prot_C-linearis_contig87.16295.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16295.1
Unique Nameprot_C-linearis_contig87.16295.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1271
Homology
BLAST of mRNA_C-linearis_contig87.16295.1 vs. uniprot
Match: D8LL38_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL38_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 8.310e-133
Identity = 562/1268 (44.32%), Postives = 633/1268 (49.92%), Query Frame = 0
Query:   94 APALE-ASPRLWALLREAQEEMERGTDVLGDELDILWQNVREGATDCGRETE-------------YMVAAGXXXXXXXXXXXXXXXXXXXGQRLPRREADVLLDGLEALQAEMEAEARNFQRQKAELMRKIK-ALPIGGGRDG--NGEAGLGDVEGRPRRGKQNSPAGMVMELEEEAESMRTAVIASHARLLGRLQGVPRGRAGGEERRATRTRTTXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXREGSGHSATVAMHGGHGDGNSSGIGLDNLVDSAQAVLGAREELDELKGAVEAARDEAAIEREKAHNAQEQASRLESLRLSAASAARRAHRSAKKAKAEADNQGRALETERERGAASXXXXXXXXXXXXXESEE-----------LQHRLAYLRAETEGLERRLREASKELEEREARAEXXXXXXXXXXERLADCRDSFGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQAXGEKRVRGMREATVELEGLRSEIADVXXXXXXXXXXXXXXXXXTEDKLACVEEAETAAVSLGRRAAELQVQAEDLEAARDRARAEVESARRRQAEELSRWKEAMEERRQEFERFSGLVRDKAAALSDLEKQAKAESARSRQAQCEQEAASARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVQAVAA-------RARQQLADLTEKRRDEESAVAAXXXXTAALAREEAELGATAAAARRCGAGGREAAXXXXXXLAELXXXXXXXXXXXXXXXXESAELEAGVARKREQDRFAREAAEVQQARLDELKREVAALRDERLRAEKGVWALKTEVGLLSTRRDDAARRDRQRERDEGALSARREAIAAAAAREQERLGLETAAKEKLEVEVAELDARADTLRDEVARATQDGAALREDASAAASRASEARAILAEDEKETARLASRVEMLRATKAALDSELSGLRHEIDSLRRGNSSG---------LASRGAGWTNGEGSGLLPGGTLLVEGXXXXXXYSVEKGGGLPSAGRATRRGKMRAGRGEEDGSDVGXXXXXXXX--------------NLVEIVAEFQGRLRRQVQAALADGGV-------------------SSFHNGAENPSAQRPSSLSRVSV--------GPVRVR---QAREDQSGV-FPQGRRQRDVAFSGRAGGSCD--DVIGELEQRIGSV 1270
            A A+E  SPRLW LLREAQEEMERGTDVLGDEL+ILW+NVREGA D GR                      XXXXXXXXXXXXXXXXXXX  +LPRR+AD LL GLE LQAEME +A +FQRQ+  LMRKI+ +L +G  R    N E    + +G  R  ++     ++  LEEEAESMR AVIASHARLLGR++      A     +A+ T                   G                  G  HS      GG G GN S   LD+LVDSAQAVL AREEL EL+ AVE  RDE + EREK+  A+ QASRLES R SAA AA RA+R A KA+AEA+         R+R A +               EE           L  RL  LR E E LE    EAS+ LE REAR  XXXXXXXXXXERLADCRDSFGLE                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   X                      A+V                                              E LE ARDR   E E+ARRRQAEELSRWKEAM ER+QEFERFS +VR KA++L DLEK+A+  +ARSRQAQ +QEA     X                     XXXXX                                    +AVQA AA       RARQQLAD TE+RR+EE AV A X   AALARE+AEL +TA A +   A  RE  XXX   LAEL                ES+ELEAGVAR+REQ+RFAR AAE QQARLD+LKREVAALRDE LRAEK VW+LK+EV  LS RRD+A+RRDR                         RL + T A+E+LE E+ ELDARA  LR EVARATQDGAALREDASAAA                   LAS+ E LRATK ALDSEL+GLRHE+D LRR                    GW       LL    L VE XXXXXX                                  XXXXXXXX              NLVEIVAEFQGRLRRQVQAALADG                          G+ + +  + SS S+V+          P R R   QA  D  G      RR  D  FSGRA G     DV+GELE+RIGSV
Sbjct:    8 AAAMERGSPRLWTLLREAQEEMERGTDVLGDELNILWRNVREGAAD-GRGDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPRRQADALLQGLEKLQAEMEVQAASFQRQRNGLMRKIQQSLAVGERRQHKHNSEGAAREGKGGTRERRRKKCDKILERLEEEAESMRAAVIASHARLLGRVRETASNAA-----KASAT-----------------AGGAVAGIGRERSATMGVVVRGGDHS------GGCGGGNRSRGSLDDLVDSAQAVLAAREELAELRVAVEETRDELSAEREKSRAARRQASRLESFRSSAAVAATRANRDADKARAEAERLALEAAAARDRAATAAEQEARQLSSRRCAEEEAEGAAAAAESELLGRLGSLRGEAEELEXXXXEASRXLERREARXXXXXXXXXXXXERLADCRDSFGLEIEGLQKGVGELEAEAVGWRGALEAARSRLEAEEERGRTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEV----------------------------------------------EGLEFARDRVAEETEAARRRQAEELSRWKEAMAERQQEFERFSRMVRSKASSLGDLEKEAEGRAARSRQAQRDQEAXXXXXXAALDAARNAASLAERGRDKAEXXXXXAEAAESRTVHAEEELRRVTAEIGSERACLDKARTDLQAVQATAAELEAENSRARQQLADATERRREEEGAVEAAXQRAAALAREKAELSSTAVAVQLQSASEREXXXXXRNELAELREAADRERRTLEGFRDESSELEAGVARRREQERFARGAAEAQQARLDDLKREVAALRDEHLRAEKSVWSLKSEVSSLSARRDNASRRDRXXXXXXXXXXXXXXXXXXXXXXXXXRLRVATVARERLEAEMDELDARACDLRAEVARATQDGAALREDASAAAXXXXXXXXXXXXXXXXXXXLASQAETLRATKRALDSELAGLRHELDFLRRRRDGDGXXXXXXXXXXXXXLGWKEKRVEHLL----LPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDGGNLVEIVAEFQGRLRRQVQAALADGDXXXXXXXXXXTCSADVGDDDGRIRRGSTSAAVAQSSSFSQVTTVGLVDDGDAPPRARLRRQAPADSRGASLITHRRLNDGPFSGRAAGGRGGGDVLGELEKRIGSV 1196          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL38_ECTSI8.310e-13344.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 717..746
NoneNo IPR availableCOILSCoilCoilcoord: 417..437
NoneNo IPR availableCOILSCoilCoilcoord: 182..209
NoneNo IPR availableCOILSCoilCoilcoord: 766..800
NoneNo IPR availableCOILSCoilCoilcoord: 1004..1038
NoneNo IPR availableCOILSCoilCoilcoord: 456..511
NoneNo IPR availableCOILSCoilCoilcoord: 808..842
NoneNo IPR availableCOILSCoilCoilcoord: 361..402
NoneNo IPR availableCOILSCoilCoilcoord: 601..702
NoneNo IPR availableCOILSCoilCoilcoord: 871..947
NoneNo IPR availableCOILSCoilCoilcoord: 1067..1087
NoneNo IPR availableCOILSCoilCoilcoord: 557..579
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 427..1075
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 427..1075

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:507929..514800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16295.1mRNA_C-linearis_contig87.16295.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 507078..514800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16295.1 ID=prot_C-linearis_contig87.16295.1|Name=mRNA_C-linearis_contig87.16295.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1271bp
MRVTPDAVVRPVRRQKKAAARLPLPPPPPRRRSRGHHQHHHRPPVFGEEN
EDDDNNALVQQSSRRWRRRRRRRPATETVLAASAAAETVTAAPAPALEAS
PRLWALLREAQEEMERGTDVLGDELDILWQNVREGATDCGRETEYMVAAG
AGGGGGGGGGGSGSGGRGNGQRLPRREADVLLDGLEALQAEMEAEARNFQ
RQKAELMRKIKALPIGGGRDGNGEAGLGDVEGRPRRGKQNSPAGMVMELE
EEAESMRTAVIASHARLLGRLQGVPRGRAGGEERRATRTRTTAATTTASA
SAATTASYGFTAGAAGTATAAGSRNREGSGHSATVAMHGGHGDGNSSGIG
LDNLVDSAQAVLGAREELDELKGAVEAARDEAAIEREKAHNAQEQASRLE
SLRLSAASAARRAHRSAKKAKAEADNQGRALETERERGAASRRRRAAEDA
AAAAESEELQHRLAYLRAETEGLERRLREASKELEEREARAEAAAAAAER
EEERLADCRDSFGLEVEGLQKGVGELESEAVGWRGAVEAARSRLAAEEER
GRTERLAAQAEVKRLGKEAEKRRAEAKDEEAFLEGLRAQRQAEGEKRVRG
MREATVELEGLRSEIADVRSRLAAGQAELQANAAATEDKLACVEEAETAA
VSLGRRAAELQVQAEDLEAARDRARAEVESARRRQAEELSRWKEAMEERR
QEFERFSGLVRDKAAALSDLEKQAKAESARSRQAQCEQEAASARAEAALR
SAQDAAALAERGKGAAEQEEARAAAAGSRMEHATEELRRVTTELNSESAQ
LGTAQADLKAVQAVAARARQQLADLTEKRRDEESAVAAARQRTAALAREE
AELGATAAAARRCGAGGREAAAAARRELAELRDAADKERRALEEFRDESA
ELEAGVARKREQDRFAREAAEVQQARLDELKREVAALRDERLRAEKGVWA
LKTEVGLLSTRRDDAARRDRQRERDEGALSARREAIAAAAAREQERLGLE
TAAKEKLEVEVAELDARADTLRDEVARATQDGAALREDASAAASRASEAR
AILAEDEKETARLASRVEMLRATKAALDSELSGLRHEIDSLRRGNSSGLA
SRGAGWTNGEGSGLLPGGTLLVEGGGGGGHYSVEKGGGLPSAGRATRRGK
MRAGRGEEDGSDVGGGGGDGGGNLVEIVAEFQGRLRRQVQAALADGGVSS
FHNGAENPSAQRPSSLSRVSVGPVRVRQAREDQSGVFPQGRRQRDVAFSG
RAGGSCDDVIGELEQRIGSV*
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