prot_C-linearis_contig84.16129.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16129.1
Unique Nameprot_C-linearis_contig84.16129.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length236
Homology
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A6H5JWA0_9PHAE (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWA0_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.910e-93
Identity = 153/226 (67.70%), Postives = 169/226 (74.78%), Query Frame = 0
Query:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRASRRARE 226
            MLHVVLFRPLIPANTGNIGRTCLGFGARLHL+KPLGFDLSEREVKRAGLDHW HVDL VH+SW CFTES LP   H++ G      NIYLVSKRLKLGSTPIA+V+FF  TP  P +    G        G +  L  + TVG S+ S             DVTLVFGNEVDGLSGLEEG +GR+LPAV+LPMRDDVIRSYNL+NAVAMAVYEV RQRR + R R+
Sbjct:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLVKPLGFDLSEREVKRAGLDHWEHVDLAVHNSWTCFTESMLPVLSHNNSG---GGGNIYLVSKRLKLGSTPIAEVDFFAPTPKPPPIAAQPG--------GGAGELS-SDTVGSSACSQG-----------DVTLVFGNEVDGLSGLEEGERGRALPAVYLPMRDDVIRSYNLSNAVAMAVYEVDRQRREAPRIRD 203          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2V6T7M5_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6T7M5_9BACT)

HSP 1 Score: 114 bits (284), Expect = 3.290e-28
Identity = 85/220 (38.64%), Postives = 103/220 (46.82%), Query Frame = 0
Query:    3 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRAS 221
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L++REVKRAGLD+W H+DL V  SW  F E  LPT G             Y  S +                                      + RL   + +G S+                V LVFG E DGL   L E  + R    V +P+   ++RS NL+ +VA+AVYEV RQRRAS
Sbjct:    4 HVVLVHPEIHWNTGNAGRTCLATGATLHLIEPLGFSLADREVKRAGLDYWEHLDLRVWPSWDAF-EHELPTLGEP-----------YFFSPK--------------------------------------ATRLVWDAPLGASNG---------------VVLVFGRETDGLPAELLERYRDR---LVAMPILSPLVRSLNLSTSVAIAVYEVLRQRRAS 155          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A7W1II99_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7W1II99_9BACT)

HSP 1 Score: 108 bits (271), Expect = 2.770e-26
Identity = 82/219 (37.44%), Postives = 99/219 (45.21%), Query Frame = 0
Query:    3 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRA 220
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L +R++KRAGLD+W HVDL V   W  F E  LPT G             Y  S +                                      + RL   + +G                 E V LVFG E  GL   L E  + R    V +P+   ++RS NLA++VA+AVYEV RQRRA
Sbjct:    4 HVVLVHPEIHGNTGNAGRTCLAAGATLHLIEPLGFSLDDRQLKRAGLDYWAHVDLHVWPGWEAF-ERVLPTLGEP-----------YFFSTK--------------------------------------ATRLLWDAPLGAP---------------ESVVLVFGREAAGLPDVLHERYRDRF---VAMPIVTPIVRSLNLASSVAIAVYEVVRQRRA 154          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: M2Y4W0_GALSU (tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4W0_GALSU)

HSP 1 Score: 107 bits (268), Expect = 5.830e-25
Identity = 75/218 (34.40%), Postives = 105/218 (48.17%), Query Frame = 0
Query:    2 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSGLEEGA--KGRSLPAVFLPMRDD-VIRSYNLANAVAMAVYEVHR 216
            ++VVLF+P IP NTGNIGRTCL FGA+LHLI PLGF + E  V+RAGLD+W +VD      W  F E  +P   H           IY ++ +   G+  +  V F                                 T G                   V L+FG+E +G   L   A  KG S   V++PM++  ++RS+NL+NAVA+A++E+H+
Sbjct:   85 INVVLFQPKIPGNTGNIGRTCLAFGAKLHLIGPLGFSIDEHAVRRAGLDYWKYVDWKYSSCWEDF-EKGVPENSH-----------IYFITTQ---GTVSLERVTF--------------------------------KTTG------------------PVFLIFGSETEGFQQLPIKALDKGTS---VYIPMQNKHIVRSHNLSNAVAIALWELHK 234          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A6B2LL55_9EUKA (SpoU_methylase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LL55_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 6.100e-25
Identity = 55/107 (51.40%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNF 107
            MLHVVL RP IP NTG+IGRTCL F A+LHL+ PLGF L   +VKRAGLD+W HVDL+V+D W  F E       H            YL     K GST + D  F
Sbjct:    1 MLHVVLVRPQIPTNTGSIGRTCLNFDAKLHLVGPLGFSLDSSKVKRAGLDYWQHVDLSVYDDWEHFEEKNRELLVH----------RFYLS----KFGSTSLLDARF 93          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A521TEG9_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A521TEG9_9BACT)

HSP 1 Score: 105 bits (261), Expect = 7.840e-25
Identity = 77/219 (35.16%), Postives = 95/219 (43.38%), Query Frame = 0
Query:    2 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGL-SGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRR 219
            +HVVL  P I  NTGN GRTCL  GA LHL++PLGF L +R+VKRAGLD+W HVDL V   W  F E  LP  G             +      +L   P+                 GE                                       ED  L+FG E  GL S + E    R    V +P+  + +RS NL+ +VA+AVYEV RQRR
Sbjct:    1 MHVVLVHPEIHWNTGNAGRTCLAVGATLHLVEPLGFSLDDRQVKRAGLDYWEHVDLRVWPDWGAF-ERALPALGEPW---------FFSTKATRELWDAPL-----------------GES--------------------------------------EDAVLIFGRETGGLPSEVREKYNDR---LVKIPILSEHVRSLNLSTSVALAVYEVMRQRR 151          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A7X7IV97_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7IV97_9BACT)

HSP 1 Score: 105 bits (261), Expect = 9.230e-25
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    2 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLP 72
            +H+VLF+P IP NTG IGR C+G G  LHL++PLGF L+E +VKRAGLD+W+H+DL VHD+W  F E+  P
Sbjct:    5 VHIVLFQPEIPHNTGAIGRVCVGLGWPLHLVRPLGFHLAEHQVKRAGLDYWDHLDLRVHDTWAAFLETVRP 75          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2G4JMF3_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacterium sp. TaxID=1872119 RepID=A0A2G4JMF3_9BACT)

HSP 1 Score: 104 bits (260), Expect = 1.200e-24
Identity = 79/220 (35.91%), Postives = 101/220 (45.91%), Query Frame = 0
Query:    2 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRA 220
            +HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L +R+VKRAGLD+W HVDL V  +W  F E+ LP  G                               FF  T                     + RL   + +G +               ++  L+FG E  GL   L E  + R    V +P+    +RS NL+N+VA+AVYEV RQ+RA
Sbjct:    1 MHVVLVHPDIHWNTGNAGRTCLAAGATLHLIEPLGFSLDDRQVKRAGLDYWEHVDLRVWPNWEAF-EAQLPALGEP-----------------------------FFFST--------------------KATRLLWDAPLGTA---------------QEAVLIFGRETGGLPPELHEQYRDRF---VAMPILSSRVRSLNLSNSVAVAVYEVLRQQRA 152          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: UPI0019C2B4EE (tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=UPI0019C2B4EE)

HSP 1 Score: 104 bits (260), Expect = 1.230e-24
Identity = 79/220 (35.91%), Postives = 95/220 (43.18%), Query Frame = 0
Query:    3 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLK--LGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGL-SGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRR 219
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L EREVKRAGLD+W HVD+ V   W  F E  LP  G             Y  S +        P+A  N                                                       DV L+FG E  GL + L E  + +    V +PM   ++RS NL+ +VA+AV+EV RQRR
Sbjct:    5 HVVLVHPEIHWNTGNAGRTCLATGATLHLIEPLGFSLGEREVKRAGLDYWEHVDVRVWPDWETF-ERELPALGVP-----------YFFSTKATQVFWDAPLASDN-------------------------------------------------------DVVLIFGRETGGLPADLHERYRNQF---VTMPMMSPLVRSLNLSTSVAVAVFEVLRQRR 154          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2E7M5F3_9DELT (tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7M5F3_9DELT)

HSP 1 Score: 103 bits (257), Expect = 3.340e-24
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGH 76
            MLHVVL  P+IP NTG +GR C+  GARLHL++PLGFD+ E+ V+RAGLD+W +VDL VH  W    ++ LP P H
Sbjct:    1 MLHVVLVEPVIPQNTGTVGRLCVATGARLHLVEPLGFDIDEKAVRRAGLDYWKNVDLNVHADWEAC-QAALPAPPH 75          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWA0_9PHAE1.910e-9367.70SpoU_methylase domain-containing protein n=2 Tax=E... [more]
A0A2V6T7M5_9BACT3.290e-2838.64Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7W1II99_9BACT2.770e-2637.44Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
M2Y4W0_GALSU5.830e-2534.40tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Gald... [more]
A0A6B2LL55_9EUKA6.100e-2551.40SpoU_methylase domain-containing protein n=1 Tax=A... [more]
A0A521TEG9_9BACT7.840e-2535.16Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7X7IV97_9BACT9.230e-2560.56Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A2G4JMF3_9BACT1.200e-2435.91Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
UPI0019C2B4EE1.230e-2435.91tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax... [more]
A0A2E7M5F3_9DELT3.340e-2457.89tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 155..227
e-value: 2.2E-12
score: 48.6
coord: 1..112
e-value: 5.9E-29
score: 102.6
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 2..69
e-value: 8.9E-14
score: 51.9
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferasePANTHERPTHR42971FAMILY NOT NAMEDcoord: 1..219
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferaseHAMAPMF_01885tRNA_methyltr_TrmLcoord: 2..221
score: 28.568
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 2..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:671140..673436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16129.1mRNA_C-linearis_contig84.16129.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 671132..673668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16129.1 ID=prot_C-linearis_contig84.16129.1|Name=mRNA_C-linearis_contig84.16129.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLD
HWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGST
PIADVNFFPRTPPLPGVVPGEGVGEGSSDGGASRRLDLASTVGGSSDSGS
GGGEGGGRFVEDVTLVFGNEVDGLSGLEEGAKGRSLPAVFLPMRDDVIRS
YNLANAVAMAVYEVHRQRRASRRARERPAAGVGAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR001537SpoU_MeTrfase
IPR016914tRNA_cyt/urid_MeTfrase
IPR029028Alpha/beta_knot_MTases