prot_C-linearis_contig85.16170.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16170.1
Unique Nameprot_C-linearis_contig85.16170.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1339
Homology
BLAST of mRNA_C-linearis_contig85.16170.1 vs. uniprot
Match: D7G8X5_ECTSI (Similar to Fe65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X5_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 5.520e-121
Identity = 654/1419 (46.09%), Postives = 735/1419 (51.80%), Query Frame = 0
Query:    1 MGRRRVRAGAPPSDVAVGSDGGTRSASSTSISTDPARHTDSSSNGLPSAAXXXXXXXXXXXXNNPLMGLLHYGSESDXXXXXXXXXXXXXXTESNNISPALAAQGXXXXXXXXXXXXPAAAGEVTIAYLLPPGWQQCMDDAGLVYFWKTGTGETAWDPPEGTETRRSLATPTAVAAAAAACADPSNGTAAAGGETQAGSDGTSDTASEAEED--------------SRE-------------------VDTKSAAAARAAGVSGDNSGEEDSNVQATPTDEGKAPRRSRRSAVIDHLARKGKYGGATAKKDGADGRAPPQQSAAEKTDAIAAAPGGTAAGVDDLLAGIEAELLSG-GDGGGAADR-KDETSA-----DGD----GGEEEFSQLRLVEPGLYKRAREAHADLTASLAAXXXXXXXXXXXXXXXXXXXXXXXVGRLGIELGAVLCARLSDWREGGLGGTFLVLKLEEMAAQARSALGPDPPFELDDATALAADPSVNGNAAGETADAEASGGKRSGEDGSEKRRG----VRGGAATVATAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELSRAETTAQKLKWADEVSAAXXXXXXXXXXXXXXXXXXAKAELKAKTEAAPGANEEKKGTESLSGSKRGRHSKDGSDAAATA-KTAAKGDTSAVASSDAADSAAXAATVEGAIALGGVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSRKEVDTGETETGIVIAKEPSPAGVVPRGWAAVFDATSQSHYYHNIATDETTWLLPTAAAXXXXXXXXXXAVAHPAEPSSKSPPVPDNPAAQ-ALKPQAKEGDGSADRGDTGGAAPASRKKRSQRREKXXXXXXXXXXXXXXXXXXXSGEE-----------------GAASVGSSTXXXXXXXXXKPRNGKPAAVDATTAIAAKGGDSAXXXXXXXXXXXXXXTESLPSPWVAVWDDTQQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG------------KSHS--KEGSQTPXXXXXXXXXXXXXTWPPVVDLRPSTLVWWSDAGDVWNGMALSGLLGGYGPRRYRNLGGGYYMTTLELGPDWATAAVAALGQGVVDPVSAARADWVSCTASAPGYGLFLRFSGDDDEQKLFDVPEEYFEXXXXXXXXXXXXXXXXXSYAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTAPAXXXXXXXXXXXXXXXXKGKGSXXXKSGGSIGKKRKGAASLIDKWKAVASTAGEEAEREAEKQEKMERWKARAAALDPDNPNFTPIGKKRR 1338
            MGRR VR  APPSD AVG   G  S SS                      XXXXX        NPLMGLLHYGS+S+XXXXX           + + SPA                        ++ Y LP GWQQCMD+AGLVYFW T TG+T+WDPPEGTE + S A+      + A    P     AA  E  AGSD TSDTASEAEED              SR                    VDT+           G  SGE++    A P       +RS RSA     A+  +      ++ G +    PQQS +  T + +  P    AG+DDLLAGIEAELL G GDG G  D  KDE        +GD    G EE+F+ L+ V PGL  RA+EAHA+L A LA                          RLGIEL AVL ARLSDWR+G            E A  A S+      +           PSV   A                     +RR     VR G ++    ++S                                                +  RA   A+KLKWADEVSAA XXXXXXXXXXXXXXXXXAKAE +AK        E    +E  +  +RG+H+  G DA +   K A   DT A A           A VEG I LGGVGDXXXXXXXXXX                         +        +E+GIVIAK+P+   V P GW+AVFD T Q++YYHN+ TDET+W+LP   A            +HPA                 + K +A EGD S     TGG    S      RR       XXXXXXXXXXX   +G+                  GAAS  +S            ++ KPA   A+T  AAK GDSA                   S WV VWDD  QA               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       XXXXX              K+HS  +E   T              T   VVDLRP TLVWWSDAGDVWNG++LSGLLGGYGPRRYRNLGGGYYMTTLE GP+WATAAVAALGQGV DPV+AAR DWVSCTASAPGYGLFLRFSG+DDEQKLFDVP+EYF+XXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXKG  S   KSGGSIGKKRKGAA+LIDKWKAVASTAGEEAE+EAEKQEKMERWKARAAA+DPDNPNFTPIGK+RR
Sbjct:    1 MGRRPVRRAAPPSDGAVGGVAGIPSPSSXXXXXXXXXXXXXXXXXXX-XXXXXXXPKGDTGGKNPLMGLLHYGSDSEXXXXXAQQPASASSVSTPDPSPA-----------------------ESVTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGTERKVSKASSAVDTPSEAPPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVAXXXXXEDEGASRXXXXXXXXXXXXXXXVSEVCVDTEEV-------EKGAVSGEQEVADSAIP-------KRSPRSATDRPAAQDRRMAAVGEEQKGEEEL--PQQSKSTGTGS-SDVPVAATAGIDDLLAGIEAELLLGAGDGEGDLDGDKDEVKGSAVEENGDTRATGEEEDFAPLQEVAPGLDVRAQEAHAELAALLAVAAEGKGEEAGLSVVEATDPSV----RLGIELAAVLRARLSDWRQGECMDGI------EAALTAPSSFSSSRRWRW-----RLVQPSVRLLAP------------------QHQRRPDSLKVRLGRSSPLPLMSSP-----------------------------------------------QAVRAARNAEKLKWADEVSAAAXXXXXXXXXXXXXXXXXAKAESEAKVAVIGTVEEGVTDSEGSNSDRRGKHAASGDDATSDKRKNATSTDTLATAR----------AIVEGTIDLGGVGDXXXXXXXXXXKEDGEVTVVPAATEGGAATSGAKDDAPSVPAPDTSESGIVIAKDPTLPDV-PSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVAE-----------SHPAXXXXXXXXXXXXXXXXXSKKSKADEGDAS-----TGGGERRSESSNRSRRRGSPGDEXXXXXXXXXXXSNSAGKSVETKLEKRSSRRRDVASGAASSEAS------------QDEKPAPA-ASTDAAAKEGDSASIPESLSRIDN--------STWVPVWDDNHQAFYYHDTVTDETSWDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGGAQQRSPSPEPSTASPNAESXXXXXXXXXXXXXVTADAPKAHSATEEDVATAATPAASAAAAEAPT-TSVVDLRPCTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLERGPEWATAAVAALGQGVADPVAAARMDWVSCTASAPGYGLFLRFSGEDDEQKLFDVPDEYFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXKGS-SATGKSGGSIGKKRKGAANLIDKWKAVASTAGEEAEKEAEKQEKMERWKARAAAMDPDNPNFTPIGKRRR 1237          
BLAST of mRNA_C-linearis_contig85.16170.1 vs. uniprot
Match: A0A6H5JJN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN1_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.870e-66
Identity = 365/1002 (36.43%), Postives = 455/1002 (45.41%), Query Frame = 0
Query:    1 MGRRRVRAGAPPSDVAVGSDGGTRSASSTSISTDPARHTDSSSNGLPSAAXXXXXXXXXXXXNNPLMGLLHYGSESDXXXXXXXXXXXXXXTESNNISPALAAQGXXXXXXXXXXXXPAAAGEVTIAYLLPPGWQQCMDDAGLVYFWKTGTGETAWDPPEGTETRRSLATPTAVAAAAAACADPSNGTAAAGGETQAGSDGTSDTASEAEED-------------SREVDTKSAAAARAAGVSGDNSGEEDSNVQA-------TPTDEGKAPRRSRRSAVIDHLARKGKYGGATAKKDGADGRAPPQQSAAEKTDAIAAAPGGTAAGVDDLLAGIEAELL-SGGDGGGAADRKDETSAD------GD----GGEEEFSQLRLVEPGLYKRAREAHADLTASLAAXXXXXXXXXXXXXXXXXXXXXXXVGRLGIELGAVLCARLSDWREG---------GLGGTFLVLKLEEMAAQARSALGPDP---------------------------PFELDDATALAADPSVNGNAAGETADAEA---SGGKRSGEDGSEKRRGVRGGAATVATAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELSRAETTAQKLKWADEVSAAXXXXXXXXXXXXXXXXXXAKAELKAKTEAAPGANEEKKGTESLSGSKRGRHSKDGSDAAATAKT-AAKGDTSAVASSDAADSAAXAATVEGAIALGGVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSRKEVDTGETETGIVIAKEPSPAGVVPRGWAAVFDATSQSHYYHNIATDETTWLLPTAAAXXXXXXXXXXAVAHPAEPSS-KSPPVPDNPAAQALKPQAKEGDGSADRGDTGGAAPASRKKRSQRREKXXXXXXXXXXXXXXXXXXXSGEEGAASVGSSTXXXXXXXXXKPRNGKPAAVDATTAIAAKGGDSAXXXXXXXXXXXXXXTESLPSPWVAVWDDTQQA 930
            MGRR VR  APPSD AVG   G  S SS++ +T   +   +++ G P+AA             NPLMGLLHYGS+S+                + + SPA                        ++ Y LP GWQQCMD+AGLVYFW T TG+T+WDPPEGT+T+ S  +      + A    P     AA  E  AGSD TSDTASEAEED             +    T S+  A AA  +    G +   V+           D G  P+ S RSA     A+  +      ++ G  G   PQQS +  T + +  P    AG+DDLLAGIEAELL  GGDG G  D   + + D      GD    G E++F+ LR V PGL  RA++AHA+L A LA                          RLGIEL AVL ARLSDWR+G         GL GTF VLKLEEMAA+ARSALGP                             P  +   ++  + P V     G+ A+ +A   S GK+S +  S+KR  VRG A   A+A                                              XXXX    RA   A+KLKWADEVSA XXXXXXXXXXXXXXXXXX                +E   ++  +  +R +H+  G DA +  +  A   DT A A           A VEG I LGGVGDXXXXXXXXXXXXXXXXXXXXXXXXX          S    DT E+  GIVIAK+P+   V P GW+AVFD T Q++YYHN+ TDET+W+LP   A            +HPA+  S KS P  D    +  K +A EGD S  RG+    +    ++R    ++                     +    S                ++ KPA   A+T  AAK GDSA               ESL S WV VWDD  +A
Sbjct:    1 MGRRPVRRAAPPSDGAVGGVAGIPSPSSSAAATSEGK-VPAAAAGEPAAAAPKGDTGG----KNPLMGLLHYGSDSEEEEPPAQKPASASSVSTPDPSPA-----------------------ESLTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGTQTKVSKTSSAVDTPSEALPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVALAGVTVDEGANRASTNSSGVAGAAAPAVSKVGVDTEEVEEGAVSGGQEAADRGATPKGSPRSAADPPAAQDRRMTAVGEEQKG--GEELPQQSKSTGTGS-SDVPVAATAGIDDLLAGIEAELLLGGGDGEGKLDGDKDEAKDSAVEENGDTRSTGEEQDFAPLREVAPGLDARAQKAHAELAALLAVAAEGKGEEAGSSVVQATDPSV----RLGIELAAVLRARLSDWRQGKCMDRIGVGGLDGTFFVLKLEEMAAEARSALGPSSCPTAHRATGQSQSQTRPELAASMDAITPGAMGAVSSAGSLPDVADPPPGDAAERDATAVSDGKKS-KGHSKKRPRVRGAATKAASA----------DNGEAVSTRSVDDGVAEGVPASHATDDNASSSTASGXXXXXXAVRAARNAEKLKWADEVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTVEKEVTDSQGSNSDRRRKHAASGDDATSDKRNHATSTDTLATAR----------AIVEGTIDLGGVGDXXXXXXXXXXXXXXXXXXXXXXXXXATAGAKDDAASVPAPDTRES--GIVIAKDPTLPDV-PSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVAE-----------SHPADSKSVKSSPERDERPREIKKSKADEGDASTGRGERRSESSNLSRRRGSPGDEGGREHAEASAAINFAGKSVETKHEKRSSRKRDVESGATSSTASQDEKPAPA-ASTDAAAKEGDSASIP------------ESLSSTWVRVWDDNHEA 919          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8X5_ECTSI5.520e-12146.09Similar to Fe65 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JJN1_9PHAE4.870e-6636.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 581..608
NoneNo IPR availableCOILSCoilCoilcoord: 1206..1226
NoneNo IPR availableGENE3D2.20.70.10coord: 911..963
e-value: 2.5E-7
score: 32.2
coord: 731..783
e-value: 2.7E-6
score: 28.9
coord: 128..173
e-value: 1.5E-9
score: 39.3
NoneNo IPR availablePANTHERPTHR47852FAMILY NOT NAMEDcoord: 109..239
IPR001202WW domainSMARTSM00456ww_5coord: 915..948
e-value: 1.6E-5
score: 34.3
coord: 129..161
e-value: 4.5E-7
score: 39.5
coord: 731..764
e-value: 0.36
score: 19.9
IPR001202WW domainPFAMPF00397WWcoord: 916..944
e-value: 4.6E-8
score: 33.0
coord: 732..762
e-value: 5.2E-7
score: 29.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 920..946
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 736..762
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 128..161
score: 12.866
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 730..764
score: 11.605
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 914..948
score: 12.452
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 729..765
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 912..947
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 128..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:450148..456258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16170.1mRNA_C-linearis_contig85.16170.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 449287..456258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16170.1 ID=prot_C-linearis_contig85.16170.1|Name=mRNA_C-linearis_contig85.16170.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1339bp
MGRRRVRAGAPPSDVAVGSDGGTRSASSTSISTDPARHTDSSSNGLPSAA
GAAAAAAGEKDDNNPLMGLLHYGSESDEDEDETPAGSHSHSTESNNISPA
LAAQGGATAAAASSSSNPAAAGEVTIAYLLPPGWQQCMDDAGLVYFWKTG
TGETAWDPPEGTETRRSLATPTAVAAAAAACADPSNGTAAAGGETQAGSD
GTSDTASEAEEDSREVDTKSAAAARAAGVSGDNSGEEDSNVQATPTDEGK
APRRSRRSAVIDHLARKGKYGGATAKKDGADGRAPPQQSAAEKTDAIAAA
PGGTAAGVDDLLAGIEAELLSGGDGGGAADRKDETSADGDGGEEEFSQLR
LVEPGLYKRAREAHADLTASLAAAAAAASAKKDGGAGAGSASGGGGVGRL
GIELGAVLCARLSDWREGGLGGTFLVLKLEEMAAQARSALGPDPPFELDD
ATALAADPSVNGNAAGETADAEASGGKRSGEDGSEKRRGVRGGAATVATA
VASAGADQTADAAKAKARKGGADGDAGATAAASSAGAGDSGGAAAGDGDG
AELSRAETTAQKLKWADEVSAAASAAVAAAAALARAKKDQAKAELKAKTE
AAPGANEEKKGTESLSGSKRGRHSKDGSDAAATAKTAAKGDTSAVASSDA
ADSAAAAATVEGAIALGGVGDGDDEEDREVTAAAAAAAAAAAAAAGASAG
AEGTTTSRKEVDTGETETGIVIAKEPSPAGVVPRGWAAVFDATSQSHYYH
NIATDETTWLLPTAAAAAAAAAAAATAVAHPAEPSSKSPPVPDNPAAQAL
KPQAKEGDGSADRGDTGGAAPASRKKRSQRREKGSSERADGSGAAKTATT
KRSGEEGAASVGSSTSTSTSTSISKPRNGKPAAVDATTAIAAKGGDSASA
STSTGTGTGTGTTESLPSPWVAVWDDTQQAYYYHNTATDETSWQTPPASS
AAAAAPAAGADPSSSGKQKKKKTRKDAKSSSGDAAAPDSAQPPRSAPPAA
EGVGASTRASDGSARARRKSSSPPAATSTGKSHSKEGSQTPTTPAAPTAA
AAAATWPPVVDLRPSTLVWWSDAGDVWNGMALSGLLGGYGPRRYRNLGGG
YYMTTLELGPDWATAAVAALGQGVVDPVSAARADWVSCTASAPGYGLFLR
FSGDDDEQKLFDVPEEYFEDPPPDPSLAAAEEAAAASYAAQAGAASAAAT
AQAAALAEAEAAAETAEMEAAAAAAVAATEEAEAAGSKAVEAAMTAPAAA
ASSSSSSSTTSKKRKGKGSSAAKSGGSIGKKRKGAASLIDKWKAVASTAG
EEAEREAEKQEKMERWKARAAALDPDNPNFTPIGKKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf