prot_C-linearis_contig89.16396.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16396.1
Unique Nameprot_C-linearis_contig89.16396.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length164
Homology
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.600e-43
Identity = 119/157 (75.80%), Postives = 123/157 (78.34%), Query Frame = 0
Query:    1 MVYPVRGMTSLSAMSEGDEE-GGGDHDAREAADGSPAADEIRAVQDXXXXXXXKIEDAEEETAEVVKKIDVVEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRRKEKQLRXXXXXXXXXXXXXXXXXXXXXXXXXE-KDRLSRIEQLRANNAPA 155
            M YPVRGMT LSAMSEGDEE GGGDH AREAAD  PAADEIRAVQD       KIEDAEEETAEVVKKID +EAAIAGG+RYLGMTDPEALLKQL       EQLRR      XXXXXXXXXXXXXXXXXXXXX    + +DRLSR EQ RANNAPA
Sbjct:    1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL-------EQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150          
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.110e-42
Identity = 118/158 (74.68%), Postives = 123/158 (77.85%), Query Frame = 0
Query:    8 MTSLSAMSEGDEE-GGGDHDAREAADGSPAADEIRAVQDXXXXXXXKIED-------AEEETAEVVKKIDVVEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRRKEKQLRXXXXXXXXXXXXXXXXXXXXXXXXXEKDRLSRIEQLRANNAPAGI 157
            MTS SAMSEGDEE GGGDHDAREAADGSPAADEIRAVQ XXXXXXX           AEEETAEVVKKID +EAAIAGGS+YLGMTDPEALLKQLGRKE   EQLRRKE             XXXXXXXXXXXX    ++DRLSRIEQLRANNAPAG+
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKE---EQLRRKE----------GKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPAGV 145          
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.100e-41
Identity = 107/149 (71.81%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    8 MTSLSAMSEGDEE-GGGDHDAREAADGSPAADEIRAVQDXXXXXXXKIEDAEEETAEVVKKIDVVEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRRKEKQLRXXXXXXXXXXXXXXXXXXXXXXXXXEKDRLSRIEQLRANNAPA 155
            MTSLSAMSEGDEE GGGDHDAREAAD  PAADEIRAVQD       K EDAE+ETAEVVKKID +EAAIAGGSRYLGMTDPEALLKQLGRKE++            XXXXXXXXXXXXXX           ++DR SRIEQLRANNAPA
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQX-----------XXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPA 138          
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.790e-31
Identity = 108/165 (65.45%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    1 MVYPVRGMTSLSAMSEGDEE-GGGDHDAREAADGSPAADEIRAVQDXXXXXXXKIEDAEEETAEVVKKIDVVEAA-IAGGSRYLGMTDPEALLKQLGRKEDEKEQLRRKEKQLRXXXXXXXXXXXXXXXXXXXXXXXXXEKDRLSRIEQLRANNAPAGIEASHYV 163
            MVYPVRG+TSLSA+SEG+EE GGGDHD REAA GSPAADEIRAVQ XXXXXXX              KID VEAA IAGGS YLGMTDPEALLK       EKE+L              XXXXXXXXXXXXXXX    ++ RL  IEQ RANNAPAG EASHYV
Sbjct:    1 MVYPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLK-------EKERL-------------GXXXXXXXXXXXXXXXQVLVKEKRLFSIEQRRANNAPAGTEASHYV 145          
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 2.970e-28
Identity = 74/99 (74.75%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    3 YPVRGMTSLSAMSEG-DEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXKIEDAEEETAEVVKKIDVVEAAIAGGSRYLGMTDPEALLKQLGRKEDE 100
            YPV GMTSLSAMSEG +EEGGGDH AREAADGSPAADEIRAVQ XXXXXXX                D +EAAIAGGSRYLGMTDPEALLKQLGRKE++
Sbjct:   71 YPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEEQ 169          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPP1_ECTSI3.600e-4375.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI1.110e-4274.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI1.100e-4171.81Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI1.790e-3165.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM56_ECTSI2.970e-2874.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..74
NoneNo IPR availableCOILSCoilCoilcoord: 90..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:117919..135136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16396.1mRNA_C-linearis_contig89.16396.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 117919..135136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16396.1 ID=prot_C-linearis_contig89.16396.1|Name=mRNA_C-linearis_contig89.16396.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=164bp
MVYPVRGMTSLSAMSEGDEEGGGDHDAREAADGSPAADEIRAVQDEIRGV
ERKIEDAEEETAEVVKKIDVVEAAIAGGSRYLGMTDPEALLKQLGRKEDE
KEQLRRKEKQLRELLFKEGQLQQLRREKEQLRELLLKEKDRLSRIEQLRA
NNAPAGIEASHYV*
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