prot_C-linearis_contig88.16387.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16387.1
Unique Nameprot_C-linearis_contig88.16387.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length55
Homology
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 4.420e-21
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLI 52
            ++LR+ACDACHRMKRKCDG  PC RC RRSR C YSYKQKSGPPKGSKRKLI
Sbjct:  205 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLI 256          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.420e-21
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLI 52
            ++LR+ACDACHRMKRKCDG  PC RC RRSR C YSYKQKSGPPKGSKRKLI
Sbjct:  181 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLI 232          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A5N6U4X0_9EURO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Aspergillus avenaceus TaxID=36643 RepID=A0A5N6U4X0_9EURO)

HSP 1 Score: 58.5 bits (140), Expect = 1.270e-8
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRK 50
            LR AC+ CHRMK +C G  PC+RC     DC YS+  K G PKGS+ K
Sbjct:   27 LRRACNLCHRMKLRCSGTSPCSRCHDAGSDCVYSFAAKIGKPKGSRNK 74          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.420e-6
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGP 43
            LR  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP
Sbjct:   53 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGP 93          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.420e-6
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGP 43
            LR  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP
Sbjct:  179 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGP 219          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A836CEN4_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.950e-6
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIE 53
            ++AACD CHR KRKC G  PC+RC+ +   C +S + K GP +  KR++ E
Sbjct:   40 VKAACDHCHRRKRKCSGTEPCSRCQAKGIVCVFSMRSKRGPKR--KRRVSE 88          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 3.600e-6
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    4 RAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGP 43
            R  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP
Sbjct:   56 RTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGP 95          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A2H3J9L9_WOLCO (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J9L9_WOLCO)

HSP 1 Score: 46.6 bits (109), Expect = 1.440e-5
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    6 ACDACHRMKRKCDGKHP-CTRCERRSRDCFYSY-KQKSGPPKGSKR 49
            ACD+C + K +CDG+ P C+ C     +C Y+  + KSGPPKGSKR
Sbjct:    7 ACDSCRKRKLRCDGRTPSCSNCSLYEANCHYAAGRNKSGPPKGSKR 52          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: A0A2T2N916_CORCC (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2N916_CORCC)

HSP 1 Score: 48.5 bits (114), Expect = 4.450e-5
Identity = 23/46 (50.00%), Postives = 26/46 (56.52%), Query Frame = 0
Query:    4 RAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKR 49
            R ACD C   K +CDG HPC+RCE  S DC Y        PKG +R
Sbjct:    8 RRACDPCSVRKVRCDGNHPCSRCEAASWDCTYLKTHGKSGPKGPRR 53          
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Match: UPI001B36BE9F (uncharacterized protein n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B36BE9F)

HSP 1 Score: 47.8 bits (112), Expect = 8.350e-5
Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    6 ACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKG 46
            AC+ C R K +CDGK PC+RC+++  +C Y  + ++ PP G
Sbjct:    5 ACEPCRRRKIRCDGKIPCSRCDKKPSECVYRLRTRATPPDG 45          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LM00_ECTSI4.420e-2182.69Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE4.420e-2182.69Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A5N6U4X0_9EURO1.270e-854.17Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G645_ECTSI1.420e-656.10Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5J8L2_9PHAE1.420e-656.10Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A836CEN4_9STRA1.950e-647.06Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G644_ECTSI3.600e-655.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A2H3J9L9_WOLCO1.440e-550.00Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A2T2N916_CORCC4.450e-550.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
UPI001B36BE9F8.350e-543.90uncharacterized protein n=1 Tax=Cryphonectria para... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 1..44
e-value: 1.5E-7
score: 41.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 6..40
e-value: 5.9E-10
score: 39.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 6..33
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 6..35
score: 10.667
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 2..55
e-value: 5.1E-12
score: 47.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 4..41
NoneNo IPR availablePANTHERPTHR31069:SF20coord: 2..53
NoneNo IPR availablePANTHERPTHR31069FAMILY NOT NAMEDcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:741577..741741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16387.1mRNA_C-linearis_contig88.16387.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 741577..741741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16387.1 ID=prot_C-linearis_contig88.16387.1|Name=mRNA_C-linearis_contig88.16387.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=55bp
MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRK
LIEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf