prot_C-linearis_contig87.16268.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig87.16268.1
Unique Nameprot_C-linearis_contig87.16268.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length199
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 26..48
e-value: 0.019
score: 24.2
coord: 51..73
e-value: 4.7
score: 16.2
coord: 97..119
e-value: 24.0
score: 10.5
coord: 3..25
e-value: 270.0
score: 1.9
coord: 74..96
e-value: 130.0
score: 4.6
coord: 129..151
e-value: 410.0
score: 0.3
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 28..46
e-value: 0.0017
score: 17.9
coord: 54..72
e-value: 0.21
score: 11.5
coord: 102..117
e-value: 0.039
score: 13.8
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 27..55
score: 9.267
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 98..124
score: 8.462
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 52..81
score: 6.705
NoneNo IPR availableGENE3D1.20.5.190coord: 56..100
e-value: 1.5E-5
score: 26.5
coord: 2..55
e-value: 3.7E-7
score: 31.7
NoneNo IPR availableGENE3D1.20.5.190coord: 101..146
e-value: 4.8E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR22590UNCHARACTERIZEDcoord: 5..162
NoneNo IPR availablePANTHERPTHR22590:SF5coord: 5..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..43
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:41863..42995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16268.1mRNA_C-linearis_contig87.16268.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig87 41649..42995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig87.16268.1 ID=prot_C-linearis_contig87.16268.1|Name=mRNA_C-linearis_contig87.16268.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=199bp
MAAMRHAAVRVQVVVRGRKEFWLFRKKRAAAVSLQAWFRGIFARREVEMT
RRQRAVAILQAWARAAMARKGFLRKKKATVTLQVCWRGALAAVAARAREA
VVVRIQALYRGRVVRKQREKAEQRAWMAATHNAAVRVQAVVRGGKEFWLF
PKKRAAAVSLQAWFLDMAPENLGPLLTMMCRGVTNSDGETCFQRCFLTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR027417P-loop_NTPase