prot_C-linearis_contig85.16165.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16165.1
Unique Nameprot_C-linearis_contig85.16165.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length367
Homology
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BLAST of mRNA_C-linearis_contig85.16165.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.400e-57
Identity = 200/335 (59.70%), Postives = 226/335 (67.46%), Query Frame = 0 
Query:   50 DGLHDGGLGAHDRALAHEKAVAAGGVGAXXXXXXXXXXXXRGG-----RYGGSNEADIWDMPGSAL-EGGA-KEPPKNSRAAGLRSSDRERREKDRKKDEALAFEQELLQFQKERAKVLEARDGYVRGKSKGGPTEFPDMGGGFLGGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGNRNGDKQKPS-----SFMDHLFXXXXXXXXXXXXXXXEAVAESGXXXXXXXXXG---------------FPVGGLFSFMAPGNSISTIDKFTEATRGKGVAKMFSNSPGNQPTASPSVSASLSRWGKANPNPKADAKPVAGV 357
            DGLHDGGLGAHDRA+AHEKA+AAGG   XXXXXXXXXXXX        RYGG++EADIWDMP +   +GGA KEPPKN+RAAGLRS+DRERRE++RKKDEA AFE+E L+F++ERAKVL+ RDG   GK+ GGP EFPDMGGGFLGGG+  XXXXXXXXXXXXXXXXXXXXXX                   G+ +G + +P      S +D +F      XXXXXXXXX       XXXXXXXXX                FP GGLFSFMAPGNSISTIDKFTEATRGKG AK+FS  PG +P A+P        WGK       D KP A V
Sbjct:  262 DGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGGTSEADIWDMPTTLPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVLQGRDG---GKANGGPAEFPDMGGGFLGGGIGDXXXXXXXXXXXXXXXXXXXXXX-----------------XXGSGSGSQDQPQLVKNQSVLDRVFGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRGKGNAKIFS--PGTKPAATP--------WGKV------DKKPTANV 560
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y0_ECTSI1.400e-5759.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:402436..406606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16165.1mRNA_C-linearis_contig85.16165.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 402435..406606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16165.1 ID=prot_C-linearis_contig85.16165.1|Name=mRNA_C-linearis_contig85.16165.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=367bp
GQDARTGGGRDRDRDGGGRNPRSGRDRDREDRDRDRDRDRDRDRDRDRGD
GLHDGGLGAHDRALAHEKAVAAGGVGAASAAPGGGGGSSRGGRYGGSNEA
DIWDMPGSALEGGAKEPPKNSRAAGLRSSDRERREKDRKKDEALAFEQEL
LQFQKERAKVLEARDGYVRGKSKGGPTEFPDMGGGFLGGGLGDDDDGGGG
LLGGIEDDHPPPLSTPSASNGAGGGGDGDGGRAPGNRNGDKQKPSSFMDH
LFGGGGGGGGGGGQKGGEAVAESGQGGAVAGGGGFPVGGLFSFMAPGNSI
STIDKFTEATRGKGVAKMFSNSPGNQPTASPSVSASLSRWGKANPNPKAD
AKPVAGVNGGGGGEGGG
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