prot_C-linearis_contig88.16380.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16380.1
Unique Nameprot_C-linearis_contig88.16380.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length400
Homology
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 9.110e-55
Identity = 132/273 (48.35%), Postives = 169/273 (61.90%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARAGGRSVARFAPPIRESSFPVRKMSVSTRSSGSNLLSDDTTAPVVRGHGDATGEDPPGV-----DVCRRESTHCQDTAA----ASPEAEGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAVVS 276
            L +LPIR GY RSS +SL IH C H  AC GAT++ S+ DYC +GY GPYC VC EG+G G  NTC S   TK R L+A GSLFAL +LL +++ V +LVGGLDAV  +RRS++    RSV       R+SS    K+  S +S G N L+  +     RG G A+ +    V     DV   +S    DT      A P A G   PG  G  +K+K WA+R+P  K+K LVV+WQIL+VF SI++VDFPP YARFLS ID ++FD+G V+S
Sbjct:  893 LASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQDYCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLVILAVVYLVGGLDAVEGLRRSLST---RSVLSG----RDSSS--HKVGSSGKSIGRNALT-GSEVEERRGEGAASRKGVTSVPISEVDVSEMKSDASSDTDGEDDHAPPMARGGDQPGCCGQGEKIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLS 1155          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.210e-52
Identity = 128/284 (45.07%), Postives = 171/284 (60.21%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARA--GGRSVARFAPPIRESSFPVRKMSVSTRSSGSNLLSDDTTAPVVRGHGDATGEDPPG--------------VDVCRRESTHCQDTAA----ASPEAEGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAVVS 276
            L +LP+R GY RS  +SL IH C  S+AC GA ++ S+ DYC +GY GPYCAVCAEG+G G  N+C S   TK R L+A GSLFAL +LL +++ V++LVGGLDAV  +RRS++ +  G RSV       R+SS    K   S++S G + L+ D+ AP  +   +       G              VDV   +S    DT      A P   G   PG  G  +K+K WA+R+P  KIK LVV+WQIL+VF SI++VDFPP YARFLS I+ ++FD+  V+S
Sbjct:  886 LASLPVREGYWRSGGESLTIHQCSPSSACVGAAQISSAQDYCGEGYQGPYCAVCAEGFGRGAGNSCHSCEGTKSRLLIAAGSLFALVILLLIILTVAYLVGGLDAVEGLRRSLSTSFVGDRSVLSG----RDSSS--HKTGSSSKSIGRDRLA-DSVAPTFKVTSEVEERGAEGAASRKGVTSVPVSEVDVSEMKSDASSDTDTEDDNAPPMVRGGGQPGCCGHGEKIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLS 1162          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 5.590e-52
Identity = 128/311 (41.16%), Postives = 165/311 (53.05%), Query Frame = 0
Query:   15 TLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARA---GGRSVARFAPPIRESSFPVRKMSVSTRSSGSNLLSDDTTA---------PVVRGHGDA--------TGEDPP--GVD-----------VCRRESTHCQ----------------DTAAASPEAEGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAVVS 276
            +LP+R G+ RSS +SLVIH C HS+AC GAT + +S DYC  GY GPYCAVCAEGYG G  NTC S T +K R L+A GS+F L           FL+GGLDAV  +R SVAR+    G++  R   P       + + S S R+  ++   DD            P+  G  DA         GED     +D           +  +++  C+                D  AA  EA      G RGL +K+K WASRVP  K+K LVV+WQIL VF SI+ VD+PP Y+RFLS ID +NFD+G + S
Sbjct:  928 SLPVRAGHWRSSEESLVIHGCLHSDACVGATEIVTSDDYCDGGYEGPYCAVCAEGYGKGVGNTCHSCTGSKARLLIAAGSVFFLVAXXXXXXAAVFLIGGLDAVASVRGSVARSLRVPGKTTTRAEQPFPPPGPTLPERSASARNISASRQVDDPAVEFDSGEVGGPITGGGFDAPDDLFGYDNGEDKSDGSIDFSDANLVLPLAIAGKDAAFCERFSVGGGGGSHPPVDADADAAPAEAVAGGQSGSRGLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFS 1238          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.120e-45
Identity = 111/267 (41.57%), Postives = 146/267 (54.68%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARAGGRSVARFAPPIRESSFPVRKMSVSTRSSGSNLLSDDTTAPVVRGHGDATGEDPPGVDVCRRESTHCQDTAAASPEA---EGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAVVS 276
            L +LP+R GY RS  +S  + AC H+ +C GAT V +S DYC  GY GPYCA C  GYG G  NTC S   T+FRWL+  GSLF L  LL L + V FL+GGLDAV  +RR+V+R+   SV    P  R S+      + +   +        T A    G G+                    D+     E    E   +    G+ +K+K W +R+P  K+K LVV+WQIL VF SI+  +FPP YA+FLS+IDFIN DIG++ S
Sbjct:  404 LASLPVREGYWRSGKESATVLACIHAESCAGATHVSTSDDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDGTRFRWLIFAGSLFTLVTLLVLGLAVVFLIGGLDAVEGVRRTVSRS--LSVTTRLPLGRRSASVGSGAAAAAEGAVPGFAHSFTPA-FEEGRGERHSSQGKQXXXXXXXXXTAMDSFNRPGEGWRKEDEKSAACCGIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFS 667          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.920e-43
Identity = 122/322 (37.89%), Postives = 159/322 (49.38%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARA---------GGRSV------------------ARFAPPIRE-----SSFPVRKMSVST----------RSSGSN----------------LLSDDTTAPVVRGHGDATGEDPPGVDVCRRESTHCQDTAAASPEAEGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAVVS 276
            L +LP+R GY RS  +S  + AC H+ +C GAT+V ++ DYC  GY GPYCA C  GYG G  NTC    DT+ RWL+  GSLF L  LL L + + FLVGGLDAV  +RR+V+R+         G RS                   A FAP   E     +SF  ++    T          RSS  +                LL   TT    + H  AT     G            D A      E   +    G+ +K+K WA+R+P  K+K LVV+WQIL VF +I+  +FPP YA+FLS+IDFIN DIG++ S
Sbjct:  853 LASLPVREGYWRSGKESSTVLACIHAESCAGATQVSTAEDYCSSGYEGPYCASCQAGYGTGIGNTCHPCDDTRSRWLILAGSLFTLVTLLVLGLAIVFLVGGLDAVEGVRRTVSRSLSVSTKLPLGRRSASVGSGAAAAAEGAVPGIAASFAPAFEEGKGERNSFQGKQQQQQTAVDFFDDGLLRSSSKSPDTAVGGRNTGRFSGVLLPSATTVSGAQRH--ATLGPSSGXXXXXXXVQADLDRAREGWRKEDEKSAACCGIGEKIKRWAARLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFS 1172          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 6.170e-42
Identity = 112/292 (38.36%), Postives = 152/292 (52.05%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVAR---AGGRSVARFAPPIRESSFPVRKMSVSTRSSGSNLLSDD------------------------TTAPVVRGHGDATGEDP--PGVDVCRRESTHCQDTAAASPEAEG-SAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAV 274
            L +LP+R GY RSS +SLV+H C +S+AC G T++ SS DYC+  Y GPYCAVCAEG   G  +TC   +  K R LM  G +F + ++LFL + + FL+GGLDAV  +R S++R     G+     +    E S   +K S       SN   DD                        T A +  G GD + E P          +     +  A   +A G S+  G  GL  ++K W S +P  K+K LVV+WQIL VF SI+ V FPP Y+RFLS +D +N D+G V
Sbjct:  895 LASLPVREGYWRSSQESLVVHGCLNSDACAGGTQISSSDDYCKDCYEGPYCAVCAEGCCEGSSHTCYRCSGIKSRLLMFAGIVFGVTIVLFLGLAIVFLIGGLDAVNSMRLSMSRKLSVSGKIRGSISRSYHEGSSTSKKPS-----GRSNFGEDDXXXXXXXXXSAAVGDAAVDEEKTRTAAVIGLGPGDYSPERPLSTAATAAAVDRARILEVGARMSDAGGESSRTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQV 1181          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 7.790e-42
Identity = 112/290 (38.62%), Postives = 154/290 (53.10%), Query Frame = 0
Query:   13 LDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGEIRRSVARA---GGRSVARFAPPIRESSFPVRKMSVSTRSS-------------------GSNLLSDD---TTAPVVRGHGDATGED--PPGVDVCRRESTHCQDTAAASPEAEG-SAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISSVDFPPFYARFLSLIDFINFDIGAV 274
            L ++P+R GY RSS +SLV+H C HS+AC GAT++ SS DYC+  Y GPYCAVCAEG   G  +TC   +  K R LM  G +F + ++LFL V + FL+GGLDAV  +R S++R     G+     +    E +  +     S RS+                   G+  + ++   T A    G GD + E            +     +  A   +A G SA  G  GL  ++K W S +P  K+K LVV+WQIL VF SI+ V FPP Y+RFLS ID +N D+G V
Sbjct:  550 LASMPVREGYWRSSQESLVVHGCLHSDACAGATQISSSDDYCKDCYEGPYCAVCAEGCCEGSSHTCHRCSGIKSRLLMFAGIVFGVTIVLFLGVAIVFLIGGLDAVDSVRLSMSRKLSISGKPRGGISRSHHEGTSSISSKRPSGRSNFGGDXXXXXXXXRGRSAAVGNAAVDEEKTRTAAVAGLGPGDYSPERRLSAAATAAAIDRARILEAGARMSDAGGESARTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHV 839          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.130e-13
Identity = 58/151 (38.41%), Postives = 76/151 (50.33%), Query Frame = 0
Query:   15 TLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVS-----FLVGGLDAVGEIRRSVARAGGRSVARFAPPIRESSFPVRKMSVSTRSSGSN 160
            TLP++PGY R+S DS+ I  C + +AC G + V S  +YC  GY GP CAVCA GYG G  N C   T   F+    GG  F LAV   L + V+     +LVGG  AV     +  R   R + R    +  S    R+ + S    GS+
Sbjct: 1090 TLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCAPGYGRGVANACHLCT-ASFK----GGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNT-RESVRMLQRRGSGLLRSEGTNRRFNFSASGDGSS 1234          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.300e-12
Identity = 58/151 (38.41%), Postives = 74/151 (49.01%), Query Frame = 0
Query:   15 TLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAVLLFLVVGVS-----FLVGGLDAVGEIRRSVARAGGRSVARFAPPIRESSFPVRKMSVSTRSSGSN 160
            TLPI+ GY R+S DS+ I  C + +AC G + V S  +YC  GY GP CAVCA GYG G  N C   T   F+    GG  F LAV   L + V+     +LVGG  AV     +  R   R + R    +  S    R+   S    GS+
Sbjct:  979 TLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCT-ASFK----GGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNT-RESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSS 1123          
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.850e-12
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   15 TLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSSSDYCQKGYTGPYCAVCAEGYGAGGDNTC---CSSTDTKFRWLMAGGSLFALAVLLFLVVGVSFLVGGLDAVGE 120
            TLP++ GY R+S DS+ I  C + +AC G + V S  +YC  GY GP CAVCA GYG G  N C    +S      +++A  SL  L V+  L V   +LVGG  AV  
Sbjct:  629 TLPVQSGYWRASLDSVYIRQCFNEDACRGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAV---YLVGGRGAVSN 734          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FRH4_ECTSI9.110e-5548.35Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH3_ECTSI1.210e-5245.07Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH0_ECTSI5.590e-5241.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCK8_9PHAE1.120e-4541.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI2.920e-4337.89Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JS31_9PHAE6.170e-4238.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH1_ECTSI7.790e-4238.62Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JRA9_9PHAE3.130e-1338.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B0_ECTSI1.300e-1238.41Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G0A8_ECTSI3.850e-1243.12Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..399
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..250
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:673691..675340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16380.1mRNA_C-linearis_contig88.16380.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 670374..678345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16380.1 ID=prot_C-linearis_contig88.16380.1|Name=mRNA_C-linearis_contig88.16380.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=400bp
MLREWTASCLDRLDTLPIRPGYKRSSSDSLVIHACRHSNACTGATRVWSS
SDYCQKGYTGPYCAVCAEGYGAGGDNTCCSSTDTKFRWLMAGGSLFALAV
LLFLVVGVSFLVGGLDAVGEIRRSVARAGGRSVARFAPPIRESSFPVRKM
SVSTRSSGSNLLSDDTTAPVVRGHGDATGEDPPGVDVCRRESTHCQDTAA
ASPEAEGSAAPGRRGLVKKLKLWASRVPFAKIKTLVVIWQILAVFLSISS
VDFPPFYARFLSLIDFINFDIGAVVSHRASYLEFRSTVPQAAAYDAGAAR
AGFDAGVHLLPDSEAQGRDRACRRDRKQERLVEALGRRTSADVLGAHVDI
HGSLQDLRLRRGSRRGRERAKRERGISGRTTACLATRMCTSGLWSTPGS*
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