prot_C-linearis_contig87.16294.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16294.1
Unique Nameprot_C-linearis_contig87.16294.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length91
Homology
BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: Q8QNP5_ESV1K (EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP5_ESV1K)

HSP 1 Score: 86.7 bits (213), Expect = 2.720e-19
Identity = 47/79 (59.49%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    7 CARGKRXXXXXXXTSDSRASLEPGDTHVYIVTPEKIAFPFPVDKRTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDF 85
            C R K              +LEPGDT VYI T   +AFP  VDKRTPLEAI DGC LSLL++KRVDRTFVE AY EVD+
Sbjct:   91 CHRRKTCLEAGGLPRTVNVALEPGDTSVYIFTEGVLAFP--VDKRTPLEAIGDGCALSLLSYKRVDRTFVEPAYEEVDY 167          
BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: D8LP55_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP55_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 2.640e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   26 SLEPGDTHVYIVTPEKIAFPFPVDKRTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDFGGNVGK 91
            +LEPGDT VYI T   +A+P  VDKRTPLEAI +GC LSLL F +VDR +VE AY EVD+   + K
Sbjct:  110 ALEPGDTSVYIFTEGVLAYP--VDKRTPLEAITNGCALSLLTFNKVDRAYVEPAYGEVDYAKMLAK 173          
BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: D7G322_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G322_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.970e-9
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    4 QQICARGKRXXXXXXXTSDSRA---SLEPGDTHVYIVTPEKIAFPFPVDKRTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDF 85
            Q +C R  R           R    +LEPGD++VYI T   +  P   DKRTPLEAI DGC LS++ +KRV+R  V+     VD+
Sbjct:   85 QMLCVRCHRQKTCLEAGGSPRTVEVALEPGDSNVYIFTGGTMDLP--CDKRTPLEAIGDGCALSIITYKRVNRKVVKVVDEGVDY 167          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNP5_ESV1K2.720e-1959.49EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP55_ECTSI2.640e-1660.61EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7G322_ECTSI2.970e-942.35EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:456890..472008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16294.1mRNA_C-linearis_contig87.16294.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 456638..472008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16294.1 ID=prot_C-linearis_contig87.16294.1|Name=mRNA_C-linearis_contig87.16294.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=91bp
MPPQQICARGKRGKRGKRGTSDSRASLEPGDTHVYIVTPEKIAFPFPVDK
RTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDFGGNVGK
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