prot_C-linearis_contig87.16297.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16297.1
Unique Nameprot_C-linearis_contig87.16297.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length134
Homology
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A6H5K1C9_9PHAE (Ribosomal_L18A domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1C9_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.200e-85
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            MHQMRKMKKTTGEILDIVELTEKN+RI+KNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYS+MAGRHRCRPRSIQIIRTGIV AKDTKR D++QFH+A IKFPLTHRLPRAPKKKFRTTFKASRPTTFLG
Sbjct:   73 MHQMRKMKKTTGEILDIVELTEKNSRIIKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSQMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVKQFHSAKIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 205          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A835YZJ5_9STRA (Ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ5_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.040e-75
Identity = 110/132 (83.33%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    2 HQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            HQMRKMKKTTGEILD+ E+ EKNARI+K+YGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIV AKDTKR  ++QF N+ IKFPL HR+PR P KKFRT FKA RP TF G
Sbjct:   77 HQMRKMKKTTGEILDVNEIVEKNARIIKHYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRAPVKQFQNSQIKFPLAHRIPREPSKKFRTVFKAQRPNTFFG 208          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A0P5MN57_9CRUS (60S ribosomal protein L18a n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5MN57_9CRUS)

HSP 1 Score: 208 bits (529), Expect = 1.610e-66
Identity = 96/133 (72.18%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILD+ ELTEKN R++ NYGIW+RY+SRSGTHNMY+EYR LTL  AV+Q+YSE+AGRHR RPRSIQI+RT IV AKDTK+ ++Q FH++NIKFPL+HR+PR   K  RTTFKASRP+TF G
Sbjct:   48 LHQMKKMKKTTGEILDVNELTEKNKRVINNYGIWIRYNSRSGTHNMYKEYRSLTLNNAVEQLYSELAGRHRARPRSIQIMRTAIVAAKDTKKANVQMFHDSNIKFPLSHRIPRPSIKNHRTTFKASRPSTFRG 180          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A8K1FN02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN02_PYTOL)

HSP 1 Score: 207 bits (526), Expect = 4.050e-66
Identity = 97/133 (72.93%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILDI E+TEKN R+V NYGIW+RY+SRSGTHNMY+EYRD+TL  AV+Q+Y+E+AGRHR RPRSIQI+RT IV AKDTK+ ++QQFH+ANIKFPL+HR+PR   K  RT FKASRP TF G
Sbjct:   44 LHQMKKMKKTTGEILDINEITEKNNRVVNNYGIWIRYNSRSGTHNMYKEYRDVTLCSAVEQLYAELAGRHRARPRSIQIMRTAIVAAKDTKKGNVQQFHDANIKFPLSHRIPRPSIKNHRTVFKASRPCTFRG 176          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A2D4C8D4_PYTIN (60S ribosomal protein L18a n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8D4_PYTIN)

HSP 1 Score: 213 bits (543), Expect = 4.150e-66
Identity = 100/133 (75.19%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILD+ EL EKN RIVKNYGIW+RY+SRSGTHNMY+EYRDLTL GAVDQ+YSE+AGRHR RPRSIQI+RT +V AKDTK+ ++QQFH++ IKFPL+HR+PR   K  RT FKASRPTTF G
Sbjct:  241 LHQMKKMKKTTGEILDVNELVEKNKRIVKNYGIWIRYNSRSGTHNMYKEYRDLTLCGAVDQLYSELAGRHRARPRSIQIMRTAVVAAKDTKKANVQQFHDSKIKFPLSHRIPRPSIKNHRTVFKASRPTTFRG 373          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A7S2XX70_9STRA (60S ribosomal protein L18a n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX70_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.650e-65
Identity = 94/132 (71.21%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    2 HQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            HQMRKMKKTTGEI+D+ E+TEKN+R+VKNYGIW+RY+SRSGTHNM+RE+RDL LTGAVDQ+Y+EM+GRHR R  S+QIIRT +++AKD KR +I Q+H++ IKFPLTH++ RAP KK RTTFKA+RPTT+ G
Sbjct:   45 HQMRKMKKTTGEIVDVNEITEKNSRVVKNYGIWIRYNSRSGTHNMFREFRDLKLTGAVDQLYAEMSGRHRARFSSVQIIRTAVLDAKDCKRPNITQYHDSKIKFPLTHQIRRAPAKKHRTTFKATRPTTYYG 176          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: K3WCT5_GLOUD (60S ribosomal protein L18a n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCT5_GLOUD)

HSP 1 Score: 204 bits (520), Expect = 3.320e-65
Identity = 97/133 (72.93%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILD+ ELTEKN RIV NYGIW+RY+SRSGTHNMY+EYRD+TL  AV+QMYSE+AGRHR RPRSIQI+RT IV AKDTK+ ++QQFH++ IKFPL+HR+ R   K  RT FKA+RPTTF G
Sbjct:   44 LHQMKKMKKTTGEILDVNELTEKNKRIVNNYGIWIRYNSRSGTHNMYKEYRDVTLCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDTKKLNVQQFHDSKIKFPLSHRIARPSTKNQRTVFKANRPTTFRG 176          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: M4BR55_HYAAE (60S ribosomal protein L18a n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4BR55_HYAAE)

HSP 1 Score: 204 bits (519), Expect = 4.710e-65
Identity = 95/133 (71.43%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILDI ELTEKN+R++ NYGIW+RY+SRSGTHNMY+EYRD+T+  AV+QMYSE+AGRHR RPRSIQI+RT IV AKD+K+ ++QQFH++ I FPL+HRLPRA +K  +T FKASRP TF G
Sbjct:   44 LHQMKKMKKTTGEILDINELTEKNSRVINNYGIWIRYNSRSGTHNMYKEYRDVTMCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDSKKLNVQQFHDSKIAFPLSHRLPRAAEKHQKTVFKASRPCTFRG 176          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: H3H534_PHYRM (60S ribosomal protein L18a n=3 Tax=Phytophthora TaxID=4783 RepID=H3H534_PHYRM)

HSP 1 Score: 204 bits (519), Expect = 4.710e-65
Identity = 95/133 (71.43%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 133
            +HQM+KMKKTTGEILD+ ELTEKN RIVKNYG+W+RY+SRSGTHNMY+EYRDLTL  AV+QMY+E+AGRHR RPRSIQI+RT IV AKDT++  ++Q+H++ I FPL+HRLPRAP+K   + FKASRP TF G
Sbjct:   44 LHQMKKMKKTTGEILDVNELTEKNRRIVKNYGVWIRYNSRSGTHNMYKEYRDLTLCKAVEQMYAELAGRHRARPRSIQIMRTAIVAAKDTQKHGLKQYHDSKISFPLSHRLPRAPEKHLNSVFKASRPCTFRG 176          
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Match: A0A8D0YIJ2_PIG (60S ribosomal protein L18a n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0YIJ2_PIG)

HSP 1 Score: 202 bits (513), Expect = 1.650e-64
Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
Query:    1 MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHNANIKF 105
            MHQMRKMKKTTGEILDI+E+TEKNARI+KNYGIWLRYDSRSGTHNMYREYRDL+LTGAVDQMYSEMAGRHRCRPRSIQIIRTGIV AKDTKR D+QQFHNA I F
Sbjct:   45 MHQMRKMKKTTGEILDIIEITEKNARIIKNYGIWLRYDSRSGTHNMYREYRDLSLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVQQFHNAKINF 149          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1C9_9PHAE1.200e-8593.23Ribosomal_L18A domain-containing protein n=2 Tax=E... [more]
A0A835YZJ5_9STRA1.040e-7583.33Ribosomal protein L18 n=1 Tax=Tribonema minus TaxI... [more]
A0A0P5MN57_9CRUS1.610e-6672.1860S ribosomal protein L18a n=2 Tax=Daphnia magna T... [more]
A0A8K1FN02_PYTOL4.050e-6672.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C8D4_PYTIN4.150e-6675.1960S ribosomal protein L18a n=1 Tax=Pythium insidio... [more]
A0A7S2XX70_9STRA1.650e-6571.2160S ribosomal protein L18a n=1 Tax=Fibrocapsa japo... [more]
K3WCT5_GLOUD3.320e-6572.9360S ribosomal protein L18a n=1 Tax=Globisporangium... [more]
M4BR55_HYAAE4.710e-6571.4360S ribosomal protein L18a n=19 Tax=Peronosporacea... [more]
H3H534_PHYRM4.710e-6571.4360S ribosomal protein L18a n=3 Tax=Phytophthora Ta... [more]
A0A8D0YIJ2_PIG1.650e-6491.4360S ribosomal protein L18a n=1 Tax=Sus scrofa TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02113860S ribosomal protein L18a/ L20, eukaryotesPIRSFPIRSF002190Ribosomal_L18acoord: 1..132
e-value: 6.7E-52
score: 173.4
NoneNo IPR availableGENE3D3.10.20.10coord: 27..101
e-value: 3.2E-37
score: 128.6
NoneNo IPR availablePANTHERPTHR10052:SF160S RIBOSOMAL PROTEIN L18Acoord: 2..132
NoneNo IPR availableSUPERFAMILY160374RplX-likecoord: 27..100
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 1..81
e-value: 1.8E-34
score: 118.4
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 2..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:520990..523270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16297.1mRNA_C-linearis_contig87.16297.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 520942..524153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16297.1 ID=prot_C-linearis_contig87.16297.1|Name=mRNA_C-linearis_contig87.16297.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=134bp
MHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREY
RDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVEAKDTKRTDIQQFHN
ANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR023573Ribosomal_L18a//L18Ae/LX
IPR02887750S_L18Ae/Ribosomal_L18a/L20