prot_C-linearis_contig88.16384.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16384.1
Unique Nameprot_C-linearis_contig88.16384.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length710
Homology
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: D7G884_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G884_ECTSI)

HSP 1 Score: 608 bits (1568), Expect = 8.250e-209
Identity = 383/657 (58.30%), Postives = 425/657 (64.69%), Query Frame = 0
Query:    1 MGIMAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKKASKRLPFSLACKKSAEERHRREMLGEADPIEGGAAASGGPDEASSDVAGMLRSAMDDEDSTIEDKEQGQAQEKSATNGVATARP-TRPSSAPPARGRRPQ----LNTGNNESSPQTSAXXXXXXXXXXXXVINGEEDAGV---DGDSFGKDSHDLEGFDDLEGEAAEAFSYDHYPAAGSPEEPEWFHTPWCGTNSGDIPVLDKVFEKAPVGGGDAPTMTQRVPLVPMSAPAALSSRGVSGKSA---------------GGEDTSSFVEHS-DTGGSSTKVEEITSAHPPRRERGHPDGGDGKAGVTIELSPVARGAGDXXXXXXXXXXXXXXXXXGEDGRGSARRSPRRASGGVSSPRVIAGGGELKRYDWGGADVVPTKPSLVAASKIPTGTRADKQRFRNARRKDANKK 633
            MGIMAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEE L  LA+QHR KL++L+ EL+EDE KV  SFERERA +L KQEKQFVQLVDDAIKRAIGKSK      KYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRL+ESAAWEEKAAELDA+HLD WREEVAASLTASAWGGSSSALDQLA++HQREISRMETAQAN WTLMLMRH+TARRNCHN IMVE+KK                                             DV GMLR+ ++DE S   + E  +AQ    + G A  RP TRPSSAPPARG+RPQ        NN++  +T A               G  D GV   D DSFGKDSHDL GFD+LEGEA + FSYD YPAAGSPEEPEW HTPWCGTNSGDIPVLDKV +K  +     P +   +P    SAP + S+  V G +A                GED     EH  D G   +  E       P    G    GD  A V+  LS    GA                     DG GS R SP     G +SPR +AGGGEL+RY+W GAD  PTKPSL+  S+IPTG RADKQRFRNA+R+DAN+K
Sbjct:    1 MGIMAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEELAALAIQHREKLASLEQELKEDEQKVSRSFERERAVLLRKQEKQFVQLVDDAIKRAIGKSK------KYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLDESAAWEEKAAELDANHLDSWREEVAASLTASAWGGSSSALDQLATEHQREISRMETAQANGWTLMLMRHQTARRNCHNVIMVERKK---------------------------------------------DVEGMLRNVIEDEGSATGEAEGKEAQ---PSGGTAAGRPPTRPSSAPPARGKRPQPAAATTKNNNQNLSETVAAPPSATEKAGEGENVGAADEGVHVDDDDSFGKDSHDLRGFDELEGEAWKKFSYDDYPAAGSPEEPEWIHTPWCGTNSGDIPVLDKVSDKKVLDSDGTPMVQLVLPASTASAPPSSSAGRVDGNTATQPVVRGGGASEGFGDGEDKGVIAEHKRDVGSPRSGAEGGADKGRPCSATGELFTGDAAAAVS-PLSFAGEGAERDSQV---------------DGGGSGR-SPGSVGDGFTSPRALAGGGELRRYNWLGADAAPTKPSLLTTSRIPTGNRADKQRFRNAKRQDANRK 586          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A836CD74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD74_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.280e-84
Identity = 149/243 (61.32%), Postives = 182/243 (74.90%), Query Frame = 0
Query:    4 MAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKK 246
            M+KLKKLQKERLIVARLGFP+KAMEIDE ++KIR DL++ER   D R+L   L  L   H A+  AL+  + E+E ++RG F  E+  +  K + +F+ LV  A KRAIG+SKSCSC KKYLC HNKTAS+NTRRPKK+VIH+R+NA RL+HGGRLEE+ AWEEKAAELDA HL++WRE VA SL ASAWGGSSSALD L  +HQ E+ ++E  Q+N W LM M H   RRN  N + VE KK
Sbjct:   77 MSKLKKLQKERLIVARLGFPEKAMEIDEMVQKIRDDLKTERAAEDERVLMVELERLQEAHAARAEALEQRIGEEEQQMRGKFCEEQRRLRKKHDSEFLDLVTAATKRAIGRSKSCSCTKKYLCTHNKTASYNTRRPKKDVIHYRRNASRLKHGGRLEEAKAWEEKAAELDARHLEQWREHVARSLAASAWGGSSSALDHLGERHQHELEQLEVGQSNRWRLMTMHHAVLRRNLGNTMAVEVKK 319          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A6C0BWQ3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BWQ3_9ZZZZ)

HSP 1 Score: 150 bits (378), Expect = 3.510e-35
Identity = 84/248 (33.87%), Postives = 152/248 (61.29%), Query Frame = 0
Query:    1 MGIMAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRN--CHNAIMVEQKK 246
            +  ++ LKKLQKERLI++RLGF +KA  +D+ IE +R   +  R+  + +++ E L  L  ++  K   LD+ ++++ ++            + K   +F++++++A +++IGK KSC+C   YLCHHNKT+S+N R+PK  VI +RKN+KRL+ GGR E++   EEKA E+D +   +W++ +A S+  S W  +   +D+    H++E+  ME  + +E+     + R +RR    HN ++ ++++
Sbjct:   70 LNAISALKKLQKERLIISRLGFAEKAYALDKQIEVMREKAKVVRKAEEEKLMAEMLETLHKKNERKQQRLDAVIKQEHDEXXXXXXXXXXXXIEKHRTEFLKIIENAERKSIGKIKSCNCENDYLCHHNKTSSWNIRKPKPIVILYRKNSKRLKQGGRTEDAIQIEEKADEIDYESQIEWKKNIATSIVQSPWNANEPIIDRTIENHKKELETME--KTHEFKRNAFKERCSRRKFALHNNLITDERR 315          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A836CAU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.910e-33
Identity = 97/276 (35.14%), Postives = 155/276 (56.16%), Query Frame = 0
Query:    7 LKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDL-------ALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDK-WREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKKASKRLPFSLACKKSAEERHRREMLGEAD 274
            +++LQ ERL +AR+GF DKA E++  IE+ R  +  ERE+ +  IL + L+ L       A+ HR +L AL+S L  +  +  G   +E +    K  +++  L+++  +RA G   SC C K+YLC HNKTAS+NTR+P ++VI  R+NA+RLR  GR+EE+  ++ +A  +D D  DK WR  V  S+ +SAW G  S L+QL  + Q ++  +E     +  L+  +              E+KK        + C+++A +R  R++  EAD
Sbjct:   33 IRELQMERLAMARMGFLDKAKEVENVIERERVTMLKEREEREQSILSQKLSSLGKYHHAKAMGHRRRLVALESRLTRELQQFLGKCAKELSDTKDKHRREYEALIEETAQRAYGGVSSCQCRKRYLCRHNKTASYNTRKPTRDVISLRQNAERLRATGRIEEAEEFDRQAQAID-DKADKDWRTRVEQSIVSSAWSGGKSRLEQLVERQQHQLRSVEETHEAKLELVKKQQEIXXXXXXXXXXXERKKVI------MYCRRAALKRMTRDIKEEAD 301          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A6H5JNT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 9.260e-32
Identity = 100/283 (35.34%), Postives = 155/283 (54.77%), Query Frame = 0
Query:    7 LKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDK-WREEV-------AASLT-------ASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKKASKRLPFSLACKKSAEERHRREMLGEAD 274
            L++LQ ERL +AR+GF DKA E++  IE  R   + ERE+ +  IL + L  L + HR +   L+++  E E + R         +  K ++++  L+++  +RA G   SC C K YLC HNKTAS+NTR+P +EVI  R+NA+RLR  GR+EE+  +E +A +LD D  DK WR  V       A S          SAW G  S L+QL  + Q  +  +E     ++ L++ +    RRN  +    E+KK +      + C+++A +R  R++  +AD
Sbjct:   79 LRELQMERLAMARMGFLDKAREVEVWIESERLKTQKEREEKEQAILAQKLGGLDISHRRRFIGLENKQGEGEAQFRAKXXXXXXELRLKHKREYDMLIEETAQRAYGGVSSCQCEKTYLCRHNKTASYNTRKPTREVIRLRQNAERLRATGRVEEAEEFEIQAQDLD-DACDKQWRTRVEQRAKPYACSFLHRTSLWRTSAWSGGKSRLEQLVEKQQHTVKSLEETHEAKYELLVKQQDIQRRNLKSTFEAERKKVA------MYCRRAALKRMTRDIKEDAD 354          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: D8LM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM25_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 6.450e-25
Identity = 82/256 (32.03%), Postives = 138/256 (53.91%), Query Frame = 0
Query:   17 VARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFER---ERATILGKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKKASKRLPFSLACKKSAEERHRREM 269
            +AR+GF DKA E+D  +E  RA L+ ER++ D  +L++ +  L + H  + +A+ S     E ++    E+   E   +  KQ+K++  LV +   RA G   SC C   + C HNK+AS+NTR+P K+VI  R+N +RLR  GRL E+   +  A  ++    D+WR+ V  S+ +SAW G  S L+Q+  + Q  +  + +    +   +  + R  RRN  + +  E+KK        L C++ A +R  +++
Sbjct:    1 MARMGFLDKAEELDVMVEAERARLKKERDQQDQAVLDQKMNGLRMSHTRRSAAMTSA---HEARIASLLEKCATEIEDLKVKQKKEYDVLVGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNGQRLRASGRLAEADEVDNMAVAIEKLAEDQWRKRVEESILSSAWCGGKSRLEQMVERQQATLRALMSTHTEKLARLKQQDRLERRNLVSTLAAERKKVI------LYCRREATKRRTKDI 247          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A835Z9J4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.310e-13
Identity = 76/292 (26.03%), Postives = 124/292 (42.47%), Query Frame = 0
Query:   28 EIDEHIEKIRADLRSEREKVDSRILEEALTDLALQHRAKLSALDSELREDENKVRGSFERE--------------------------------RATIL----------GKQEKQFVQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLEESAA--------------------------------WEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQK 245
            +ID+ I+  R  L++ERE  ++ ++   L  L L H+ +++AL++ L E+   +     +E                                 A+ L           KQ++Q+  LV +   RA G   SC+CA  Y C HNK+AS++TR+P ++VI  R+NA+RLR  GR EE+ +                                 E KAA+ +      WR  V A++ +SAW G  S L+Q+  + Q  ++ +E        L    H   RRN    +  E++
Sbjct:  191 DIDDRIDAERQRLKAEREGKEASLMVHRLAGLELAHKRRITALEARLAEELRSLAARQAQELDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALLCSGLLVVTRAKQKRQYELLVGETATRATGGISSCTCADAYACRHNKSASYSTRKPTRDVIRLRQNAQRLRASGRQEEAESRGRRGLGGSEAPECARAAGERKCGGAHLLACEMENKAADAERAAEAAWRARVEAAIVSSAWAGGKSRLEQMVERQQAVVAALEETHGERAALARKNHGILRRNLLATLNAERR 482          
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Match: A0A6H5KND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.010e-7
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 0
Query:  104 VDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHG---------------------GRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSALDQLASQHQREI 211
            V +   RA G   SC C   + C HNK+AS+NTR+P K+VI  R+N  R RH                      GRL E+   +  A  ++    ++WR+ V  S+ +SAW G  S L+Q+  + Q  +
Sbjct:   60 VGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNVSRPRHSPAEPPLMWLFFVSRGQRLRASGRLAEADEVDNMAVAIEKLAEEQWRKRVEESILSSAWCGGKSRLEQMVERQQATL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G884_ECTSI8.250e-20958.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD74_9STRA1.280e-8461.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6C0BWQ3_9ZZZZ3.510e-3533.87Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A836CAU2_9STRA2.910e-3335.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNT6_9PHAE9.260e-3235.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM25_ECTSI6.450e-2532.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9J4_9STRA1.310e-1326.03SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KND4_9PHAE1.010e-732.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 200..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:707292..712327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16384.1mRNA_C-linearis_contig88.16384.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 707292..712327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16384.1 ID=prot_C-linearis_contig88.16384.1|Name=mRNA_C-linearis_contig88.16384.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=710bp
MGIMAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSR
ILEEALTDLALQHRAKLSALDSELREDENKVRGSFERERATILGKQEKQF
VQLVDDAIKRAIGKSKSCSCAKKYLCHHNKTASFNTRRPKKEVIHFRKNA
KRLRHGGRLEESAAWEEKAAELDADHLDKWREEVAASLTASAWGGSSSAL
DQLASQHQREISRMETAQANEWTLMLMRHRTARRNCHNAIMVEQKKASKR
LPFSLACKKSAEERHRREMLGEADPIEGGAAASGGPDEASSDVAGMLRSA
MDDEDSTIEDKEQGQAQEKSATNGVATARPTRPSSAPPARGRRPQLNTGN
NESSPQTSAPSAAARAAAGGGVINGEEDAGVDGDSFGKDSHDLEGFDDLE
GEAAEAFSYDHYPAAGSPEEPEWFHTPWCGTNSGDIPVLDKVFEKAPVGG
GDAPTMTQRVPLVPMSAPAALSSRGVSGKSAGGEDTSSFVEHSDTGGSST
KVEEITSAHPPRRERGHPDGGDGKAGVTIELSPVARGAGDEGVVAAMSPL
SLAGGKEGEDGRGSARRSPRRASGGVSSPRVIAGGGELKRYDWGGADVVP
TKPSLVAASKIPTGTRADKQRFRNARRKDANKKTISWGENVEVPPESDDD
EDGTDDGEEGTAGGDGEGSDRNNTDASNLDAVADGFVDDDFLKSDDDDDD
DGGRNKERTI
back to top