prot_C-linearis_contig89.16448.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16448.1
Unique Nameprot_C-linearis_contig89.16448.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length469
Homology
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BLAST of mRNA_C-linearis_contig89.16448.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 6.020e-175
Identity = 264/373 (70.78%), Postives = 310/373 (83.11%), Query Frame = 0 
Query:   96 DDQLLREVREALPELQGEEADGGSATGLEARREDPFPTSSERGALEAASASQQALLAGKRGLIIDVEVRQLDDGHAEFDQYMLIDFVTDVSKALATVSGRTKVLLRGLHLAERATEMLEKVNAEGEEVGIEPRRDISFCSFQMANSDEDDDEYSTRKFASTLGLGDEEERVFVMACPRRLADVTVLREVILAANGRPVVVLNPRVPYMPFEMEAFEIAYQLRQYNVQPAKANPKAAKKRMRGPRLTRLSQSQQNIFSELGQPIPRVLAARAFPDDFKLYVDVDGKGFQLESAYETKPQPAVLAFTAQKRVREFQDQVANEEKKANSQNRGFQSDDDDDFDWDTINDDLAEGEEPFIEPPMPSEEEINSRLRDD 468
            D QLLREVR+ALPEL+GE        G E +RE+PFPTSS+RGALEA+SASQQALLAGKRGLIIDVEVRQ+DD HAEFD+ M IDF TD+SKALATVSGR KVLLRG+HLAE+ATEML+K N +GEE GIEPRRDISFCSFQMAN+D++DDE S R FASTLGL +EEERVF+M CPRRL DVTVLRE+IL A GRPVV++ PR+PYMP E + FE  YQL+QYNVQP   NPK   KR++  RLTRL Q+QQ I+SELGQ IPRVL  RAFP DFKLY+D+DGKGFQLE  Y+ KPQPAV++FTAQ ++RE Q +V  +EK+  +++ G +  DDDDFDWDTINDDL EGEEPF+ PPMP+E+EIN+RLRDD
Sbjct:   45 DGQLLREVRQALPELEGE--------GPETKRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDEDDEKSMRDFASTLGLANEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPK---KRIKNVRLTRLGQNQQTIYSELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQQRVTLQEKRVVAKDHGVE--DDDDFDWDTINDDLEEGEEPFVVPPMPTEDEINARLRDD 404
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV95_ECTSI6.020e-17570.78DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 398..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..468
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.786
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 132..395
e-value: 4.0E-11
score: 43.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:720228..724794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16448.1mRNA_C-linearis_contig89.16448.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 719109..724905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16448.1 ID=prot_C-linearis_contig89.16448.1|Name=mRNA_C-linearis_contig89.16448.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=469bp
MHAVEKHLFASLCALLCSSTTTSAWVVLPGPAAPARASLQRQARHTAALG
ARVGDYFNSDGEEDEDAAAAREARESLERMWASSASESVQELDQGDDQLL
REVREALPELQGEEADGGSATGLEARREDPFPTSSERGALEAASASQQAL
LAGKRGLIIDVEVRQLDDGHAEFDQYMLIDFVTDVSKALATVSGRTKVLL
RGLHLAERATEMLEKVNAEGEEVGIEPRRDISFCSFQMANSDEDDDEYST
RKFASTLGLGDEEERVFVMACPRRLADVTVLREVILAANGRPVVVLNPRV
PYMPFEMEAFEIAYQLRQYNVQPAKANPKAAKKRMRGPRLTRLSQSQQNI
FSELGQPIPRVLAARAFPDDFKLYVDVDGKGFQLESAYETKPQPAVLAFT
AQKRVREFQDQVANEEKKANSQNRGFQSDDDDDFDWDTINDDLAEGEEPF
IEPPMPSEEEINSRLRDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995