prot_C-linearis_contig9.16506.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16506.1
Unique Nameprot_C-linearis_contig9.16506.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length391
Homology
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: D7FQZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQZ5_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.500e-115
Identity = 247/370 (66.76%), Postives = 267/370 (72.16%), Query Frame = 0
Query:    1 MVLSYSCALLTLTLCATPPSLGSAKSATSHRAAAPLQ-QQHTQRLGRLGLNDEGE-GCALLPLPTTAEA-AXXXXXXXXXXXXXXXRGGLSRIGAARGGRCLAKLRKDAAALARREQGGQRAGGLEAALGLARGGAGGGYNYDDEYYGGLEGDGGDXPXXEDGAGGWGXXXXXXXXXXXRGRGRGRYDDPYGDTGNRGPPSKRAGVGRGARGAGGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGSSKRKKGRGSSRQKRSS--RAAPSRDDYD 365
            MVL+YSCALL LTLCATPPSLGSAK+A  +RAAA LQ QQH +R GRLG ND  E G +LL  P  A   A         XXXXX RGGL R  AA  GRC AK     A        G R+ G EAA+GLARGG GGGYNYDD+YY       GDXPXX        XXXXXXXXXXX      RYD PY +   R   SK  G GRG  GAGGFDLTGTI  GNKKYGIYALAGS+LLTMMGVSLMFEKNLIRLGNLGF++GM+LFIGPSNVVRYFTQ+SKLRGS+IFAVGFFFVFTGHPIIGL+IEVFGFLNLFGNMLPM+WAMASNMPF+K+I+GSGSSK K              RAAPSRDDYD
Sbjct:    1 MVLTYSCALLALTLCATPPSLGSAKTAAGYRAAATLQRQQHQRRSGRLGANDGAEAGRSLLEHPQAAATPAAHIRRRDKNXXXXXRRGGLGRTRAAGNGRCAAKATGKEAXXXAAAADGIRSTGFEAAVGLARGG-GGGYNYDDDYYXXXXXXXGDXPXXXXXXXXXXXXXXXXXXXXXX---XDRYD-PYEE---RRGSSKSGGRGRGKSGAGGFDLTGTIANGNKKYGIYALAGSVLLTMMGVSLMFEKNLIRLGNLGFVAGMSLFIGPSNVVRYFTQASKLRGSVIFAVGFFFVFTGHPIIGLAIEVFGFLNLFGNMLPMVWAMASNMPFIKEIMGSGSSKGKXXXXXXXXXXXXXXRAAPSRDDYD 362          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A6H5KWX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX1_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 6.650e-97
Identity = 249/419 (59.43%), Postives = 270/419 (64.44%), Query Frame = 0
Query:    1 MVLSYSCALLTLTLCATPPSLGSAKSATSHRAAAPLQ-QQHTQRLGRLGLNDEGE-GCALLPLP-TTAEAAXXXXXXXXXXXXXXXRGGLSRIGAARGGRCLAKLRKDAAALARREQGGQRAGGLEAALGLARGGAGGGYNYDDEYYGGLEGDGGDXPXXEDGAGGWGXXXXXXXXXXXRGRGRGRYDDPYGD-----------------------------------------------TGNR--GPPSKRAGVGRGARGAGGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGSSKRKKGRGSSRQKRS--SRAAPSRDDYD 365
            MVL++SCALL LTLCATPPSLGSAK+A  +RAAA LQ QQH  R GRLG N+ GE G ++L  P   A +AXXXXXXXXXXXXXXX+GGL RI AA  GR  AK+    AA A  +  G R+ GLEAALGLARG                      XP  EDGA    XXXXXXXXXXX                                                              G R  G  SKR G GRG  GAGGFDLTGTIT GNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGF++GM+LFIGPSNVVRYFTQ+SKLRGS+IFAVGFFFVFTGHPIIGL+IEVFGFLNLFGNMLPM+WAMASNMPFVK+I+GSGSSK K             SRAAPSRDDYD
Sbjct:    1 MVLTFSCALLALTLCATPPSLGSAKTAVGYRAAATLQRQQHQHRSGRLGANNGGEAGWSILEHPQAAATSAXXXXXXXXXXXXXXXQGGLGRIRAAGNGRREAKVTGREAAAAAAD--GIRSAGLEAALGLARGXXXXXXXXXXXXXX-XXXXXXXXPYYEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGRRLGGSSKRGGRGRGKSGAGGFDLTGTITNGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFVAGMSLFIGPSNVVRYFTQASKLRGSVIFAVGFFFVFTGHPIIGLAIEVFGFLNLFGNMLPMVWAMASNMPFVKEIMGSGSSKGKXXXXXXXXXXXXXSRAAPSRDDYD 416          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A835Z8R7_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.660e-38
Identity = 76/125 (60.80%), Postives = 95/125 (76.00%), Query Frame = 0
Query:  211 GGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDII 335
            GG DL   +TKG+K +G   +A  +LLT MG+SL F K LIRLGNL  + G++L IGPS  V+YFT  +KLRG+IIFA+GFF VFTGHPI+G++ EVFGFLNLFGNMLP+L  MA  +P V D+I
Sbjct:  517 GGVDLGSVVTKGHKTWGGMCIAAGVLLTGMGISLFFNKFLIRLGNLALVLGVSLLIGPSRCVKYFTHPTKLRGTIIFALGFFLVFTGHPILGIAAEVFGFLNLFGNMLPLLTMMARQLPVVGDLI 641          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A7S1XYC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYC5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 8.270e-37
Identity = 74/169 (43.79%), Postives = 107/169 (63.31%), Query Frame = 0
Query:  188 YGDTGNRGPPSKRAGVGRGARG---AGGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGSSKRKKGRGSSRQKR 353
            YGD+   G   +R G G        + G      + KGNKKYG+  L G  ++TM+G++LMFE+NL+RLGNL  ++G+AL +GP  +VRY  Q SKLRG+ +F++GF  +  G P +G+ +E+FG +NLFGNM PM+WA+   MP VK++      K   GRG+ R +R
Sbjct:    5 YGDSMGMGTQQRRRGAGXXXXXXXXSQGLAAAAALKKGNKKYGVVCLGGGTVVTMLGMTLMFERNLMRLGNLLQVAGLALLMGPPRLVRYLLQKSKLRGTTVFSLGFLLMLNGRPFVGMILELFGIINLFGNMFPMVWAVVQRMPIVKELFRDSGGKAG-GRGARRPQR 172          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A6V1NTD6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NTD6_HETAK)

HSP 1 Score: 139 bits (350), Expect = 8.430e-35
Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0
Query:  215 LTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGSSKRKKGRGSSRQK 352
            L G      KKYG   +   +L T++G+SL FEKNL+RLGN+ F++G AL IGP   V +FT   +LR +  FAVG FFV  G P+IG+  E+FGFLNLFGNM P++W+M  NMPFV+D++G+     +  +G SRQK
Sbjct:  120 LGGLAGNKTKKYGFMFVGAGLLFTILGMSLFFEKNLLRLGNVLFLTGAALVIGPGRTVGWFTAKQRLRATGTFAVGVFFVLIGKPVIGMIFEIFGFLNLFGNMFPLVWSMTKNMPFVRDLVGNSP---RSSKGGSRQK 254          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A7R9U9B3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9B3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.060e-34
Identity = 60/116 (51.72%), Postives = 86/116 (74.14%), Query Frame = 0
Query:  219 ITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDI 334
            + KGNKKYGI  + G  ++TM+G++LMFEKNL+RLGNL  ++G+AL +GP+ +V Y  Q SKLRG+++FA GF F+  G   IG  +E+FG +NLFGNM P+LW +   MP V+++
Sbjct:   74 LRKGNKKYGIMCIGGGTVVTMLGITLMFEKNLMRLGNLLQVAGLALLLGPARLVSYMMQRSKLRGAMVFATGFTFIMNGRSFIGFFLELFGIINLFGNMFPVLWNLVQRMPIVREL 189          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A7S2XZL7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.590e-34
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 0
Query:  197 PSKRAGVGRGARGAGGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIG 336
            PSK+     G+  + G D T  +T+GNKK G   L    +LTM+G++L FEKNL+RLGNL F++G++  +GP  ++ YF    K RG + F +G   VF GHP++G+ +E FG LNLFGNM P++W+M   MPF++D++G
Sbjct:  106 PSKKDQNSYGSSTSSGTDATMFLTQGNKKVGFALLGSGSVLTMLGMTLFFEKNLLRLGNLLFLAGVSQVMGPKRMIGYFMAPDKRRGGVTFCLGVVLVFMGHPVLGMLLEFFGILNLFGNMFPIVWSMVKKMPFIRDLVG 245          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: F0YIZ2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIZ2_AURAN)

HSP 1 Score: 118 bits (296), Expect = 4.260e-29
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 0
Query:  224 KKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFV 331
            +K G+   A     TM+GVSL FEKNLIRLGN+  ++G  + +GP    RY    +KLRGS+ FA GF  + +GHP++G+ +E+FGFLNLFGN+ P+  AM  N+PFV
Sbjct:    1 RKTGLIMCAAGAASTMLGVSLFFEKNLIRLGNVLLVAGAPIVVGPQRASRYVLNPAKLRGSLCFACGFMLILSGHPLLGIVVEIFGFLNLFGNLFPLFTAMFKNLPFV 108          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A7S2G941_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G941_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.220e-29
Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 0
Query:  223 NKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGS 339
            N+K G+  +AG   +T++G++LMF K+LI+LGN+ F+SG+   +G + V ++ TQ SK+RGS   A GFF +  G PI G+ +E+FG LNLFGNM P+LW+M   +PFV  ++   S
Sbjct:   93 NRKLGMGLVAGGSAITLLGITLMFNKSLIKLGNIMFVSGIPCLLGIARVSKFLTQPSKMRGSATLAAGFFLILIGWPIFGMLVEIFGLLNLFGNMFPLLWSMLKRLPFVSALLSESS 209          
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Match: A0A7S4NBY5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBY5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.010e-27
Identity = 67/162 (41.36%), Postives = 95/162 (58.64%), Query Frame = 0
Query:  182 GRYDDPYGDTGNRGPPSKRAGVGRGARGAGGFDLTGT-----ITKGNKKYGIYALAGSILLTMMGVSLMFEKNLIRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPIIGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSG 338
            G YDD       R       G   G+   GG  L+G      +  GN+K G+  L+G   LT++GV+L F K+L+RLGNL F++G+ L +GP     YF Q SK R +   A G F VF G P++G+++EVFG LNLFGNM P+  A+A N+P +  ++G+G
Sbjct:  231 GYYDDRXXYPDERDDRGGERGRSXGSGNGGGSPLSGVKLPEMMKTGNRKVGLALLSGGAALTLLGVTLFFNKSLLRLGNLLFVAGVPLTLGPGRTAGYFLQPSKARATGCLAAGMFLVFVGWPVVGIALEVFGLLNLFGNMFPVAMALARNVPVLGSLLGNG 392          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ5_ECTSI1.500e-11566.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWX1_9PHAE6.650e-9759.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8R7_9STRA7.660e-3860.80Mitochondrial carrier domain-containing protein n=... [more]
A0A7S1XYC5_9STRA8.270e-3743.79Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6V1NTD6_HETAK8.430e-3550.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U9B3_9STRA1.060e-3451.72Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XZL7_9STRA1.590e-3445.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YIZ2_AURAN4.260e-2950.00Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2G941_9STRA5.220e-2946.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4NBY5_9STRA1.010e-2741.36Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 234..329
e-value: 3.3E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR21493:SF9GOLGI TRANSPORT PROTEIN 1-RELATEDcoord: 222..336
NoneNo IPR availablePANTHERPTHR21493CGI-141-RELATED/LIPASE CONTAINING PROTEINcoord: 222..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..314
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 273..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..390
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.633
NoneNo IPR availableTMHMMTMhelixcoord: 226..245
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 285..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:876986..883823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16506.1mRNA_C-linearis_contig9.16506.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 876951..884814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16506.1 ID=prot_C-linearis_contig9.16506.1|Name=mRNA_C-linearis_contig9.16506.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=391bp
MVLSYSCALLTLTLCATPPSLGSAKSATSHRAAAPLQQQHTQRLGRLGLN
DEGEGCALLPLPTTAEAAASDGRRRDNKWWWGGRGGLSRIGAARGGRCLA
KLRKDAAALARREQGGQRAGGLEAALGLARGGAGGGYNYDDEYYGGLEGD
GGDDPYYEDGAGGWGDDGWGGDDRGGRGRGRGRYDDPYGDTGNRGPPSKR
AGVGRGARGAGGFDLTGTITKGNKKYGIYALAGSILLTMMGVSLMFEKNL
IRLGNLGFISGMALFIGPSNVVRYFTQSSKLRGSIIFAVGFFFVFTGHPI
IGLSIEVFGFLNLFGNMLPMLWAMASNMPFVKDIIGSGSSKRKKGRGSSR
QKRSSRAAPSRDDYDQAGYGYDDDDWDNGGGGGGWGGYGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2