX                        P I+                 P A  S  ++  GQ           G EP VVVD  PKRR S+   GGGSL GL+A+SVPG           T+PA+PEM K  SE++LL+S GSL VEPV  S+VPK RRS TVSQSW EAAAQ
Sbjct:    1 MDFILEGSPEDLIRSVVPAAMDVDRLSLNDAIKVATAAKTQEQGSAPPQRPGIGREGSLAELESSFNKQIMLGEITADAIEEEPRVPSVGXXXXXXXXXXXXXXXNQA---------------------PCII-----------------PTAGGSSFSSGHGQ-----------GQEPEVVVDKFPKRRMSMASSGGGSLKGLRADSVPGPWXXXXXXXXSTLPASPEMLKMTSEMELLDSAGSLGVEPVITSAVPK-RRSITVSQSWKEAAAQ 225          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR44_ECTSI4.870e-8455.90EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L292_9PHAE1.060e-4450.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 369..532
NoneNo IPR availableCOILSCoilCoilcoord: 312..358
NoneNo IPR availableCOILSCoilCoilcoord: 279..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1043292..1051347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16517.1mRNA_C-linearis_contig9.16517.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1032906..1052233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16517.1 ID=prot_C-linearis_contig9.16517.1|Name=mRNA_C-linearis_contig9.16517.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=633bp
MDFIVDEPLEDLVRSVVPTAVEVDRLSLKDAIKVASAAKAQDKGSEAPKV
PTVDRDDSLAELETSFTKQFLSGEIAADIIEEEPKAPSQGLGREDSLAQL
ESSFKKQVLSGNIPAAIMEAPEGSTSVPPPNIMAVSVDVPKRRQSMAGGY
PAAPSSPRNTPRGQVKRGGSPSAMAGPEPVVVDDLPKRRSSVTRPGGGSL
AGLQAESVPGSGIYDDDVFTMPATPEMKKQNSEIQLLESVGSLSVEPVEA
SSVPKKRRSFTVSQSWLEAAAQESAKALEAKILGEAQQAEAERQKAESEK
ARAEVAACLFRLKDKVEHNAEIERAKAEAEKRKRAAALEVERAEAAAARA
EVETALRLLVESLERDTAVAKAKEEADRLVQRGAEARQAAEMKAAEATER
AEEAARARQEEDGIKEEARRALQAEAELLRSKLQEACEEAAERAQEEAQA
RAHKEAQELRQAEEQAEREAKLVEEAKRAAEREAEVKEAADRDAKSWEKK
FQALQREREEETQRAKEELGRAVEEAKEFERAKELALRAAEERHPLEGAG
VSFDDVNSREGKSWWQCLSCSPDESSDANVDGKKAGSKSMYDNEDDAAVS
GLKPETWIKSAGATASTRSMDRPGKADVCSIS*
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