prot_C-linearis_contig86.16227.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16227.1
Unique Nameprot_C-linearis_contig86.16227.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length971
Homology
BLAST of mRNA_C-linearis_contig86.16227.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 4.730e-99
Identity = 423/752 (56.25%), Postives = 449/752 (59.71%), Query Frame = 0
Query:    4 RSRGQANGGGHSKGNSDVAKYRDACPASRSDSELLEMVKKMGGDEAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXG---YGNXXXXXXXXRGMDDRRGGRGGLSEKMRGIRPDGDRGSYXXXXXXXXXXXXXXXXXXXRSAPPSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNGNRSSSIPPQTANSSVPASGGWGT--AAAKPPIAGGAWTGDGPTTAGEAADTAAEPSPAIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXED-----------------ATAWAQSNLPATSAWSRGAATIINPKXXXXXXXXXXXXXXXXATPAQP--------AAPXXXXXXXXXXXXXXXXXPQTPRPQGSMXXXXXXXXXX--SPAVGSPAVAV--------------------------------------SSPSLVARPVAASATAP-----VQPVQTASDTAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPENQAQQTSASVGTSAANGWGSSSASTMGGWGTKDTATSPVESQASGAKPPGFSSTVTVTASPSVPVGAGPPPGLPPLGNVKQQVHELEAEMDSLNKPHAQFSQQVSKSQSKLPAAQQPQVQ 680
            RS+  ANGGG  KGN+DVAKYRDACPASRSDSE++E+VKKMGGD+AKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXX    Y N        RGMDDRRGGRGG+++KMRG+R DGDRG Y   XXXXXXXXXX       SAPP+   XXXXXXXXXXXXXXXXXXXXXXXXXXXX                             A+AK P AG AWTGDGP    EA              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               XXX                   A AWAQSNLPATSAWSRGAATIINPK      XXX  XXXXX              A P                 PQTPRPQGSM            SPA+GS    V                                      ++PS V   V   ATAP     +Q  Q    +AV+                                             AA+GASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPE+Q+QQTS SVGTSA NGWG++S S MG WGTKDTATSPVE+   G KPPGFSS  TVTASPSVPVGAGPPPGLPPLGNVKQ VHELEAEMDSLNKPH+QFSQ VSK+QSKLPAAQQPQVQ
Sbjct:    3 RSQRHANGGG--KGNADVAKYRDACPASRSDSEIVELVKKMGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANG-------RGMDDRRGGRGGMADKMRGLRLDGDRGGYRGGXXXXXXXXXX-------SAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASAKAPAAGSAWTGDGPAAVSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKPVPVXXXVAXXXXXXXXXXXXXXXXXXAAHPTLPVVASPGGEAVAATPPQTPRPQGSMPSVAETAAAAAASPAIGSXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPSPVTAAVVTPATAPGSQLHLQKAQAQEASAVSKPT------------------------------------------AATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVGTSAGNGWGATSGSAMG-WGTKDTATSPVETP--GTKPPGFSS--TVTASPSVPVGAGPPPGLPPLGNVKQ-VHELEAEMDSLNKPHSQFSQ-VSKAQSKLPAAQQPQVQ 689          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT6_ECTSI4.730e-9956.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:414871..424518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16227.1mRNA_C-linearis_contig86.16227.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 414699..429008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16227.1 ID=prot_C-linearis_contig86.16227.1|Name=mRNA_C-linearis_contig86.16227.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=971bp
MSHRSRGQANGGGHSKGNSDVAKYRDACPASRSDSELLEMVKKMGGDEAK
IQSALEDWWQNDQGEWATATTKKKKQPASQHRGGGGGGYGNGPGGYANGR
GMDDRRGGRGGLSEKMRGIRPDGDRGSYHNDGGGGGYRGGGGGRGRGRSA
PPSGGRGGGGGRGGGGSRANWGGAPAPGGGSGEGAWNGNRSSSIPPQTAN
SSVPASGGWGTAAAKPPIAGGAWTGDGPTTAGEAADTAAEPSPAIPAASS
GGGWAAAVGGSAPTSSPGPSTTPVAAGGSSGWSGGGGGSGAASSQAPMAH
NGWSSSAQDPVAPASAGGGGSASLGGGGAAGGATPPKEEDATAWAQSNLP
ATSAWSRGAATIINPKPKPVPVPAAPSPAPVPATPAQPAAPPVASAASPG
GEAVAATPPQTPRPQGSMPPVAEATAAASPAVGSPAVAVSSPSLVARPVA
ASATAPVQPVQTASDTAVAAAAAAPSPVTAAAPAAGSQLHLQKTQQQQQQ
QQQQQEAAAAPKPTAASGASAPGEGLKMGKWGLSDTIANDESFLSFGQLS
FGVPDVGGPENQAQQTSASVGTSAANGWGSSSASTMGGWGTKDTATSPVE
SQASGAKPPGFSSTVTVTASPSVPVGAGPPPGLPPLGNVKQQVHELEAEM
DSLNKPHAQFSQQVSKSQSKLPAAQQPQVQEQQQQQQHVQQSQTTPRQQQ
QRSSSRDMPQQQQQQRQVQAPAPPQQAQQSPAPAQQATTASSSTQPPAPS
QQPPSSQQQQQQQPQQQQQVPSSSSSSSLSHQHGQQQQQQQQHVTPSPSP
SAPVPVQHQQHQQQHHQSQQPHGQPHQRPTRQQGGRGGYSSKPQYSSSTS
LPQQGGNNFYGGNTNTNTNSSGLSSSAKPAPGGVYSAPTPPSTHSGAGAG
AGSGSGSGHGSTSHGSPGTTATASKPLYGGQQAGSSSGAAGGAGGVSGSG
GPGGMGGMQGQQAPQQARSG*
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