prot_C-linearis_contig85.16173.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16173.1
Unique Nameprot_C-linearis_contig85.16173.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length250
Homology
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 1.220e-70
Identity = 121/219 (55.25%), Postives = 160/219 (73.06%), Query Frame = 0
Query:    1 MMIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLNR--NPTVLIYGWLFRYIHIALDTIVLYGALVERKMSERGDGTSSGSVD 217
            MM+ VCWT++ L GFIKA+KF E  + NM+AIT+LAICVNLALIV +HR +TRV+SVSS  L+ L LAIS  + +V++P W+T+ V G  F I+ SD+   D + VS F++E +VGICMF+I+A LLLFRMKE+ + W+I  RIRYYF LTL+GTAVN+G+GIC  V V+     P + I+ W+ RYIH+ALDT VLYG L E+ M ERG    S + +
Sbjct:   72 MMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNARSSNYN 290          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.080e-68
Identity = 126/232 (54.31%), Postives = 157/232 (67.67%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLNRNPT--VLIYGWLFRYIHIALDTIVLYGALVERKMSERG------DGTSSGSVDLPSGRPVP 225
            MI+VCW    LEGFIKA+K+ E  + NMLAITNLAIC+NLAL+V +HR ++RV SVS+  L++LFLAIS + AA S+PFW   VV G  F +  +D+A  D++ VS   +E VVGICMFIIV+ L+ FRM+ I + WK+H RIRYYF LT++GTAVNL +GI G   V   N    +L   W FRY H+ALDTIVLYG L  R M E G       GTSSG +   SG P P
Sbjct:    8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSGRLPASSGLPRP 239          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 5.120e-67
Identity = 113/209 (54.07%), Postives = 152/209 (72.73%), Query Frame = 0
Query:    1 MMIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLN--RNPTVLIYGWLFRYIHIALDTIVLYGALVERKMSER 207
            MM+ VCW   +LE  IK +KF ELA+ +MLA+T+LAICVNLALIV +HR + RV+SVSS  L+ L LAIS  + A ++P W+T++V G  F I+ SD+   D + VS F++E +VG+CMF+IVA LLLFR+KE+ + W+IH RIRYY  LT++GT ++L +GIC  V VL   +   + I+ W+FRYIHIALDT VLYG L E+ M ER
Sbjct:   23 MMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER 231          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 6.480e-66
Identity = 108/200 (54.00%), Postives = 144/200 (72.00%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLN--RNPTVLIYGWLFRYIHIALDTIVLYGAL 199
            M+ VCW  +++ GF+KA+KF EL A NMLAITNLAIC NLAL++++HR + RVKS SS  L+ L LA+S  +A  + PFW T VV G  F +   D+   D++ VS F++E +VGICMF+IVA LLLFR+ E+ + WK+H RIRYYFGLTL+GT VNL +G+CG + V+       +++  W FR+IHIALDT VLYG L
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 3.250e-63
Identity = 113/231 (48.92%), Postives = 158/231 (68.40%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLNRN--PTVLIYGWLFRYIHIALDTIVLYGALVERKMSERGDGTSSGSVDLPSGRPVPGRGTR 230
            MI+VCW   +L  FIK +KF EL A NMLAITNLAICVNL+LIV++ R  + VKS+S+  L++LFLA+S  LAA+++PFW   V+ G  F  +G ++ D +F+ +S F VE +VGICMF+IV+ LLLFRM EI + W +H  +RYYFGLTL+GT  NL +G+CG + V++    P ++I+ W FR + IALDTIVL+  L  + + ER +   +     P+  P   RG+R
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPTDGAS-PAPPPASSRGSR 230          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 6.880e-62
Identity = 109/215 (50.70%), Postives = 144/215 (66.98%), Query Frame = 0
Query:    1 MMIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLN--RNPTVLIYGWLFRYIHIALDTIVLYGALVERKMSERGDGTSS 213
            +M++ C+  T+L G IK I F  + + NMLA TNL IC+NLALIV +HR +TRVK+VSS  ++ + L +S  LAA ++P W+T VV G  F    SD   +DF+ +S + +E +VGICM +IV  L +FRM EI + W+ H RIRYYF LTL GTAVNLG+GICG   V    + P   I+ WLFRYIHI+ DT+VLYGAL E  + ER +   S
Sbjct:   22 VMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAEADRS 236          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 4.430e-56
Identity = 100/172 (58.14%), Postives = 126/172 (73.26%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLNRN 173
            MI+VCW    LEGFIKA+K+ E  + NMLAITNLAIC+NLAL+V +HR ++RVKSVS+  L++LFLAIS I AA S+PFW   VV G  F +  +D+A  D++ VS   +E VVGICMF+IV+ L+ FRM+ I + WKIH RIRYYF LTL+ TAVNL +GI GL  V   N
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.000e-53
Identity = 96/168 (57.14%), Postives = 126/168 (75.00%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNV 169
            M++VCW   SL   IK +KFFELAA NMLAITNLAICVNLALIV++HR ++RV+S S+  LI++FLA+S  +AA+S+PFW  +VV G  F +   ++A  D++ V+ F+VE  VGICM +IV  L++FR  EI  SWK+H RIRYYFGLTL+ T VNL +GICG + V
Sbjct:   99 MVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 4.600e-49
Identity = 94/174 (54.02%), Postives = 121/174 (69.54%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRKVTRVKSVSSLPLIV---LFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLVNVLNR 172
            MI+VCW   +L   IK +KF ELA+ NMLA+TNLAICVNLAL+V++HR ++RV S+SS P ++   L LA+ G  AA ++P W TI++ G  F     D+ D D+  VS F  E +VGICM  IVA LLLFRMKEI + WK+H RIRYYFGLTL+ T VNL +GI G V ++  
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSS-PRVIWLSLVLAVGG--AAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGE 171          
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.680e-46
Identity = 90/167 (53.89%), Postives = 119/167 (71.26%), Query Frame = 0
Query:    2 MIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHR-KVTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEADDDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGLTLVGTAVNLGVGICGLV 167
            MI+VCWT  +L   IK  KF ELA+ NMLA+TNLAIC+NLAL+V++H  +   V S+SS  LIV+ L IS   AA + PFW+ I++ G  F     ++   D++ +S F++E  VGICMF+IVA LLLFRM EI + WK+H RIRYYFGLTL+ T VNL +GICG++
Sbjct:    5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVI 171          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FTK5_ECTSI1.220e-7055.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8K6_9PHAE1.080e-6854.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK4_ECTSI5.120e-6754.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN1_ECTSI6.480e-6654.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNP0_ECTSI3.250e-6348.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWL8_9PHAE6.880e-6250.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI4.430e-5658.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM4_ECTSI1.000e-5357.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE4.600e-4954.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI1.680e-4653.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..175
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 180..199
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:526994..534145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16173.1mRNA_C-linearis_contig85.16173.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 507897..534581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16173.1 ID=prot_C-linearis_contig85.16173.1|Name=mRNA_C-linearis_contig85.16173.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=250bp
MMIAVCWTDTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVLAHRK
VTRVKSVSSLPLIVLFLAISGILAAVSIPFWDTIVVFGALFGIIGSDEAD
DDFMNVSYFWVELVVGICMFIIVAGLLLFRMKEINDSWKIHRRIRYYFGL
TLVGTAVNLGVGICGLVNVLNRNPTVLIYGWLFRYIHIALDTIVLYGALV
ERKMSERGDGTSSGSVDLPSGRPVPGRGTRTGSEGPNNMSKPVAITPVA*
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