prot_C-linearis_contig89.16441.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16441.1
Unique Nameprot_C-linearis_contig89.16441.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1370
Homology
BLAST of mRNA_C-linearis_contig89.16441.1 vs. uniprot
Match: A0A6H5LGE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGE7_9PHAE)

HSP 1 Score: 642 bits (1657), Expect = 2.170e-203
Identity = 451/947 (47.62%), Postives = 544/947 (57.44%), Query Frame = 0
Query:  431 DGSAQPPPLLRSFDDDWEAFRTRGEYSTEQSELETAPVETDLTSSVALPVSVNSAVLGRVGGCEVVLARRVGPGEVVKQLHLLPVSQRDDAPNSGGKPGTAPGEPHLSPNRPCRFVLLTTKAATTCFICARPSNSNSATPALSPFPAMGRPPSPGFSERRSPTPPSPSPLSAPSPAGQRTSQLGGQSRPIDSGGRLGSGLSGGSTGSAAGDHXXXXXXXXERLDVFLRRYCRFNHDLLLASITSTFLFALTVEGVEVWTFPSDDKLSEKLSEAGGRAGKWKWSEEREGSFGGLRAPLSLSSLSPHPSPRPCLLHVQELEINGVVPRTPGSCMVPLGGAAPGLLLFPSPPANQCASLAFLAQQCRRRLRSRAAADDPEELGDTPAFRKPPPPQNPFSL--GGSNTSAKPEQNGWQRKFAAWRDGFCGTGRGGATEAASASPLALILRLRTSTEAFRLLSAAAERSPRPLSARVSSVFVSAAEGLHGALTAEAAEAWRAAVFPDSGDAGAXXXXXXXDTAVRRAEIEPLLAGLASCWRLQRVAARCASLLGRLLLETAVTVGERWSDENSAAAGLAYTRACSWMLASGGPAVESFGLLRDAAGRVLAVGVKEMERTLSAEPSFVLVDDDEDDYPDEDHPYIATPGVPPPNLEKLLPRAMYESYLLPALGLGDTPETQSRCPPPPSVS--------ARDREASTLSLGDALSGLVAYLHRHDMRQLSQRQGLQDLGEGMRRPTLPLSAAVVYANRIPWAACPAALSEALVALDQQDKALAESTSGNISSSSGSSGTSLSGRKSPTGVAGVAKRSKPASKARRGSEHRRGSSASGPSPDNRAPTAESSSFLLPAQEWIAVARALLLGYSEQAEKSGATGAVSPGPA---GVLAADARILQLACERHPSLVVAHVAPARPGAGPLARDLLAGGRAQLVVAALVNLTSHARDG 1364
            D SAQPPPLLRSFDDDWEA RTR EY  E  E E AP+ T+   S + PVS NS VL R+G C+VVLARRVGPGEVVK+LHL P+ +     +S    G                                                                                                   G+S G     A           ++L VFLR+  RFN+D+L+ASITS FLF LTVEGVEVWT+PS     E L    G+  KW      +G FG +  PLS  +   HP PRPCLLHVQ+LE++GV+PR+P   MVPL GA PGLLLFP P A +  +LAFL  QC+RRLRS  AAD+P   G + AF KPP P  P S   GG+N      Q+ W RK AAWR+GFCG G   ATE  + SPLAL LRLR+ T A RLLS A E S RP  A+VS +F+SAAEGLH ALT E + AWRA V   +G A          +   +  IE +L GL +CWRLQRVAARCASLLG+LLLETA++  E+ S E   A GLAYTRACSW+LASG P VESF  L+D A RV   G  E E T +  PSFV +DDDE     E + Y+ T  VPP +LE+LLPRAMYE YLLP+ G+ DTP        PP ++        +   E  +LSL D LSGLV+YLHR D+++LS R GL  + +G  R T PLS AVVYA+R PW  CP ALS+AL+ALD+QDK L ESTS NI S+SGSSG SLS + S  G+  +  +++P  +    + H++ +S    S D+R PT +  + L P QEWIAVARA+L GY EQ    G TG     P      LAAD++ILQLACERHP+LV    AP R GAGPLARDLLA GR + VVAALV LTS    G
Sbjct:   74 DSSAQPPPLLRSFDDDWEAIRTRREYVPEPLEPEGAPLATE-PYSTSWPVSSNSTVLDRMGACDVVLARRVGPGEVVKELHLFPIHESSSTADSHAVDG---------------------------------------------------------------------------------------------------GISAGVVAEYA-----------QQLVVFLRQSYRFNNDMLVASITSAFLFVLTVEGVEVWTYPS-----ENLPVTDGQERKW----SEDGRFGDMGVPLSSPA---HPPPRPCLLHVQKLEVDGVLPRSPVQIMVPLAGATPGLLLFPPPLAAKGDTLAFLTHQCQRRLRSPGAADEPIANGIS-AFCKPPSPTTPLSAWPGGNNNLG---QDCWSRKLAAWRNGFCGLGGNKATEY-TPSPLALFLRLRSPTAAVRLLSVAEECSERPHPAKVSDMFLSAAEGLHNALTFEVSAAWRAGVGL-AGTASTLAGHGSSSSVAEQVRIETILPGLVNCWRLQRVAARCASLLGQLLLETALSAAEQGSAEGDCATGLAYTRACSWLLASGEPVVESFASLQDVAARVSVAG-DETELT-AVVPSFVSLDDDE-----EGNSYLTTAEVPPLDLEELLPRAMYELYLLPSFGVRDTPGVG-----PPRLALDSSAIPISESGEPQSLSLDDVLSGLVSYLHREDIQRLSLRPGLPSVWDGTPRYT-PLSTAVVYASRAPWTECPVALSQALLALDEQDKTLNESTSSNIRSNSGSSGASLSRKTSRGGLKRLKSKTRPRHERSGSTGHQKPAS----SLDDRDPT-DDETTLSPTQEWIAVARAILSGYLEQ---MGGTGGQPEAPRQGRSALAADSQILQLACERHPTLV----APLRGGAGPLARDLLAAGRVKPVVAALVTLTSCGDGG 866          
BLAST of mRNA_C-linearis_contig89.16441.1 vs. uniprot
Match: D7FV98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV98_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 8.710e-143
Identity = 329/657 (50.08%), Postives = 393/657 (59.82%), Query Frame = 0
Query:  289 GEVSPRCSSTPTTGSNAPATPSSRGDAESPKAASPQSHPPRSSPRDKSTTSSRGSAAALKSDSKDFPPKSASRGGSSXXXXXXXXXXXXXXXXXXRSP---GVRKDGGKSKPERRDGIAERAISEADDVIVCVLDPGGEEDGREADGSAQPPPLLRSFDDDWEAFRTRGEYSTEQSELETAPVETDLTSSVALPVSVNSAVLGRVGGCEVVLARRVGPGEVVKQLHLLPVSQRDDAPNSGGKPGTAPGEPHLSPNRPC-RFVLLTTKAATTCFICARPSNSNSATPALSPFPAMGRPPSPGFSERRSPTPPSPSPLSAPS------------PAGQRTSQLGGQSRPIDSGGRLGSGLSGGSTGSAAGDHXXXXXXXXERLDVFLRRYCRFNHDLLLASITSTFLFALTVEGVEVWTFPSDDKLSEKLSEAGGRAGKWKWSEEREGSFGGLRAPLSLSSLSPHPSPRPCLLHVQELEINGVVPRTPGSCMVPLGGAAPGLLLFPSPPANQCASLAFLAQQCRRRLRSRAAADDPEELGDTPAFRKPPPPQNPFSL--GGSNTSAKPEQNGWQRKFAAWRDGFCGTGRGGATEAASASPLALILRLRTSTEAFRLLSAAAERSPRPLSARVSSVFVSAAEGLHGALTAEAAEAWRAAV 927
            GE   R S+TP +G NAPA  + RGDA+SPKA SPQ+HPPRSSPRDKSTT  RG +   K + KDFPPK A+RGG S                  RSP   G RK+GGKSK E RDGI ERAISEA+D++VCVL PGGE+D RE + SA+PPPLLRSFDDDWEA RTR EY  E  E E+AP+ T+   S +LPVS NS VL R+G C+VVLARRVGPGEVVK+LHLLP+  R D  +S  +   +  +    P  PC RFVLLT+K AT C + A    + +A+ A S FPA+GR      S R SP+ P  S  +               P G R S     S  +D G          S G  A D         ++L VFLR+  RFN+D+L+ASITS FLF LTVEGVEVWT+PS++     +++  GR    KWSE+  G FG +  PLS  +   H SPRPCLLHVQ+LE++GV+PR+P  CMVPLGG  PGLLLFP P A                                    KPP P  P S   GG N      Q+ W RKFAAWRDGFCG G   ATE  + SPLAL LRLR+ TEA RLLS A ERS RP  A+ S++F+SAAEGLH ALT E + AWRAAV
Sbjct:    5 GEPRSRYSTTPESGFNAPAASTPRGDAQSPKAPSPQAHPPRSSPRDKSTTRLRGPSG--KPEPKDFPPKLAARGGPSGKSKGLAGVDEGG-----RSPVFSGFRKEGGKSKTEPRDGIVERAISEAEDLVVCVLHPGGEQDDRETESSARPPPLLRSFDDDWEAIRTRREYVPEPLEPESAPLATE-PFSTSLPVSGNSTVLDRMGACDVVLARRVGPGEVVKELHLLPIHDRVDPWSSEDEGDPSRDKARSHPVDPCCRFVLLTSKGATVCLVRA----ALTASEASSMFPALGR-----SSGRASPSRPRSSSFAXXXXXXXXXXDRKIPPVGSRCSSSTTDSHAVDGGI---------SAGGVAEDS--------QQLVVFLRQSYRFNNDMLVASITSAFLFVLTVEGVEVWTYPSENL---PVTDGQGR----KWSED--GRFGDMGVPLSSPA---HASPRPCLLHVQKLEVDGVLPRSPARCMVPLGGETPGLLLFPPPLAT-----------------------------------KPPSPTTPLSAWPGGDNNVG---QDFWPRKFAAWRDGFCGLGGSKATEY-TPSPLALFLRLRSPTEAVRLLSVAEERSERPHPAKASAMFLSAAEGLHNALTFEVSAAWRAAV 576          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LGE7_9PHAE2.170e-20347.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV98_ECTSI8.710e-14350.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:673802..681616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16441.1mRNA_C-linearis_contig89.16441.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 671494..681641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16441.1 ID=prot_C-linearis_contig89.16441.1|Name=mRNA_C-linearis_contig89.16441.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1370bp
MFDTADLIALPGLVPGAGDGVLRRDIARESVPGAEEAVEGGGVLNRNLHV
IEACAMGGHDVALAMSNGELCHANVSKGRTEAPDVVPTDGRWPHWTSWPT
RHGKVLSLQYDPAHDALVTIEQATTAAGDQAFLGRYHRRASLSGKESKRD
TRDGRSGETSDATTSRTRTRTPSWVGSSVPLATNHATVAVCASRGWVAVC
TGSVVNLWAVARQGLGQPTPRRRGTRLRQTQAPVGFEHALSVDLAELVGA
KDGMRKAGGAKHIALYGNLLAVATDHAVFLVHLSFDVKGEVSPRCSSTPT
TGSNAPATPSSRGDAESPKAASPQSHPPRSSPRDKSTTSSRGSAAALKSD
SKDFPPKSASRGGSSSSRGKSSGSAGVDEGSTGRSPGVRKDGGKSKPERR
DGIAERAISEADDVIVCVLDPGGEEDGREADGSAQPPPLLRSFDDDWEAF
RTRGEYSTEQSELETAPVETDLTSSVALPVSVNSAVLGRVGGCEVVLARR
VGPGEVVKQLHLLPVSQRDDAPNSGGKPGTAPGEPHLSPNRPCRFVLLTT
KAATTCFICARPSNSNSATPALSPFPAMGRPPSPGFSERRSPTPPSPSPL
SAPSPAGQRTSQLGGQSRPIDSGGRLGSGLSGGSTGSAAGDHDHDHDHDH
ERLDVFLRRYCRFNHDLLLASITSTFLFALTVEGVEVWTFPSDDKLSEKL
SEAGGRAGKWKWSEEREGSFGGLRAPLSLSSLSPHPSPRPCLLHVQELEI
NGVVPRTPGSCMVPLGGAAPGLLLFPSPPANQCASLAFLAQQCRRRLRSR
AAADDPEELGDTPAFRKPPPPQNPFSLGGSNTSAKPEQNGWQRKFAAWRD
GFCGTGRGGATEAASASPLALILRLRTSTEAFRLLSAAAERSPRPLSARV
SSVFVSAAEGLHGALTAEAAEAWRAAVFPDSGDAGAGGGGGGGDTAVRRA
EIEPLLAGLASCWRLQRVAARCASLLGRLLLETAVTVGERWSDENSAAAG
LAYTRACSWMLASGGPAVESFGLLRDAAGRVLAVGVKEMERTLSAEPSFV
LVDDDEDDYPDEDHPYIATPGVPPPNLEKLLPRAMYESYLLPALGLGDTP
ETQSRCPPPPSVSARDREASTLSLGDALSGLVAYLHRHDMRQLSQRQGLQ
DLGEGMRRPTLPLSAAVVYANRIPWAACPAALSEALVALDQQDKALAEST
SGNISSSSGSSGTSLSGRKSPTGVAGVAKRSKPASKARRGSEHRRGSSAS
GPSPDNRAPTAESSSFLLPAQEWIAVARALLLGYSEQAEKSGATGAVSPG
PAGVLAADARILQLACERHPSLVVAHVAPARPGAGPLARDLLAGGRAQLV
VAALVNLTSHARDGRPGKP*
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