prot_C-linearis_contig85.16179.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16179.1
Unique Nameprot_C-linearis_contig85.16179.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length196
Homology
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.030e-53
Identity = 102/200 (51.00%), Postives = 136/200 (68.00%), Query Frame = 0
Query:    6 YVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQ---SRDAKL------QNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            +V T  A   LGV   TLRKWD+   I  IR  GG R+++I  F++ Q   S +A+L      ++KK   R    Y RVS +KQ EDL RQ + +  S PG  + SD GSG+NFKRKGFK+LLR +M G +  V+V+Y+DRLCR AF+++++ICDE+ T+L+V NQ++ GS E EL+EDLMA+VHVFSSRLYGKRS   R
Sbjct:    3 FVNTKTAIERLGVSNVTLRKWDKLEAIPTIRTPGGQRVYDIETFQKTQALRSEEARLCARRMAKDKKNASRIDIGYARVSFSKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKLLRCIMQGQIDRVLVAYKDRLCRFAFEIIQFICDENNTELVVLNQNENGSAEAELMEDLMAVVHVFSSRLYGKRSTGKR 202          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A846H8F0_9CYAN (IS607 family transposase n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H8F0_9CYAN)

HSP 1 Score: 160 bits (404), Expect = 3.400e-46
Identity = 82/193 (42.49%), Postives = 120/193 (62.18%), Query Frame = 0
Query:    3 SDEYVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKS 195
            SD+YV+ ++A+R LGV+  TLR+W++   I  IR  GG R ++I+ F     R               IY RVSS KQ EDL+RQ + LE+ YP  ++ ++ G G+N+KRK F  LL  VM G +  +V++Y+DRL R  FD   W+C  +  +++V NQ  E S E+E++ED++AI+H FS+RLYG R  KS
Sbjct:    2 SDKYVSPADAARTLGVNERTLRRWEKEEKITAIRTVGGQRRYDITAFTTKPVRCT------------VIYARVSSPKQREDLQRQCDYLESKYPNSEIIAEIGGGLNYKRKKFLALLERVMQGDIERIVIAYKDRLARFGFDFFAWLCSLNSCEIVVLNQ-VELSPEREMVEDILAILHCFSARLYGLRKYKS 181          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: K9TLX0_9CYAN (Putative site-specific integrase-resolvase n=36 Tax=Oscillatoriales TaxID=1150 RepID=K9TLX0_9CYAN)

HSP 1 Score: 157 bits (398), Expect = 2.160e-45
Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 0
Query:    6 YVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            YV    A++ILGVH  TLR+WD   +IE IR   G R +N+  +      D         KR   IY RVSS  Q  DL RQ+  L   YP  +V S+ G G+NFKRK    LL +V+ G +  VVV+++DRL R  FDL  W+C++++ +LLV N+    S E+E++ED++AI+H FSSRLYG R  K++
Sbjct:    4 YVKPKEAAQILGVHERTLRRWDENGSIETIRTPAGQRRYNVESYTAFSGSD---------KRKVVIYARVSSRAQQSDLNRQVAALSNLYPEAEVVSEIGGGLNFKRKKMLALLGQVLSGDVRMVVVAHKDRLARFGFDLFRWLCEQNRCELLVLNETS-LSPEREMVEDILAILHCFSSRLYGLRKYKTQ 184          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A6H1TYQ4_9CYAN (IS607 family transposase n=5 Tax=Oxynema aestuarii AP17 TaxID=2064643 RepID=A0A6H1TYQ4_9CYAN)

HSP 1 Score: 157 bits (396), Expect = 3.510e-45
Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    5 EYVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            +YVT   A  ILGV   TLR WD+   I  IR+  G+R ++IS        D K      K R   IY RVSS KQ  DL RQ + L   YP  +V  + GSG+N+ RK FK +L  VM G +  +VV ++DRL R  F+LL+WIC+ + T+L+V N   E S E+E++ED++AIVHVFS RLYG R  KS+
Sbjct:    4 KYVTPKEAQAILGVSEKTLRNWDKQGKIRAIRIPSGHRRYDISSI------DGK------KNRARIIYARVSSHKQKADLDRQADYLLCLYPRAEVIKEIGSGLNYNRKKFKAILERVMSGDVEQLVVGHKDRLARFGFELLKWICELNHTELVVCNN-TELSPEREMVEDILAIVHVFSYRLYGLRKYKSQ 182          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: UPI000BBC73EB (IS607 family transposase n=1 Tax=unclassified Calothrix TaxID=2619626 RepID=UPI000BBC73EB)

HSP 1 Score: 152 bits (384), Expect = 3.070e-43
Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 0
Query:    6 YVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            YVT   A +IL V   TLR WD++  I  IR    +R ++I         D+ L  K  KKRT  +YCRVSS KQ +DL RQ + L++ +PG  V  + GSG+N+ R G + LL +++ G +  VV SY+DRL R   +++++IC E+ TKL+V N+  + S E+E +ED++AI+HVFSS+LYG R  K +
Sbjct:    4 YVTPREAMQILQVSEKTLRDWDKSGKIRAIRTPSNHRRYDI---------DSVLDPKALKKRTTYLYCRVSSHKQRDDLNRQADYLQSLFPGGCVIKEIGSGLNYNRIGLQTLLGQILSGDVEQVVCSYKDRLARFGIEIIDYICRENDTKLVVLNR-IDLSPEREFVEDILAIIHVFSSKLYGLRKYKQK 184          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A6L9ZT93_9CYAN (IS607 family transposase n=1 Tax=Okeania sp. SIO3B5 TaxID=2607811 RepID=A0A6L9ZT93_9CYAN)

HSP 1 Score: 152 bits (383), Expect = 5.330e-43
Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    6 YVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            YVT   A+RILGV   TLR W+    I+ IR  GG R ++I+ +    +            R   +Y RVSS KQ EDL RQ E L++ YP  ++  + G G+N+KRK    +L  VM G++ ++VV+Y+DRL R  FDLLEW C  H  +++V N+  E S E+E++ED+++I+H FS+RLYG R   S+
Sbjct:    5 YVTPGEAARILGVCDRTLRYWEEQGKIKTIRTAGGQRRYDITTYTTGTTGH----------RVIILYARVSSTKQKEDLERQCEYLKSQYPDGELVKEVGGGLNYKRKKMLAILERVMSGNVQSIVVTYKDRLLRFGFDLLEWFCAHHNVQIVVLNK-VELSPEREMVEDILSILHGFSARLYGLRKYSSQ 184          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A7S6RG97_9CYAN (IS607 family transposase n=4 Tax=Nostocales TaxID=1161 RepID=A0A7S6RG97_9CYAN)

HSP 1 Score: 150 bits (380), Expect = 1.800e-42
Identity = 76/191 (39.79%), Postives = 123/191 (64.40%), Query Frame = 0
Query:    5 EYVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKS 195
            ++VT   A++ILGVH ++LR+W+    ++ IR  GG R F + + ++      K++           Y RVS+  Q +DL+RQ+E+L T YP  ++ S+ GSG+NFKRK F  +L  ++ G +  VVV++ DRL R  F+L+ W+C + + +L+V N D++ S E+EL++D+++I+H FSSRLYG R  KS
Sbjct:    2 QHVTPKEAAKILGVHVSSLRRWENEGKLKAIRTPGGQRRFILEEVEKIGGIPRKIKT--------ICYGRVSTHSQQDDLQRQLEHLRTRYPEAEIISEVGSGLNFKRKKFLAILERIIDGDIQRVVVAHPDRLVRFGFELVRWLCTKFECELVVLN-DRKLSPEQELVQDMLSIIHCFSSRLYGLRKYKS 183          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A662S372_9ARCH (IS607 family transposase n=1 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A662S372_9ARCH)

HSP 1 Score: 149 bits (376), Expect = 3.900e-42
Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 0
Query:    9 TSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            TS AS+ LG+HPNTLR+W     I  +R   G+RL+++  F         L   K+  R   IY RVSS +Q +DL  QI+ L   YP  +   D GSG+NFKRKGF +LL +V+ G +  +VV+++DRLCR  FD  + I +    KL+V ++  + S ++EL++DL++I+HVFS R+YG R   S+
Sbjct:    4 TSVASKKLGIHPNTLRRWANEGRINYVRQPQGHRLYDVDSF---------LNQGKKIDRVKFIYARVSSRRQADDLSNQIKYLRERYPTHEFLQDYGSGLNFKRKGFCKLLEQVLSGAVSEIVVTHKDRLCRFGFDFFQKIAEHFDCKLVVLDE-VKLSPQEELIQDLISIIHVFSCRIYGLRKYPSK 181          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A6P0SSH2_9CYAN (IS607 family transposase n=5 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SSH2_9CYAN)

HSP 1 Score: 149 bits (377), Expect = 4.040e-42
Identity = 78/194 (40.21%), Postives = 119/194 (61.34%), Query Frame = 0
Query:    3 SDEYVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR 196
            S  YV    AS  LGV   TL +W  +  I+ I+  GG R ++++     +S   +        R+  +Y RVSS  Q  DL +Q++ L++ YP  ++  D GSG+NFKRKG + LL  V+ G    VVV+++DRLCR  FDL+ W+C + QTK+LV ++ +  S E+E++ED++A++HVFS RLYG R  K++
Sbjct:    4 SVNYVPPRVASNRLGVSTKTLERWLESGKIQGIKTPGGQRRYDLNSVVSIRSEKIRTD------RSTILYARVSSRSQKNDLEQQVQFLQSRYPDAEIIKDIGSGLNFKRKGLQALLDRVIGGSCKYVVVAHKDRLCRFGFDLISWLCSKFQTKILVLDE-KNLSPEQEMVEDVLAVIHVFSCRLYGLRKYKNK 190          
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Match: A0A2T1E235_9CYAN (IS607 family transposase n=1 Tax=filamentous cyanobacterium Phorm 46 TaxID=2107705 RepID=A0A2T1E235_9CYAN)

HSP 1 Score: 149 bits (377), Expect = 4.040e-42
Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    6 YVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFKRDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQVFSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWICDEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKS 195
            YVT   A +IL V   TLR W+  + I  IR     R ++I         D+ L    +  R  AIY RVSS KQ EDL RQ+  L+  YP  +VF D G G+NFKRK    LL +VM G + T+VV ++DRL R   DL++WIC+++  +LLV ++  E S E+E++ED++AI+HVFS RLYG R  KS
Sbjct:    4 YVTPREACKILQVSEKTLRNWELADKISAIRTPTNQRRYDI---------DSVLGTGHD--RVTAIYARVSSHKQREDLDRQVSYLQNLYPQAKVFKDIGGGLNFKRKALLSLLGQVMSGDISTIVVGHQDRLARFGGDLIKWICEQNDCQLLVLSR-SELSPEREMVEDILAIIHVFSCRLYGLRKYKS 181          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4M4_9PHAE2.030e-5351.00Resolvase/invertase-type recombinase catalytic dom... [more]
A0A846H8F0_9CYAN3.400e-4642.49IS607 family transposase n=1 Tax=Hassallia byssoid... [more]
K9TLX0_9CYAN2.160e-4543.46Putative site-specific integrase-resolvase n=36 Ta... [more]
A0A6H1TYQ4_9CYAN3.510e-4545.83IS607 family transposase n=5 Tax=Oxynema aestuarii... [more]
UPI000BBC73EB3.070e-4342.93IS607 family transposase n=1 Tax=unclassified Calo... [more]
A0A6L9ZT93_9CYAN5.330e-4341.88IS607 family transposase n=1 Tax=Okeania sp. SIO3B... [more]
A0A7S6RG97_9CYAN1.800e-4239.79IS607 family transposase n=4 Tax=Nostocales TaxID=... [more]
A0A662S372_9ARCH3.900e-4242.02IS607 family transposase n=1 Tax=Candidatus Korarc... [more]
A0A6P0SSH2_9CYAN4.040e-4240.21IS607 family transposase n=5 Tax=unclassified Moor... [more]
A0A2T1E235_9CYAN4.040e-4244.74IS607 family transposase n=1 Tax=filamentous cyano... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006119Resolvase, N-terminal catalytic domainSMARTSM00857resolvase_6coord: 69..191
e-value: 3.0E-14
score: 63.3
IPR006119Resolvase, N-terminal catalytic domainPFAMPF00239Resolvasecoord: 70..194
e-value: 1.1E-19
score: 71.0
IPR006119Resolvase, N-terminal catalytic domainPROSITEPS51736RECOMBINASES_3coord: 68..196
score: 17.425
IPR000551MerR-type HTH domainPFAMPF13411MerR_1coord: 8..45
e-value: 1.5E-4
score: 21.8
NoneNo IPR availableGENE3D1.10.1660.10coord: 6..68
e-value: 1.1E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR30461:SF2coord: 62..194
NoneNo IPR availablePANTHERPTHR30461DNA-INVERTASE FROM LAMBDOID PROPHAGEcoord: 62..194
IPR036162Resolvase-like, N-terminal catalytic domain superfamilyGENE3D3.40.50.1390coord: 69..162
e-value: 1.4E-21
score: 78.4
IPR036162Resolvase-like, N-terminal catalytic domain superfamilySUPERFAMILY53041Resolvase-likecoord: 69..192
IPR006118Recombinase, conserved sitePROSITEPS00397RECOMBINASES_1coord: 72..80
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 6..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:689449..690036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16179.1mRNA_C-linearis_contig85.16179.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 689449..690036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16179.1 ID=prot_C-linearis_contig85.16179.1|Name=mRNA_C-linearis_contig85.16179.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=196bp
MQSDEYVTTSNASRILGVHPNTLRKWDRTNTIECIRVDGGNRLFNISKFK
RDQSRDAKLQNKKEKKRTHAIYCRVSSAKQTEDLRRQIENLETSYPGFQV
FSDTGSGINFKRKGFKRLLREVMHGHLGTVVVSYRDRLCRIAFDLLEWIC
DEHQTKLLVHNQDQEGSDEKELLEDLMAIVHVFSSRLYGKRSNKSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006119Resolv_N
IPR000551MerR-type_HTH_dom
IPR036162Resolvase-like_N_sf
IPR006118Recombinase_CS
IPR009061DNA-bd_dom_put_sf