prot_C-linearis_contig89.16439.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16439.1
Unique Nameprot_C-linearis_contig89.16439.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length114
Homology
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.470e-47
Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 0
Query:    5 FQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLFYSPHE 113
            FQTPRVN +VL Q++G  VCVVG+V+S+ EG SE+ LETSDG  +T++M  GSTWTSQYVEVIGHLHE   +QEFK+TD GD FDL  Y++AV LMTGK+SYLFY+P E
Sbjct:    4 FQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.180e-26
Identity = 45/104 (43.27%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    7 TPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLFYS 110
            TPR+N S+   +VG  VC+VG+V+   E +  +V+++SDG +V + MAPGS++ + +VE++G +  D +++EFK+ D G++FDL  Y + +QL  GKY  LFYS
Sbjct:   11 TPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLFYS 114          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 92.4 bits (228), Expect = 5.000e-22
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    2 GSTFQT-PRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            G+T  T PRVN   +  +VG  V +VG V SH   A   VL TSDG  V +   PGS ++S++VEVIG + ++ T+QEFKTT  GD+FDL TY++ VQ+   K+ +LF
Sbjct:    5 GATSGTAPRVNKKTMGSFVGRTVAIVGAVESHMPTAV--VLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 6.520e-22
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0
Query:    1 MGSTFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            M  +   PRVN +V+ QY+G  V +VG + S +   S +V++TSDG  VT+   PG+ +TS++VEVIG +  D ++QE+K T  GD FDL  Y+K V L+ GK++ +F
Sbjct:    1 MSESAPAPRVNKAVMAQYIGRTVALVGSLESWT--GSMAVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A1W0ABE2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.630e-21
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 MGSTFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            M  +   PRVN + +  Y+   V +VG + S +   S +V+++SDG  VT+  +PG+ ++S+YVEVIG +  D ++QEFK T  GD FD+A Y+K V L+ GK++ +F
Sbjct:    1 MAESAPAPRVNKATMVNYINRTVALVGSMESWT--GSNAVIKSSDGGLVTVHPSPGADYSSKYVEVIGQVQHDGSIQEFKCTSFGDDFDMANYDKLVMLIHGKFAPMF 106          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: M4C0N3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0N3_HYAAE)

HSP 1 Score: 89.7 bits (221), Expect = 6.070e-21
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    7 TPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            +PRVN   +  YVG+ V +VG + SHS  A   VL TSDG  V +   PGS + S+ VEVIG + + +T+QEFKTT  GD+FDL  Y++ V L   KY +LF
Sbjct:   13 SPRVNKKSMGAYVGHTVALVGAIESHSPTAV--VLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSQTIQEFKTTLFGDTFDLDVYDQFVGLAQTKYKHLF 112          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A1V9ZKF2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKF2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.910e-20
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 MGSTFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            M      PRVN +++  Y+   V +VG + S +   + +V++ SDG  VTI  +PG+ ++S++VEVIG +  D ++QEFK T  GD FDLA Y+K V LM GK++ +F
Sbjct:    1 MAEPAPAPRVNKALMAGYINRTVALVGSMESWT--GNSAVVKASDGGLVTIHPSPGADYSSKFVEVIGQVQPDGSLQEFKCTSYGDDFDLANYDKLVALMHGKFAPMF 106          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A067CY70_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY70_SAPPC)

HSP 1 Score: 85.5 bits (210), Expect = 2.380e-19
Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 MGSTFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            M      PRVN +++  YV   V +VG + S +   + ++++ SDG  VT+  APG+ ++S+++EVIG +  D ++QEFK T  GD+FDL  Y+K V LM GK++ +F
Sbjct:    1 MAEPAPAPRVNKALMASYVNRTVALVGSMESWT--GNSAIIKASDGGLVTVIPAPGADYSSKFIEVIGLVQPDGSLQEFKCTSFGDNFDLGNYDKLVTLMHGKFAPMF 106          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: F0W7W7_9STRA (Uncharacterized protein AlNc14C203G8745 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7W7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.540e-19
Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    3 STFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLMTGKYSYLF 108
            +T   PRVN  +L  ++G  V +VG V  H+  A   VL +SDG  V ++  PGS + S+YVEVIG + E+ T++EFK T  G+ FD+ TY + V+L   ++ +LF
Sbjct:    2 NTSTAPRVNQKLLRNFIGKTVALVGNVEHHNPTAV--VLRSSDGMTVNVQPKPGSDYGSKYVEVIGRVLENGTIEEFKVTLFGEKFDMETYNQMVELAHTEFRHLF 105          
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Match: A0A7S4ISK3_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ISK3_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 3.770e-18
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    5 FQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVTIKMAPGS--TWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAV 97
            F TPRVN + +  YVG NV VVG+V   S    ++VL++SD  +VT+K  P S  TWT QY+EVIG + ED +V+E  +T+ G++FDL  ++  V
Sbjct:    2 FTTPRVNLATIGSYVGRNVRVVGKV-QQSPSNGQAVLQSSDNGSVTVKTQPQSEQTWTDQYMEVIGKVLEDMSVEELFSTNFGNNFDLDNHDALV 95          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI1.470e-4766.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UTE4_9STRA2.180e-2643.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1C3J4_PYTOL5.000e-2247.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485KWY3_9STRA6.520e-2243.52Aste57867_12966 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0ABE2_9STRA3.630e-2140.74Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
M4C0N3_HYAAE6.070e-2148.04Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A1V9ZKF2_9STRA5.910e-2041.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067CY70_SAPPC2.380e-1939.81Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
F0W7W7_9STRA4.540e-1941.51Uncharacterized protein AlNc14C203G8745 n=1 Tax=Al... [more]
A0A7S4ISK3_9EUKA3.770e-1846.32Hypothetical protein n=2 Tax=Vannella sp. CB-2014 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 4..111
e-value: 2.4E-30
score: 106.7
NoneNo IPR availablePANTHERPTHR15114FAMILY NOT NAMEDcoord: 5..109
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 6..101
e-value: 1.8E-20
score: 73.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 6..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:654409..658220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16439.1mRNA_C-linearis_contig89.16439.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 654269..658984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16439.1 ID=prot_C-linearis_contig89.16439.1|Name=mRNA_C-linearis_contig89.16439.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=114bp
MGSTFQTPRVNASVLDQYVGYNVCVVGRVVSHSEGASESVLETSDGKNVT
IKMAPGSTWTSQYVEVIGHLHEDRTVQEFKTTDCGDSFDLATYEKAVQLM
TGKYSYLFYSPHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013970Rfa2
IPR012340NA-bd_OB-fold