prot_C-linearis_contig85.16143.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16143.1
Unique Nameprot_C-linearis_contig85.16143.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length173
Homology
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BLAST of mRNA_C-linearis_contig85.16143.1 vs. uniprot
Match: D8LP48_ECTSI (EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.110e-44
Identity = 109/154 (70.78%), Postives = 126/154 (81.82%), Query Frame = 0 
Query:    4 VQALLYAFDGKRTSSTVNAGKRTALQLAARENHAPVVEKLLNAGADVNFRSSSDGRYXXXXXXXXXXXXXXXXXXXXXXXKDAKRGLPATWSVGANDKTPLVEAIENGHFPVVETLLFKGADVTVDVGCCTRDLGNKSLQSIDFAALRGDNDIM 157
            V+ L+ + DG+   ++V    RT LQLA+RE H  VVE+L+ AGADVNFRS +DG  XXXXXXXXXXXXXXXXXXXXXX +DA RGL +TW+VGAN KTPLVEAIENGHFPVV+TLL KGAD T+DVGC  RDLG+ SL+ IDFAALRGDNDIM
Sbjct:   21 VRTLVKSADGRLALNSVQDAGRTPLQLASREGHVLVVEELVAAGADVNFRSPNDGXXXXXXXXXXXXXXXXXXXXXXXXEEDAGRGLSSTWTVGANLKTPLVEAIENGHFPVVQTLLSKGADATLDVGCSMRDLGDMSLRPIDFAALRGDNDIM 174
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BLAST of mRNA_C-linearis_contig85.16143.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 4.550e-7
Identity = 39/103 (37.86%), Postives = 45/103 (43.69%), Query Frame = 0 
Query:   26 TALQLAARENHAPVVEKLLNAGADVNFRSSSDGRYXXXXXXXXXXXXXXXXXXXXXXXKDAKRGLPATWSVGANDKTPLVEAIENGHFPVVETLLFKGADVTV 128
            T L  AA   H PV+E LL+ GAD  FR   DG                         KD         S  AN +TPL+EA   GH PVV+TLL   ADVT+
Sbjct:   88 TPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKD---------SPAANGRTPLMEASRKGHLPVVKTLLNADADVTL 181
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP48_ECTSI1.110e-4470.78EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI[more]
D7FVI9_ECTSI4.550e-737.86Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 73..87
score: 44.82
coord: 24..39
score: 33.49
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 99..128
e-value: 0.0051
score: 26.0
coord: 23..52
e-value: 4.4E-4
score: 29.6
coord: 57..86
e-value: 1.4E-4
score: 31.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 57..89
score: 12.983
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 99..131
score: 10.018
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 23..55
score: 11.968
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..167
e-value: 2.2E-30
score: 107.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 18..155
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 28..128
e-value: 4.0E-17
score: 62.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 23..131
score: 28.353
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 15..125
NoneNo IPR availablePANTHERPTHR24126:SF44coord: 15..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:12815..13333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16143.1mRNA_C-linearis_contig85.16143.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 12788..14039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16143.1 ID=prot_C-linearis_contig85.16143.1|Name=mRNA_C-linearis_contig85.16143.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=173bp
MGTVQALLYAFDGKRTSSTVNAGKRTALQLAARENHAPVVEKLLNAGADV
NFRSSSDGRYALHIAAGKGNNTIVNLLLEAGADKDAKRGLPATWSVGAND
KTPLVEAIENGHFPVVETLLFKGADVTVDVGCCTRDLGNKSLQSIDFAAL
RGDNDIMIDRPFEQDRHDGRCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom