prot_C-linearis_contig86.16201.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16201.1
Unique Nameprot_C-linearis_contig86.16201.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length156
Homology
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: D8LSE4_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE4_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 4.520e-94
Identity = 138/154 (89.61%), Postives = 147/154 (95.45%), Query Frame = 0 
Query:    1 MRPVLNMFFLLGSSVGFYANPMMRRVAVSSFAGSGLIRAVAATELPSQGQAKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLE 154
            MRPVLN+FFL GSSVGFYANPMMRRVAVSSFAGS ++RA +AT  PSQ QAKFTTSMN+VDFVEKEI+ NNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDG+AIQA+LGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL+
Sbjct:    1 MRPVLNLFFLFGSSVGFYANPMMRRVAVSSFAGSTIVRAASATAFPSQRQAKFTTSMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 154
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A835YTN8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.900e-34
Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0 
Query:   61 DFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            DFV+++I   ++VVFSKSYCP+C +TK LF  L   ATV ELDQ DDG  IQA L   TGQ TVPNVFVKGTHVGGNDA Q ANS G LK+L+
Sbjct:   66 DFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A7S1CWF6_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CWF6_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 2.090e-33
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:   50 QAKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLE 154
            +A   TS  T   V+  I+  +VVVFSKS+CPFC +TK LF  LGVDA +YELDQ DDG  IQA L   TGQ+TVPNVF+KG H+GGND  Q AN+SG L  +LE
Sbjct:   38 RAGLATSATTFS-VDDAIKAKDVVVFSKSFCPFCAKTKTLFRELGVDADIYELDQRDDGSEIQATLKEMTGQSTVPNVFIKGEHLGGNDDTQQANASGELAKMLE 141
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A1X2GSF3_9FUNG (Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF3_9FUNG)

HSP 1 Score: 120 bits (301), Expect = 1.760e-32
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:   63 VEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLE 154
            VE+ I  N +V+FSK+YCP+CT TK LF  LG DAT+ ELD  +DG AIQ  L  KTGQ TVPNVFVK  H+GGND VQAAN +G LK LLE
Sbjct:   16 VEELIANNKIVIFSKTYCPYCTSTKTLFKKLGQDATIIELDTRNDGSAIQNYLLTKTGQRTVPNVFVKQQHIGGNDNVQAANGNGTLKKLLE 107
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A7S3NI43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.890e-32
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0 
Query:   46 PSQGQAKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            P  GQA   +   +   ++  I+ N+VV+FSKSYCPFC +TK LF  L VDA +YELDQ DDG  IQ+ L  KTGQ+TVPNVF+KG H+GGND  Q A++SG L  LL
Sbjct:   26 PILGQAARRSMAASCLNIDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A168RTQ5_ABSGL (Glutaredoxin domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168RTQ5_ABSGL)

HSP 1 Score: 120 bits (300), Expect = 1.970e-32
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0 
Query:   63 VEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            V+  I+ N VV+FSKSYCP+C+ TKNLF  LGV+A V ELDQ+DDG AIQ  L  KTGQ TVPNVFV   HVGGN  VQAANS+G+L+ LL
Sbjct:    9 VDSLIKNNKVVIFSKSYCPYCSATKNLFKQLGVEAVVLELDQIDDGAAIQDYLQKKTGQRTVPNVFVAQQHVGGNSDVQAANSNGSLEKLL 99
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A7S2R353_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R353_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.790e-32
Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:   47 SQGQAKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLE 154
            SQ         +  DFV++EI  N+VVVFSKS+CPFC +TK+L  G+ +D T  EL+QMDDG  IQ  L   +GQ TVPNVFVKG H+GGND  Q A  SGALKT+LE
Sbjct:   51 SQDSQTVCQMSSASDFVKQEIANNDVVVFSKSFCPFCKKTKSLLDGMDIDYTALELNQMDDGADIQDALMDLSGQRTVPNVFVKGNHLGGNDDAQKAAKSGALKTMLE 158
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A1Z5KQE3_FISSO (Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQE3_FISSO)

HSP 1 Score: 120 bits (300), Expect = 8.080e-32
Identity = 59/108 (54.63%), Postives = 70/108 (64.81%), Query Frame = 0 
Query:   46 PSQGQAKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            PS          +  DF+  EI  N V +FSKSYCPFC++TK  FA LGVDA ++EL+QMDDG  IQ  L   TGQ TVPNVFV G H+GGND  Q A +SG +K LL
Sbjct:   39 PSSNYLTVRHMASKTDFITSEINSNQVTIFSKSYCPFCSKTKASFAELGVDAKIFELNQMDDGADIQDTLFEMTGQKTVPNVFVNGKHIGGNDDTQKAIASGEMKKLL 146
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A7S4JZY0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZY0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.610e-32
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:   35 GLIRAVAATELPSQGQAKFTTSMNTV--------DFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            G +    +  L S G A+ +T  +T+        +FV+ EI  N+V+VFSKSYCPFC +TKN+F  + VDA V ELD++D+GD IQA L   +GQ TVPNVF+KG H+GGND  + A  SG +K +L
Sbjct:   26 GTLSVARSAVLQSTGLARRSTQSSTLRMMSSSPEEFVKAEIASNDVMVFSKSYCPFCRKTKNIFKEMNVDAKVIELDEIDNGDQIQAALLEMSGQRTVPNVFIKGDHIGGNDDTKKAAKSGKIKEML 152
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BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Match: A0A1Z5KSJ8_FISSO (Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSJ8_FISSO)

HSP 1 Score: 117 bits (292), Expect = 3.220e-31
Identity = 57/95 (60.00%), Postives = 71/95 (74.74%), Query Frame = 0 
Query:   61 DFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLEK 155
            DF++KE + + VVV+SKSYCP+CT TKNLF  L V   V+ELDQM +G+ IQA L   TGQ TVPNVF+KG H+GGND  QAA+ SG L+ LL +
Sbjct:    6 DFIQKEHDASPVVVWSKSYCPYCTATKNLFQKLNVPHKVHELDQMSNGNDIQAALQQMTGQRTVPNVFIKGKHLGGNDDTQAAHRSGHLQQLLSQ 100
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE4_ECTSI4.520e-9489.61Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YTN8_9STRA4.900e-3465.59Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S1CWF6_9CHLO2.090e-3359.05Hypothetical protein n=1 Tax=Picochlorum oklahomen... [more]
A0A1X2GSF3_9FUNG1.760e-3264.13Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxI... [more]
A0A7S3NI43_9STRA1.890e-3255.56Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A168RTQ5_ABSGL1.970e-3265.93Glutaredoxin domain-containing protein n=1 Tax=Abs... [more]
A0A7S2R353_9STRA3.790e-3256.48Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5KQE3_FISSO8.080e-3254.63Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S4JZY0_9STRA9.610e-3248.03Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5KSJ8_FISSO3.220e-3160.00Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 117..130
score: 49.4
coord: 131..144
score: 31.25
coord: 72..90
score: 49.56
NoneNo IPR availableGENE3D3.40.30.10coord: 57..155
e-value: 4.8E-35
score: 121.7
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 61..154
NoneNo IPR availablePANTHERPTHR45694:SF5GLUTAREDOXIN 2coord: 61..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 38..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.533
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 72..134
e-value: 4.0E-18
score: 65.4
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 60..155
score: 22.175
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 72..152
e-value: 4.9E-29
score: 98.4
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 74..89
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 60..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:130321..133168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16201.1mRNA_C-linearis_contig86.16201.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 130321..134065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16201.1 ID=prot_C-linearis_contig86.16201.1|Name=mRNA_C-linearis_contig86.16201.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=156bp
MRPVLNMFFLLGSSVGFYANPMMRRVAVSSFAGSGLIRAVAATELPSQGQ
AKFTTSMNTVDFVEKEIEGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVY
ELDQMDDGDAIQAVLGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALK
TLLEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR011899Glutaredoxin_euk/vir
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf