prot_C-linearis_contig87.16314.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig87.16314.1
Unique Name	prot_C-linearis_contig87.16314.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	143

Homology

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BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5K165_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K165_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.830e-21
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F VPGV Y+CGEQ+MMSE A+L  D +   + MAT+  + H+ LGRK R FD+AEWERRRE+ VLT
Sbjct:  340 WKPPSVFSQWTPSAFDVPGVRYSCGEQFMMSEKAKLFGDMTSYDKIMATTDRKTHKFLGRKVRPFDYAEWERRREEIVLT 419

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5KMH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.570e-21
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQYMMSENA+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:  257 WKPPSVFSQWTPSAFDVLGVRYSCGEQYMMSENAKLFGDMTSYEKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 336

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5KFN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN1_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.960e-20
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLTV 81
            WKPP   S  TP  F+V G+ Y CGEQ+MM+E AR+  D + C++ MATS P++H++LGRK R +DHA WE RRED V ++
Sbjct:  428 WKPPSFLSIWTPCEFSVHGIRYVCGEQFMMAEKARIFGDDAACAKIMATSDPREHKSLGRKVRRYDHALWELRREDIVFSL 508

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5L3B4_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B4_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 7.770e-20
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:   82 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDLTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 161

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5KWH8_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH8_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.050e-19
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + M  + P+ ++ LGRK R FD+AEWERRRE+ VLT
Sbjct:    7 WKPPSGFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRKVRPFDYAEWERRREEIVLT 86

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.330e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:   82 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 161

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5JFD5_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.370e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:  432 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 511

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5K4L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4L7_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.400e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:  175 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 254

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5K8W4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W4_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.430e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:  599 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 678

[Close]

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Match: A0A6H5K6L2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L2_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.450e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRKYRNFDHAEWERRREDFVLT 80
            WKPP  FS  TPS+F V GV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWERRRE+ VLT
Sbjct:   82 WKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLT 161

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot

BLAST of mRNA_C-linearis_contig87.16314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K165_9PHAE	4.830e-21	60.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KMH8_9PHAE	6.570e-21	60.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KFN1_9PHAE	3.960e-20	53.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L3B4_9PHAE	7.770e-20	57.50	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5KWH8_9PHAE	1.050e-19	56.25	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5JDD1_9PHAE	1.330e-19	57.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFD5_9PHAE	1.370e-19	57.50	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5K4L7_9PHAE	1.400e-19	57.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8W4_9PHAE	1.430e-19	57.50	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K6L2_9PHAE	1.450e-19	57.50	Integrase catalytic domain-containing protein (Fra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012816	NADAR	PFAM	PF08719	DUF1768	coord: 4..81 e-value: 6.6E-14 score: 52.5
IPR037238	YbiA-like superfamily	GENE3D	1.10.357.40		coord: 1..84 e-value: 1.5E-9 score: 39.5
IPR037238	YbiA-like superfamily	SUPERFAMILY	143990	YbiA-like	coord: 4..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig87	contig	C-linearis_contig87:685838..686266 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig87.16314.1	mRNA_C-linearis_contig87.16314.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig87 685838..686266 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig87.16314.1 ID=prot_C-linearis_contig87.16314.1|Name=mRNA_C-linearis_contig87.16314.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=143bp
WKPPFCFSNGTPSSFTVPGVLYTCGEQYMMSENARLSNDSSICSQTMATS
RPQDHQALGRKYRNFDHAEWERRREDFVLTVPIHTPNSRKIPFCVNTYRL
PGIAPSRRLVPSPTCGVLVLLHVTPTLLSLPVGLVATCLERL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012816	NADAR
IPR037238	YbiA-like_sf