prot_C-linearis_contig87.16311.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16311.1
Unique Nameprot_C-linearis_contig87.16311.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length113
Homology
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Match: A0A6H5JIF1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF1_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.570e-8
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    1 MDPRDKNRKRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGVPPPPRLYS-GADRAMNCPVLAAIGTSQPSRRTRAGLVNPPA 90
            +D + K RK   A N+GY   +E  LS+ A  KA+ I+ G+R AAR+ G+P        GADR M+CPV+AAI  S    RTR+     PA
Sbjct:   46 LDSKRKGRK--AAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHEGLRTRSSATTNPA 134          
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.700e-7
Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 0
Query:    1 MDPRDKNRKRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGVPPPPRLYS-GADRAMNCPVLAAIGTSQPSRRTRAGLVNPPA----EPADDQRQPPQPESLIA 107
            +D + K RK   A N+GY   +E  LS+ A  KA+ I+ G+R AAR+ G+P        GADR M+CPV+AAI  S    RTR+     PA    EP  D R     ES +A
Sbjct:   46 LDSKRKGRK--AAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHEGLRTRSSATTNPAANNPEPQPDWRD--SSESFLA 153          
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Match: A0A6H5JIB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB0_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.710e-7
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    1 MDPRDKNRKRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGVPPPPRLYS-GADRAMNCPVLAAIGTSQPSRRTRAGLVNPPA 90
            +D + K RK   A N+GY   +E  LS+ A  KA+ I+ G+R AAR+ G+P        GADR M+CPV+AAI  S    RTR+     PA
Sbjct:   46 LDSKRKGRK--AAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHEGLRTRSSATTNPA 134          
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Match: A0A6H5JR76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR76_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.920e-7
Identity = 33/63 (52.38%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    9 KRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGVPPPPRLYSGADRAMNCPVLAA 71
            KR  ARNSG     E  LS  A  KA+EI+ G+REAARR GVP       GAD  M+CPV+ A
Sbjct:  221 KRAAARNSGTSEACEADLSKVAREKADEIMKGKREAARRAGVPQARGQGGGADSHMSCPVIRA 283          
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Match: A0A6H5KYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.400e-5
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 0
Query:    9 KRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGVPPPPRLYSGADRAMNCPVL 69
            KR  ARNSG     E  LS  A  KA++I+ G+RE ARR GVP       GAD  M+CPV+
Sbjct:   53 KRAAARNSGTSEACEADLSKVAREKADKIMKGKREGARRAGVPQARGRGGGADSHMSCPVI 113          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JIF1_9PHAE4.570e-842.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDQ3_9PHAE1.700e-741.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JIB0_9PHAE2.710e-742.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR76_9PHAE7.920e-752.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYP1_9PHAE2.400e-549.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:651541..652134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16311.1mRNA_C-linearis_contig87.16311.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 651541..652353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16311.1 ID=prot_C-linearis_contig87.16311.1|Name=mRNA_C-linearis_contig87.16311.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=113bp
MDPRDKNRKRVLARNSGYPAPNEQALSSAAFTKANEILDGRREAARRLGV
PPPPRLYSGADRAMNCPVLAAIGTSQPSRRTRAGLVNPPAEPADDQRQPP
QPESLIAPAPLTA
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