prot_C-linearis_contig87.16282.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16282.1
Unique Nameprot_C-linearis_contig87.16282.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length100
Homology
BLAST of mRNA_C-linearis_contig87.16282.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.630e-22
Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MSMKQDFCDALIDACGDEISFGGPVEYGGLTYCEQHVGTSGTDSFWSYPYSDPLIVPGELTELFPDINGPVDFPDGTVSMRQSPDGSMYWIVGLEGQV 98
            ++MK +FC+ L+D C   I F     Y G +YC+ H G  G D FWSYPY +P I    L E+FPD+ G  + PD TVS+RQ+PDGS +W++G+ G++
Sbjct:  106 LTMKSEFCEELVDECAAYIEF---PTYDGTSYCDHHTG-GGNDFFWSYPYEEPEIFEPGLNEVFPDL-GDGEQPDDTVSVRQTPDGSQWWLLGIAGEI 198          
BLAST of mRNA_C-linearis_contig87.16282.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.690e-22
Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    1 MSMKQDFCDALIDACGDEISFGGPVEYGGLTYCEQHVGTSGTDSFWSYPYSDPLIVPGELTELFPDINGPVDFPDGTVSMRQSPDGSMYWIVGLEGQV 98
            M+MK DFC+ L+ ACG +I+F    +   + YC +H G  G D FWSYPY + +  P  L E+FPD+ G    PD TVSMRQ+PDGS +W++G+ GQ+
Sbjct:  109 MTMKSDFCNELLTACGGQINFP-TYDNNTVDYCTKHTG-GGDDFFWSYPYEEAISDPRFLNEVFPDL-GDNQQPDDTVSMRQTPDGSQWWLLGISGQI 203          
BLAST of mRNA_C-linearis_contig87.16282.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.690e-19
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    1 MSMKQDFCDALIDACGDEISFGGPVEYGGLTYCEQHVGTSGTDSFWSYPYSDPLIVPGELTELFPDINGPVDFPDGTVSMRQSPDGSMYWIVGLEGQV 98
            M+MK  FCD L+ AC  +I F    + G + YC +H G  G D FWSYPY + +      ++LFPD+ G  + PD TVSMRQ+PDGS +W++G+ GQ+
Sbjct:   32 MTMKSAFCDELVTACDGQIDFP-TYDSGTVDYCTKHTG-GGDDLFWSYPYEEAVTC-DLYSKLFPDL-GANEQPDDTVSMRQTPDGSQWWLLGISGQI 125          
BLAST of mRNA_C-linearis_contig87.16282.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.520e-16
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    1 MSMKQDFCDALIDACGDEISFGGPVEYGGLTYCEQHVGTSGTDSFWSYPYSDPLIVPGELTELFPDINGPVDFPDGTVSMRQSPDGSM 88
            ++MK +FC++L+DAC   I F     Y G++YC+ H G  G D FWSYPY +P I    L ELFPD+ G  + P  TVSMRQ    +M
Sbjct:   61 LTMKNEFCESLVDACAAYIDF---PTYDGVSYCDHHTG-GGADFFWSYPYEEPEIFEPGLNELFPDL-GDGEQPSDTVSMRQVDSDNM 143          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4P3_ECTSI2.630e-2245.92Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G961_ECTSI2.690e-2247.96Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G962_ECTSI1.690e-1945.92GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JZF5_9PHAE7.520e-1646.59GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:137089..139967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16282.1mRNA_C-linearis_contig87.16282.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 137089..139976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16282.1 ID=prot_C-linearis_contig87.16282.1|Name=mRNA_C-linearis_contig87.16282.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=100bp
MSMKQDFCDALIDACGDEISFGGPVEYGGLTYCEQHVGTSGTDSFWSYPY
SDPLIVPGELTELFPDINGPVDFPDGTVSMRQSPDGSMYWIVGLEGQVKG
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