prot_C-linearis_contig88.16378.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16378.1
Unique Nameprot_C-linearis_contig88.16378.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length90
Homology
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BLAST of mRNA_C-linearis_contig88.16378.1 vs. uniprot
Match: A0A6H5JVZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.070e-31
Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = 0 
Query:    1 MPSDFNSWLRRSGKAARDGIADALATISLAENEVTWTGPN-RRKGITAFYGVEAGDEPGATSGGGMDPDGSAAEGTGAPADASQVPLLHIR 90
            MP+ + SWLR+ GK ARDGIADALA  SL ENE  WTGP+ RRKGITAFYGVEAG  P +TSGG M  DGS  EGTGA AD SQVPLLHIR
Sbjct:  123 MPTGYQSWLRQDGKVARDGIADALADASLRENEEKWTGPHQRRKGITAFYGVEAGGVPSSTSGGRMGADGSPTEGTGATADESQVPLLHIR 213
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BLAST of mRNA_C-linearis_contig88.16378.1 vs. uniprot
Match: A0A6H5K590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K590_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 5.530e-6
Identity = 38/92 (41.30%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:    2 PSDFNSWLRRSGKAARDGIADALATISLAENEVTWTGPNRRKGITAFYGV--EAG------DEPGATSGGGMDPDGSAAEGTGAPADASQVP 85
            PS + SWLR S KAARDGIA  LA     +    WTG     G+ AFYGV  EAG        P  +SGGG+          G PA + ++P
Sbjct:   48 PSQYQSWLRDSQKAARDGIAAHLAVDIFDDKR--WTGDCTPNGVVAFYGVGGEAGLRTSDAANPAVSSGGGVQ---------GGPATSPEIP 128
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVZ4_9PHAE1.070e-3172.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K590_9PHAE5.530e-641.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:655105..655374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16378.1mRNA_C-linearis_contig88.16378.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 654776..655374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16378.1 ID=prot_C-linearis_contig88.16378.1|Name=mRNA_C-linearis_contig88.16378.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=90bp
MPSDFNSWLRRSGKAARDGIADALATISLAENEVTWTGPNRRKGITAFYG
VEAGDEPGATSGGGMDPDGSAAEGTGAPADASQVPLLHIR
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