prot_C-linearis_contig86.16190.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16190.1
Unique Nameprot_C-linearis_contig86.16190.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length653
Homology
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A6H5KSI2_9PHAE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI2_9PHAE)

HSP 1 Score: 1243 bits (3215), Expect = 0.000e+0
Identity = 624/652 (95.71%), Postives = 635/652 (97.39%), Query Frame = 0
Query:    1 MLRSGSRVARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            MLRS SR+  KL RATK  R+YHAT AAR+VVGGGAQ ASVNGGDITSKYQIIDHEYDAVVV AGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWR  WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPN DH+HLHLDHLPAELLAERLPGISETAQIFSGVDVT+DPIPVLPTVHYNMGGIPTNHLGEVIRPKK  DGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVA+APK+QTEKSLAALDKTRFA+G TPVA+LRLKLQKEMQDHAAVYRTQESLAEGV+RVDGVV DF DVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDY+TGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY
Sbjct:    1 MLRSSSRLGHKLVRATKGLRDYHATSAARVVVGGGAQEASVNGGDITSKYQIIDHEYDAVVVRAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNADHIHLHLDHLPAELLAERLPGISETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDGDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKAQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVKDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 650          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A835YUP3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP3_9STRA)

HSP 1 Score: 1018 bits (2633), Expect = 0.000e+0
Identity = 503/600 (83.83%), Postives = 548/600 (91.33%), Query Frame = 0
Query:   53 IDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            +DHEYDAVVVGAGGAGLRAAMG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMT DDWR  WHMYDTVKGSDWLGDQDAIHYMC+EAPRAVLELE YGLPFSRTE+GKIYQRAFGGQSL++GKGGQAYRCA AADRTGHAMLHTLYGRSLAF+T+YFIEYFA DLLM  DG CVGV A+CMEDGSIHRF AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+PL+DPEF+QFHPTGIYGAGCLITEG RGEGG+LRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVGPNKDH+HLHLDHLPAELLAERLPGISE A IFSGVDVT++PIPVLPTVHYNMGGIPTNH GEV++P+K A+G++ D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDKV  APK++T+++L ALD  R+A G T  AELRLKLQ+ MQD+AAVYRTQE+LA GV  VD VV +F DV VTDRSLIWNTDLIE MEL NLL NAACTMHAAEARKESRGAHAREDF DR D  WMKH++  FD   GKT ++YRPVH+FTLDE+E K+VPPFKRVY
Sbjct:   21 LDHEYDAVVVGAGGAGLRAAMGLAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTPDDWR--WHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEQYGLPFSRTEDGKIYQRAFGGQSLEFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFNTSYFIEYFAMDLLMADDGSCVGVTAMCMEDGSIHRFKAKNTVLATGGYGRAYFSCTSAHTCTGDGSAMALRAGLPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGMLRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPNKDHIHLHLDHLPAELLAERLPGISELAAIFSGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVKPRKNANGDI-DQDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKVQDAPKAETDRALGALDDMRYARGQTSTAELRLKLQRVMQDNAAVYRTQETLAHGVVSVDAVVKEFGDVGVTDRSLIWNTDLIETMELRNLLGNAACTMHAAEARKESRGAHAREDFKDRDDVNWMKHTLATFDESKGKTHLDYRPVHAFTLDEKECKVVPPFKRVY 617          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A7S3ZYC3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7S3ZYC3_9STRA)

HSP 1 Score: 1005 bits (2598), Expect = 0.000e+0
Identity = 493/607 (81.22%), Postives = 541/607 (89.13%), Query Frame = 0
Query:   46 ITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            +   Y I+DH YD VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTEDDWR  WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTE+GKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYF+E+FA DL+M  +G+CVGV+ + ME+G+IHR +AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEF+QFHPTGIYGAGCLITEGCRGEGGILRNS+GERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVG  KDH +LHLDHLPAELLAERLPGISETA IF+GVDVT++PIPVLPTVHYNMGGIPTNHLGEVI  KK A GNV DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGD V   P+   +K+L  LD  R + G TP AE+R  +QK MQDHAAVYRTQESLAEGV+++D VV+ F+DV V+DRSLIWNTDL+E +EL NLL NAA TMHAAEARKESRGAHARED PDRLDD WMKH+MTY+D  T KT V YRP+H  TLDE+E  +VPP  RVY
Sbjct:   49 LVGDYTIVDHSYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEDGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFLEFFALDLIMDDEGKCVGVVCLEMENGTIHRINAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSDGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTREPIPVLPTVHYNMGGIPTNHLGEVIHQKKDASGNVVDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDAVPPLPRDAGQKTLQDLDDVRHSSGPTPTAEIRRDMQKTMQDHAAVYRTQESLAEGVTKIDKVVDSFQDVGVSDRSLIWNTDLVETLELRNLLPNAAATMHAAEARKESRGAHAREDCPDRLDDDWMKHTMTYYDEATRKTSVTYRPIHYETLDEDECAVVPPVARVY 653          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: W7TSA7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSA7_9STRA)

HSP 1 Score: 983 bits (2540), Expect = 0.000e+0
Identity = 497/653 (76.11%), Postives = 557/653 (85.30%), Query Frame = 0
Query:    1 MLRS-GSRVARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            MLRS G R+   +A+  +  R  HA+ A    + G      V+     +KY +IDHEYD VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTEDDWR  WHMYDTVKGSDWLGDQDAIHYMCREAPRAV ELESYGLPFSRTE+GKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+TTYFIEYFA DL+M  DG CVG+ A+ MEDG++HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AM +RAG+P+EDPEF+QFHPTGIYGAGCLITEGCRGEGGILRN+EGERFMERYAP+AKDLASRDVVSR+MT+EI+EGRGVG  KDHL LHLDHLP +LLAERLPGISETA IF+GVDVT++PIPVLPTVHYNMGGIPTNH GEVI PKK ADG++ D D ++PGLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPGDKV   P    ++S+  LDK RFA G T  A +R K+QK MQ+HAAVYRTQ+SLAEG  ++D V++ ++D+KVTDRSL+WNTDLIE++EL NLLSNAA TM+AAEARKESRGAHAREDF +R D  WM H++  FDY+T KT + YRPVH  TLDE EVK VPPFKRVY
Sbjct:    1 MLRSVGKRLLGSVAQVQR--RAIHASSARLAAISGVPPEGKVSSTP-NAKYTVIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSL-DPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 647          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A6U4KQK6_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KQK6_9STRA)

HSP 1 Score: 977 bits (2526), Expect = 0.000e+0
Identity = 478/608 (78.62%), Postives = 537/608 (88.32%), Query Frame = 0
Query:   45 DITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            D+TSKY I+DHE+DAVVVGAGGAGLRAAMG +E G KTAC+TKLFPTRSHTVAAQGGINAALGNMTEDDWR  WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSL++GKGGQAYRCACAADRTGHAMLHTLYGRSLAFDT YFIEYFA DL+M  DG+CVG++A+ MEDG++HRF+AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAGIP +DPEF+QFHPTGIYGAGCL+TEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVGP  DH++LHLDHLPA+LLAERLPGISETA IF+GVDVT++PIPVLPTVHYNMGG+PTNH GEV++P K       + DA+VPGLFAAGE A ASVHGANRLGANSLLDIVVFGRACA RIA+I+KPG+ V   P    EK++  LDK RFA+G  P A++RL +Q  MQ+HAAVYRT + L EGV ++D VV  FKDVKV+D SL+WNTDLIE  EL NLL NAA T+H+AEARKESRGAHA E+FPDR D+ WMKH+++Y D ++GKT V+YRPVH FTLDE E K VPP  RVY
Sbjct:   38 DVTSKYTIVDHEFDAVVVGAGGAGLRAAMGLSEHGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLEFGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTAYFIEYFALDLIMDGDGKCVGIMAINMEDGTLHRFNAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGIPNQDPEFVQFHPTGIYGAGCLMTEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPKSDHIYLHLDHLPADLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGVPTNHFGEVLKPTK------DEPDAVVPGLFAAGEVASASVHGANRLGANSLLDIVVFGRACANRIADIAKPGEAVPPLPTKAGEKTIDDLDKVRFADGAIPTADIRLDMQMTMQEHAAVYRTADVLKEGVVKMDEVVKKFKDVKVSDHSLVWNTDLIETWELRNLLPNAATTVHSAEARKESRGAHAHENFPDRDDENWMKHTLSYHDEDSGKTTVDYRPVHYFTLDEAECKTVPPVARVY 637          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A7S2Y3D2_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3D2_9STRA)

HSP 1 Score: 969 bits (2505), Expect = 0.000e+0
Identity = 480/605 (79.34%), Postives = 535/605 (88.43%), Query Frame = 0
Query:   50 YQIIDH-EYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVN-DFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            Y+I+DH E+DAVVVGAGGAGLRAAMG AEAG  TAC+TKLFPTRSHTVAAQGGINAALGNMT+DDWR  WHMYDTVKGSDWLGDQDAIHYMC+EAP AVLELESYGLPFSRTEEGKIYQRAFGGQSL+YGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFA DL+M+ +G+CVG+ A+CMEDGSIHRF   NTVLATGG GRA+FSCTSAHTCTGDGGAMA RAG+PLED EF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVG NKDH+ LHLDHLP +LLAERLPGISETA IF+GVDVT+DPIPVLPTVHYNMGGIPTNHLGEVI PKK A+G V D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDK    P    ++S+A +DK R+A G T  A+LRL+LQK MQ HAAVYRT + L +G+  VD +      DV+  D+ L+WNT+LIE +EL NL++NA+  + +AE RKESRGAHAREDFPDR D+ WMKH++ YFD  TGK+K+EYRPVHSFTLDE+E K VPP +RVY
Sbjct:   43 YKIVDHTEFDAVVVGAGGAGLRAAMGLAEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMTKDDWR--WHMYDTVKGSDWLGDQDAIHYMCKEAPHAVLELESYGLPFSRTEEGKIYQRAFGGQSLEYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFALDLMMS-EGQCVGITAMCMEDGSIHRFHTNNTVLATGGAGRAYFSCTSAHTCTGDGGAMATRAGLPLEDQEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTVEIQEGRGVGKNKDHIFLHLDHLPPDLLAERLPGISETASIFAGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVINPKKAANGEVEDWDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKKPPLPGDAGDQSIADVDKFRYANGSTSTADLRLELQKSMQTHAAVYRTPDLLKKGLDEVDAIAKRSVDDVRNDDKGLVWNTNLIETLELRNLVANASTVITSAENRKESRGAHAREDFPDRDDEHWMKHTLAYFDEATGKSKLEYRPVHSFTLDEDECKTVPPVQRVY 644          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A7S2RM10_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM10_9STRA)

HSP 1 Score: 968 bits (2503), Expect = 0.000e+0
Identity = 482/630 (76.51%), Postives = 538/630 (85.40%), Query Frame = 0
Query:   27 AARMVVGGGAQNASVNGG----DITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            A+  ++G G   A+V  G      +  Y ++DH++D VVVGAGGAGLRAAMG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMTEDDWR  WHMYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+G+PFSRTEEGKIYQRAFGGQSLD+GKGGQAYRCA AADRTGHAMLHTLYGRSLAFDTTY IEYFA DL+M  +G CVGV+A+CMEDGS+HR +A NT+LATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVG N DH+ LHLDHLPA+LLAERLPGISETA IF+ VDVT++PIPVLPTVHYNMGG+PTNH GEVIR KK ADG   DHD+IVPGLFAAGE ACASVHGANRLGANSLLDIVVFGRACA RIAEI+KPG  V   PK   + S+A LDK R+A+G  P A LRL++Q+ MQ++AAVYRT E L+EG  ++D VV+ F+ V  +DRSLIWNTDLIE +EL NLL NA+ TMHAA  R ESRGAHARED PDR D+ WMKH+M YFD  TG++ VEYRPVH  TLDE E K VPP  RVY
Sbjct:   14 ASSTLLGRGLSRAAVQRGLSIPAASKSYDVVDHQFDVVVVGAGGAGLRAAMGAAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPKAVLELESFGMPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDEGRCVGVLAMCMEDGSLHRINASNTILATGGYGRAYFSCTSAHTCTGDGNAMAMRAGLANEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKNNDHIFLHLDHLPADLLAERLPGISETANIFAAVDVTKEPIPVLPTVHYNMGGVPTNHFGEVIRVKKNADGT-EDHDSIVPGLFAAGEVACASVHGANRLGANSLLDIVVFGRACANRIAEIAKPGAPVPPLPKDAGDASIADLDKLRYAKGDVPTASLRLEMQQVMQENAAVYRTAEVLSEGCEKIDAVVDKFQHVGTSDRSLIWNTDLIETLELRNLLGNASTTMHAASQRTESRGAHAREDTPDRDDENWMKHTMAYFDESTGRSTVEYRPVHYHTLDEGECKTVPPVARVY 640          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: F0YDU4_AURAN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU4_AURAN)

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 474/603 (78.61%), Postives = 524/603 (86.90%), Query Frame = 0
Query:   50 YQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            Y ++DH YD  VVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNM+EDDW+  WHMYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+GLPFSRT++GKIYQRAFGGQSLDYGKGGQAYRC  AADRTGHAMLHTLYGRSLAFDTTYF+EYFA DL+M  +G CVG++A+ MEDG++HR +A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVG + DH +LHLDHLPAELLAERLPGISETA IF+GVDVT++PIPVLPTVHYNMGGIPTNHLGEVIR   G DG+V DHD +VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG  V   P    EK++A +D  RF+ G  P A++R  +QK MQDHAAVYRT ESLAEG  ++   V  F D+ VTDRSLIWNTDLIE +EL NLL NAA TM AAEARKESRGAHARED PDRLDD WMKH+M YFD  T KT V YRP+H  TLD +E  +VPP  RVY
Sbjct:   29 YTVVDHSYDVCVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWK--WHMYDTVKGSDWLGDQDAIHYMCREAPQAVLELESFGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCCAAADRTGHAMLHTLYGRSLAFDTTYFLEYFALDLIMDDEGSCVGIVAINMEDGTLHRINASNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKDADHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRQVTGPDGSVIDHDEVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAEPGAPVPPLPADAAEKTIADVDAIRFSSGPRPTADVRKDMQKTMQDHAAVYRTAESLAEGCEKIQKNVEAFADIGVTDRSLIWNTDLIETIELRNLLPNAATTMFAAEARKESRGAHAREDTPDRLDDEWMKHTMCYFDEATNKTTVTYRPIHYETLDADECPVVPPVARVY 629          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: B8CCT7_THAPS (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCT7_THAPS)

HSP 1 Score: 961 bits (2485), Expect = 0.000e+0
Identity = 475/606 (78.38%), Postives = 526/606 (86.80%), Query Frame = 0
Query:   47 TSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            T  Y I+DH YDA+V+GAGG+GLRAAMG +EAG KTAC++KLFPTRSHTVAAQGGINAALGNM  DDWR  WHMYDTVKGSDWLGDQDAIHYMCREAP+AVLELE +GLPFSRTEEGKIYQRAFGGQSLD+GKGGQA+RC  AADRTGHAMLHTLYGRSLAFDTTYFIEYFA DLLMTPDG+CVG +A+ MEDG++HR  AKNTVLATGGYGR +FSCTSAHTCTGDG AMA+RAG+  +D EF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSR+MT+EI+EGRGVGP KDH +LHLDHLPAELLAERLPGISETA IF+GVDVT++PIPVLPTVHYNMGGIPTNHLGEVIR    ADG+    D +VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACA RIAEI+KPGD +A AP      S+A LDK RFA G TP + +R ++Q  MQD AAVYRT+E LAEG   +D VV  F DV VTD+SLIWNTDL+E +EL NLL  AA TMH+AE RKESRGAHA E++PDRLDD WMKH++ YFD + GKTK+ YRP+H +TLDEEE K VPP  RVY
Sbjct:   35 TGDYTIVDHTYDALVIGAGGSGLRAAMGLSEAGFKTACVSKLFPTRSHTVAAQGGINAALGNMGPDDWR--WHMYDTVKGSDWLGDQDAIHYMCREAPKAVLELEEFGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAHRCCAAADRTGHAMLHTLYGRSLAFDTTYFIEYFAMDLLMTPDGQCVGAMALNMEDGTLHRIKAKNTVLATGGYGRTYFSCTSAHTCTGDGNAMAMRAGLANQDAEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPKKDHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRTDFNADGSFNS-DVVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACANRIAEIAKPGDAIADAPADVGMDSVAELDKLRFATGSTPTSVIRGEMQHLMQDKAAVYRTEELLAEGKKEIDEVVQSFNDVHVTDKSLIWNTDLVETLELRNLLGCAATTMHSAENRKESRGAHAHENYPDRLDDEWMKHTLAYFDEKEGKTKIGYRPIHYYTLDEEECKTVPPVARVY 637          
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Match: A0A7S3JSD7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSD7_9STRA)

HSP 1 Score: 959 bits (2480), Expect = 0.000e+0
Identity = 473/604 (78.31%), Postives = 528/604 (87.42%), Query Frame = 0
Query:   50 YQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPVLPTVHYNMGGIPTNHLGEVIRP-KKGADGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAALDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVNDFKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 652
            Y+IIDH++D  VVGAGGAGLRAAMG AEAG KT C+TKLFPTRSHTVAAQGGINAALGNMT+DDWR  WH YDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTTY IEYFA DL+M  DG CVGV+A+CMEDGS+HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  +DPEF+QFHPTGIYGAGCLITEGCRGEGGILRN++GERFMERYAPSAKDLASRDVVSR+MT+EI++GRGVG +KDH+ LHLDHLP ELLAERLPGISETAQIF+GVDVT++PIPVLPTVHYNMGGIPTN+ GEVIR  K  A G + DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG +    PK+  EKS+A L++ RFA+G TP A +R  +QK MQDHAAVYRTQESLA+G  ++D V   F DV + DRSLIWNTDL+E +EL NLL NAA T+HAAE RKESRGAHAREDF  R D  WMKH++ Y D E+ + +V+YRP+H +TLDE E   VPP  RVY
Sbjct:   32 YKIIDHDFDVCVVGAGGAGLRAAMGSAEAGFKTVCVTKLFPTRSHTVAAQGGINAALGNMTKDDWR--WHSYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDDGACVGVLALCMEDGSLHRIHAANTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAQDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAQGERFMERYAPSAKDLASRDVVSRAMTLEIQQGRGVGKDKDHIFLHLDHLPPELLAERLPGISETAQIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVIRQIKDEATGEIIDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAQIAQPGGQKKPLPKNAGEKSIADLNQIRFAQGPTPTAHIRHSMQKVMQDHAAVYRTQESLAQGAQKIDQVCAAFADVGIKDRSLIWNTDLVETLELRNLLPNAATTVHAAEKRKESRGAHAREDFTTRDDQNWMKHTVCYVDPESFQVQVDYRPIHYYTLDENEFATVPPVARVY 633          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI2_9PHAE0.000e+095.71Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A835YUP3_9STRA0.000e+083.83Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S3ZYC3_9STRA0.000e+081.22Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
W7TSA7_9STRA0.000e+076.11Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A6U4KQK6_9STRA0.000e+078.62Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S2Y3D2_9STRA0.000e+079.34Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S2RM10_9STRA0.000e+076.51Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
F0YDU4_AURAN0.000e+078.61Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
B8CCT7_THAPS0.000e+078.38Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S3JSD7_9STRA0.000e+078.31Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 570..590
NoneNo IPR availablePIRSFPIRSF000171SDHA_APRA_LASPOcoord: 47..641
e-value: 2.2E-43
score: 146.2
NoneNo IPR availableGENE3D1.20.58.100coord: 488..602
e-value: 2.0E-39
score: 136.4
NoneNo IPR availableGENE3D4.10.80.40coord: 603..652
e-value: 2.6E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR11632:SF51SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIALcoord: 45..652
NoneNo IPR availablePANTHERPTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITcoord: 45..652
IPR027477Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilyGENE3D3.90.700.10coord: 298..401
e-value: 7.1E-167
score: 557.1
IPR027477Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilySUPERFAMILY56425Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domaincoord: 288..406
IPR003953FAD-dependent oxidoreductase 2, FAD binding domainPFAMPF00890FAD_binding_2coord: 58..462
e-value: 8.6E-120
score: 400.6
IPR014006Succinate dehydrogenase/fumarate reductase, flavoprotein subunitTIGRFAMTIGR01812TIGR01812coord: 58..638
e-value: 7.8E-232
score: 768.7
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 58..473
e-value: 7.1E-167
score: 557.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 49..490
IPR011281Succinate dehydrogenase, flavoprotein subunitTIGRFAMTIGR01816TIGR01816coord: 55..652
e-value: 6.6E-289
score: 957.0
IPR015939Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalPFAMPF02910Succ_DH_flav_Ccoord: 517..652
e-value: 8.1E-42
score: 142.2
IPR003952Fumarate reductase/succinate dehydrogenase, FAD-binding sitePROSITEPS00504FRD_SDH_FAD_BINDINGcoord: 92..101
IPR037099Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamilySUPERFAMILY46977Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domaincoord: 508..652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:70490..82503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16190.1mRNA_C-linearis_contig86.16190.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 69554..82683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16190.1 ID=prot_C-linearis_contig86.16190.1|Name=mRNA_C-linearis_contig86.16190.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=653bp
MLRSGSRVARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKY
QIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQG
GINAALGNMTEDDWRYVWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLEL
ESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHT
LYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNT
VLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYG
AGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIK
EGRGVGPNKDHLHLHLDHLPAELLAERLPGISETAQIFSGVDVTQDPIPV
LPTVHYNMGGIPTNHLGEVIRPKKGADGNVTDHDAIVPGLFAAGEAACAS
VHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAKAPKSQTEKSLAA
LDKTRFAEGGTPVAELRLKLQKEMQDHAAVYRTQESLAEGVSRVDGVVND
FKDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHARE
DFPDRLDDTWMKHSMTYFDYETGKTKVEYRPVHSFTLDEEEVKMVPPFKR
VY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027477Succ_DH/fumarate_Rdtase_cat_sf
IPR003953FAD-binding_2
IPR014006Succ_Dhase_FrdA_Gneg
IPR036188FAD/NAD-bd_sf
IPR011281Succ_DH_flav_su_fwd
IPR015939Fum_Rdtase/Succ_DH_flav-like_C
IPR003952FRD_SDH_FAD_BS
IPR037099Fum_R/Succ_DH_flav-like_C_sf