prot_C-linearis_contig85.16166.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16166.1
Unique Nameprot_C-linearis_contig85.16166.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length127
Homology
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BLAST of mRNA_C-linearis_contig85.16166.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.180e-60
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MMRRPPARPGLG-KKPSGAGFKITYSMNQLLSMGKEMMESEAGCPPPEGWDTFQYDTIGPLIDENSTRVPSKEEAAALKMKPGSARDLHKDHIAALAAKQGTDPEPSPVLGPRGGGDR 117
            MMRRPP R GLG KK SG GFKITYS+NQLLSMGKE+MESEAGCPPPEGWD ++YDTIGPLIDEN+TR+PSKEEAAALKMKPGSARDLH +HIAAL AKQG DP+ SP LGPRGGGDR
Sbjct:    1 MMRRPPTRAGLGGKKASGTGFKITYSVNQLLSMGKELMESEAGCPPPEGWDKYEYDTIGPLIDENNTRIPSKEEAAALKMKPGSARDLHSEHIAALVAKQGADPDQSPSLGPRGGGDR 118
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y0_ECTSI1.180e-6083.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:407500..408025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16166.1mRNA_C-linearis_contig85.16166.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 407500..408437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16166.1 ID=prot_C-linearis_contig85.16166.1|Name=mRNA_C-linearis_contig85.16166.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=127bp
MMRRPPARPGLGKKPSGAGFKITYSMNQLLSMGKEMMESEAGCPPPEGWD
TFQYDTIGPLIDENSTRVPSKEEAAALKMKPGSARDLHKDHIAALAAKQG
TDPEPSPVLGPRGGGDRGRGGSDARRE
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