prot_C-linearis_contig84.16132.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16132.1
Unique Nameprot_C-linearis_contig84.16132.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length881
Homology
BLAST of mRNA_C-linearis_contig84.16132.1 vs. uniprot
Match: D8LMT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT0_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 7.100e-138
Identity = 372/911 (40.83%), Postives = 416/911 (45.66%), Query Frame = 0
Query:    1 MNHAEAFGHLRSFVVGLEVKARDLRKVLESSRDKDGKWVNGKDGTGIGERCARAVGAASPEQVTKDMIAEVAEQDKLMRQVEDTMRTEHPIQEATEKYQALVEYNQLALEDLEERLAAYGYVRPARVCLNNEGAVD---PPAVSSVARLPARTKTAEKSTKENGGRGDGNTGXXXXXXXXXXXXXXAPAECREEKEP---VARGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDHSHGAENSAAMAGEPGMGEEDETASAD---------QEEKGGVVTPARPALVVREEPEGEPGSPPTPASP-------GLADWEIMEE--TREMLRRAQPXXXXXXXXXXXXXXXXTNATAPRSLEALLAENTADPAAXXXXXXXXXXXXXSSNWSPPPSTTKDALSRYGSGSSGSSGGQSTCVGVKGHGRRGGGVXXXXXXXXXXXXXXXSTAVTGTGASMSAWGSSSNPPTPARMGFEDDGRWTPGGQAAPVAGVGG-RESSLGSPGLSFTSPLKNDATAHLVETAMSCGKQLD-ASTPSEKDS--NGPVMSPPKPTPMQRSSLQGDEASLEGSLPKKGPRGDFWGNTSPASSVVASSQEGTGEQPAPMGPATPATPKVLSPRFRIESSGXXXXXXXXXXXXXXXXXXXXXXXXGSSGRVTRLSSRNMAAIPNVAGGXXGGIVNDNNSTRSGSGRDEEELDGYDSERCPAPELSSPLRSTNISARDLQVLTPSVARADCGGNSTLGNGSYRRDGXXXXXXXXXXXXDSDACPTPELSSPLRSAGSAALCRRRLEEAGGDADAYDDQAASGGG----PLELVSEEEYAKAPKFLTIQVSRSVLNDTIRNLNAYAAPRLATPSELLLTVDEIMAIIDQGELSRTLLLSAAHLKRIEMKGHRMYRIR 879
            M+HAEAFG L SF+VGLE KARDLRKVLESSR++DGKWVNGKDGTGIGERC+RA+GAASP QVTK+MIAEVAEQD+LMRQ E+TMRT+ PI+EATEKYQALVEYNQLALEDLEERL+AYGYVRPARV L+   AV    PP VSSVARLP   KT        GGR   N                 P +C         VA GD     XXXX                             G   + G E  A         EE+E A AD             GGV TPAR A  +    EGE                 GLADWEI E   +R   RR Q                       R     +     D                            D      SG +G++                                   T +TG  A+    GSSSNPPTPARM FE    WTP  +    AGVGG R SS G+P L F SPL +D TA L+ETA+S GK+ D ASTPSE+ +  +G  ++ PKPTP++R SLQG+EAS+ G LPK GPRGDFWGN SP SSVVASS+E T E   P  P TP TP                                                                                                                                                                        AALCRRRLEEA GD    DD   +G G    PL+ VSEEEYA+APKFLTIQVSRSVLNDTI NLNAYA PRLA+PSELLLTVDEIM IIDQGELSRTLLLSAAHLKRIEMKG RMYRIR
Sbjct:    1 MSHAEAFGQLGSFMVGLETKARDLRKVLESSRNEDGKWVNGKDGTGIGERCSRAIGAASPGQVTKEMIAEVAEQDRLMRQAEETMRTDRPIEEATEKYQALVEYNQLALEDLEERLSAYGYVRPARVALDTNTAVATAAPPGVSSVARLPTGAKT--------GGRPAAN-----------GCHKSRPHQCETRGGGGGFVAAGDGAATAXXXXAAGTEKEGDAESGEGLEAGGVTTGAEAFVGSGVAGGGEVGAEE-------EEEEDAIADGAVAXXXXXXXGTGGVATPARAASTLPVPQEGEXXXXXXXXXXXXXXXXXGLADWEITEAGLSRSSSRRQQ-----------------------RRRSCGVGVGRVD----------------------------DGTPSESSGGAGAA----------------------------------DTPMTGRAAASPWGGSSSNPPTPARMKFEG---WTP--EERDPAGVGGNRVSSTGTPSLGFRSPLNSDVTASLIETALSVGKRPDVASTPSEEGACRSGTEITRPKPTPIKRVSLQGNEASVTGGLPK-GPRGDFWGNASPESSVVASSRENTAEH-RPDPPRTPETPAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------AALCRRRLEEADGDGSRGDDDEVAGVGGSIGPLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYAEPRLASPSELLLTVDEIMGIIDQGELSRTLLLSAAHLKRIEMKGPRMYRIR 627          
BLAST of mRNA_C-linearis_contig84.16132.1 vs. uniprot
Match: A0A6H5JNT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT8_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.270e-33
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0
Query:  804 APKFLTIQVSRSVLNDTIRNLNAYAAPRLATPSELLLTVDEIMAIIDQGELSRTLLLSAAHLKRIEMKGHRMYRIR 879
            APKFLTIQVSRSVLN+T+ NLNAYAAPRLA+PSELLLTVDEIM IIDQGELSRTLLLSAAHLKRIEMKG RMYRIR
Sbjct:    3 APKFLTIQVSRSVLNETVGNLNAYAAPRLASPSELLLTVDEIMGIIDQGELSRTLLLSAAHLKRIEMKGPRMYRIR 78          
BLAST of mRNA_C-linearis_contig84.16132.1 vs. uniprot
Match: A0A6H5JWA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA7_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.640e-32
Identity = 98/192 (51.04%), Postives = 113/192 (58.85%), Query Frame = 0
Query:  636 SGRVTRLSSRNMAAIPNVAGGXXGGIVNDN-NSTRSGSGRDE-EELDGYDSERCPAPELSSPLRSTNISARDLQVLTPSVARADCGGNSTLGNGSYRRDGXXXXXXXXXXXXDSDACPTPELSSPLRSAGSAALCRRRLEEAGGDADAYDDQAASG----GGPLELVSEEEYAKA---------PKFLTIQV 812
            S RVTR  SR M    + A    GG V+ N N+   GS  D     DG+DS+ CP PELSSPLRS  +S RDLQVLTPS       G    G  +Y  D        XXXXX S+ CPTPELSSPLRSAGSAALCRRRLEEAGGD    DD   +G     GPL+ VSEEEYA+A         P++L++ V
Sbjct:   29 SDRVTRSPSRAMKPAASKAADGPGGDVDANVNTDWRGSDHDGCGSSDGFDSDACPTPELSSPLRSATVSVRDLQVLTPSAMVNTADGGGHRGGSTYNYD--------XXXXXXSEQCPTPELSSPLRSAGSAALCRRRLEEAGGDGGRGDDDEVAGVGGTSGPLDFVSEEEYARAGGVPRCNSPPRWLSVAV 212          
BLAST of mRNA_C-linearis_contig84.16132.1 vs. uniprot
Match: A0A4D9D5B5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5B5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.330e-8
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 0
Query:  792 PLELVSEEEYAKAPKFLTIQVSRSVLNDTIRNLNAYAAPRL--ATPSELLLTVDEIMAIIDQGELSRTLLLSAAHLKRIEM----KGHRMYRI 878
            P+  V EEE+A+AP F+ IQV+R +LND I+  N++   +          L +D++  II QG+LS+T+LLS AHLKR+ M    +G R Y+I
Sbjct:  965 PIPEVPEEEFARAPSFIQIQVTREMLNDAIKVFNSHMKGKQHGGKSGVQALPLDQVTEIIAQGDLSKTILLSLAHLKRVGMSMTTQGQRAYKI 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMT0_ECTSI7.100e-13840.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNT8_9PHAE2.270e-3392.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWA7_9PHAE1.640e-3251.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D5B5_9STRA1.330e-843.01Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:691139..698253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16132.1mRNA_C-linearis_contig84.16132.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 691101..698773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16132.1 ID=prot_C-linearis_contig84.16132.1|Name=mRNA_C-linearis_contig84.16132.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=881bp
MNHAEAFGHLRSFVVGLEVKARDLRKVLESSRDKDGKWVNGKDGTGIGER
CARAVGAASPEQVTKDMIAEVAEQDKLMRQVEDTMRTEHPIQEATEKYQA
LVEYNQLALEDLEERLAAYGYVRPARVCLNNEGAVDPPAVSSVARLPART
KTAEKSTKENGGRGDGNTGGGGDDGVVAAGGSDAPAECREEKEPVARGDS
SACQQEEEDEEGGEERSGGLAVNNSGEAAEASACASSGGDHSHGAENSAA
MAGEPGMGEEDETASADQEEKGGVVTPARPALVVREEPEGEPGSPPTPAS
PGLADWEIMEETREMLRRAQPQQQQQQQQQQQATRAATNATAPRSLEALL
AENTADPAAAAGSGAGGRRSSVSSNWSPPPSTTKDALSRYGSGSSGSSGG
QSTCVGVKGHGRRGGGVAGVGSPAEGARAAGASTAVTGTGASMSAWGSSS
NPPTPARMGFEDDGRWTPGGQAAPVAGVGGRESSLGSPGLSFTSPLKNDA
TAHLVETAMSCGKQLDASTPSEKDSNGPVMSPPKPTPMQRSSLQGDEASL
EGSLPKKGPRGDFWGNTSPASSVVASSQEGTGEQPAPMGPATPATPKVLS
PRFRIESSGGGSGGGGGGGEADDGGVAAAASVAGSSGRVTRLSSRNMAAI
PNVAGGGSGGIVNDNNSTRSGSGRDEEELDGYDSERCPAPELSSPLRSTN
ISARDLQVLTPSVARADCGGNSTLGNGSYRRDGGGDDDRGGGSGDDSDAC
PTPELSSPLRSAGSAALCRRRLEEAGGDADAYDDQAASGGGPLELVSEEE
YAKAPKFLTIQVSRSVLNDTIRNLNAYAAPRLATPSELLLTVDEIMAIID
QGELSRTLLLSAAHLKRIEMKGHRMYRIRA*
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