prot_C-linearis_contig86.16240.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16240.1
Unique Nameprot_C-linearis_contig86.16240.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length278
Homology
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.110e-90
Identity = 143/164 (87.20%), Postives = 150/164 (91.46%), Query Frame = 0
Query:  114 MRASGGEGEKGESTTNRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGPS 277
            M+ASG  G KGES  NR LGTVVYLLPMLDGL+ G DVFHAVP LG +VH VLAPALA+WDNVPFMPLVMFIILQVSV+RQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYV  EGEQF+TNFAFYCLVGAVAYAVAETARG+ ANQIPLISAAAEIQLGPS
Sbjct:    1 MKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 164          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.350e-90
Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0
Query:  110 TQLGMRASGGEGEKGESTTNRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGPS 277
            T L M+ASG  GEKGES  NR LGTVVYLLPMLDGL+ G DVFHAVP LG +VH VLAPALA+WDNVPFMPLVMFIILQVSV+RQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYV  EGEQF+TNFAFYCLVGAVAYAVAETARG+ ANQIPLISAAAEIQLGPS
Sbjct:  138 TLLSMKASGQGGEKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 305          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.980e-32
Identity = 63/147 (42.86%), Postives = 94/147 (63.95%), Query Frame = 0
Query:  130 RILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            R+L    Y+LP+LDG+  G +V+ AVPA+G  V+ VL PALA+W+ VPF+   +F+    + +  + SR +RF++QQAIL+DI  +VLGLL      V   G        FY L+ AVAY++    +G++ N+IP+IS AA+ Q+GP
Sbjct:   76 RLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGP 222          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT)

HSP 1 Score: 109 bits (273), Expect = 2.200e-25
Identity = 59/147 (40.14%), Postives = 90/147 (61.22%), Query Frame = 0
Query:  130 RILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            R+L T+ Y+LP +DG  +G  V+  VP +G +  A   P +A ++++PF  LV FI + +  +  + SRF+RFN+QQA+L+DI  +V GL G        E +   TNF FY  V  V YA+   A+G+  +Q+PL+S AA +Q+GP
Sbjct:   75 RVLATLPYVLPAIDGFAYGLYVYQNVPPIGAIAGAAF-PFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGP 220          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 4.130e-25
Identity = 57/148 (38.51%), Postives = 90/148 (60.81%), Query Frame = 0
Query:  129 NRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            +R+ GT+ Y+LP+LDG  +G  V+  VP  G V   V+AP +A++ ++PF  +V+FI L +  +    SR +RFN+QQA+L+DI  ++ GL       +  E +   TNF FY  V  V Y+    A+G   +Q+P++S AA +Q+GP
Sbjct:   45 DRVFGTLPYILPVLDGFGYGIYVYQNVPGAGEVA-GVIAPLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLPLELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQVPVLSEAAMMQIGP 191          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S4N5C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5C0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.070e-24
Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 0
Query:   94 LGRRSGGAGLAARKRGTQLGMRASGGEGE-KGESTTNRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMT--NFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            +G  +G +G   R  G  L M+  G EG+  G+   +RI   + YLLP+ DG  FG  +F   PAL  V    +AP     D+VPF+ L++F++L +  +  D +R +RFN QQAILVDI  +   L+G+    V        +  NF +Y +   V Y+V    RG+K +QIP IS AAE+ +GP
Sbjct:   63 VGNTAGASGKKNRHGGHLLTMKMWGDEGDIVGQ---DRIKSCIPYLLPLADGHHFGKYIFLNFPALRAVDEVTIAPLAHFLDSVPFLSLIVFLVLSLGTRNSDMARGVRFNAQQAILVDIALIFPELIGSGMDGVAMPTVLMASASNFVWYFMTACVGYSVVNNLRGKKPDQIPFISNAAEMAVGP 245          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S2CM34_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CM34_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 3.410e-24
Identity = 53/148 (35.81%), Postives = 89/148 (60.14%), Query Frame = 0
Query:  129 NRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            +R +   VY+LP+LDG  FG +++   P +G   + +L P +  + NVPF  L++FI L    +++  SR++RFN+QQA+L DI  ++  + G A      E +   +NF +Y +V  V Y+  + A+G+  + +P+IS AA IQ+GP
Sbjct:   35 DRAVSAAVYILPILDGFVFGSNIYATFPLVGSAAYKLL-PLVNTFQNVPFAGLILFIGLSTFTRKEGLSRYVRFNIQQALLTDIALIIPTVFGGAGRMFPLELQAMGSNFVWYAMVTIVCYSWVQIAQGKSPDGVPVISEAAAIQIGP 181          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: R1BZE0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BZE0_EMIHU)

HSP 1 Score: 104 bits (260), Expect = 3.450e-24
Identity = 59/148 (39.86%), Postives = 88/148 (59.46%), Query Frame = 0
Query:  130 RILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQD-TSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            R+  T+ Y+LP LDG ++G  VF+ VP   G   AVL P +  ++++PF  ++ FI L    +     SRF+RFN+QQA+++DIL ++  L   AAG V        +NF FY +   V YA+   ARG   +Q+P+IS AA +Q+GP
Sbjct:   10 RVFATLPYVLPFLDGFQYGLYVFNNVPGGVGFAEAVL-PLVVAFNSLPFSGIIFFIGLSFFTRPDSGLSRFVRFNIQQALVLDILLIIPSLFSGAAGMVPSSVAILGSNFVFYTMALVVTYALYSNARGELPDQVPVISEAAGLQIGP 156          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S2AKC4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKC4_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.210e-24
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 0
Query:  120 EGEKGESTTNRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMT---NFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            EG + E   +R+   + YLLPMLDGL++G+ VF  VP  G     +L P  A+ + +PF  L+ F+IL    + ++ +R +RF++QQAIL+DI  ++  L+G  A           T   NF FY L+  ++Y+V     G+  N IP IS AAE  +GP
Sbjct:  188 EGPEIEDIPDRVFACLPYLLPMLDGLQYGNGVFQMVPGAGATASVILGPFAAIRNAIPFGGLIFFLILSSLSRNENLNRGVRFSMQQAILIDIALILPSLVGGLASIGGEISPVITTPAENFVFYFLIATISYSVGSNLLGKVPNGIPFISEAAERSIGP 347          
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Match: A0A7S0JI91_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI91_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 2.220e-23
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 0
Query:  129 NRILGTVVYLLPMLDGLEFGHDVFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYAVAETARGRKANQIPLISAAAEIQLGP 276
            +R+ GT+ YLLP LDG  +G  ++  VP       AV AP +A++ ++PF  LV+FI L    +    SR +RFN+QQA+L+DI  ++ GL     G +  E +   TN  FY  +  V YA    A+G+  +Q+PL+S AA +Q+GP
Sbjct:   56 DRLFGTLPYLLPSLDGFGYGAYIYQNVPGAAQAAGAV-APFVALFQSLPFAGLVLFIGLSFFTRNAGLSRLVRFNIQQALLLDIALIIPGLFSPVTGLLPAELQIIGTNLVFYVCLFTVLYATWCNAQGKLPDQVPLLSEAALMQIGP 202          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C5_ECTSI1.110e-9087.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCJ5_9PHAE1.350e-9086.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUZ7_9STRA1.980e-3242.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4ES88_CHRCT2.200e-2540.14Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0PYH6_9EUKA4.130e-2538.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4N5C0_9STRA1.070e-2437.63Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2CM34_9EUKA3.410e-2435.81Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
R1BZE0_EMIHU3.450e-2439.86Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2AKC4_9STRA5.210e-2437.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0JI91_9EUKA2.220e-2339.19Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 130..270
e-value: 1.6E-12
score: 47.6
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 110..274
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 110..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..252
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 253..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.763
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 234..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:548134..551041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16240.1mRNA_C-linearis_contig86.16240.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 547955..552676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16240.1 ID=prot_C-linearis_contig86.16240.1|Name=mRNA_C-linearis_contig86.16240.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=278bp
MYIAKLRAAVAAAAVLLAQSVGAFMVGCAPAAVSSSARGVAAESTRHVNL
HASSIGSRDVDRSAFCSQQQPHFSSPLLSSRPRWTREGSIPGGLGRRSGG
AGLAARKRGTQLGMRASGGEGEKGESTTNRILGTVVYLLPMLDGLEFGHD
VFHAVPALGGVVHAVLAPALAVWDNVPFMPLVMFIILQVSVKRQDTSRFI
RFNVQQAILVDILTVVLGLLGTAAGYVTHEGEQFMTNFAFYCLVGAVAYA
VAETARGRKANQIPLISAAAEIQLGPS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20