mRNA_C-linearis_contig84.16129.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig84.16129.1
Unique NamemRNA_C-linearis_contig84.16129.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A6H5JWA0_9PHAE (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWA0_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 2.450e-92
Identity = 154/231 (66.67%), Postives = 170/231 (73.59%), Query Frame = 3
Query:    9 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRASRRARERPAAG 701
            MLHVVLFRPLIPANTGNIGRTCLGFGARLHL+KPLGFDLSEREVKRAGLDHW HVDL VH+SW CFTES LP   H++ G      NIYLVSKRLKLGSTPIA+V+FF  TP  P +    G        G +  L  + TVG S+ S             DVTLVFGNEVDGLSGLEEG +GR+LPAV+LPMRDDVIRSYNL+NAVAMAVYEV RQRR + R R+    G
Sbjct:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLVKPLGFDLSEREVKRAGLDHWEHVDLAVHNSWTCFTESMLPVLSHNNSG---GGGNIYLVSKRLKLGSTPIAEVDFFAPTPKPPPIAAQPG--------GGAGELS-SDTVGSSACSQG-----------DVTLVFGNEVDGLSGLEEGERGRALPAVYLPMRDDVIRSYNLSNAVAMAVYEVDRQRREAPRIRDTGRGG 208          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2V6T7M5_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6T7M5_9BACT)

HSP 1 Score: 113 bits (283), Expect = 3.260e-27
Identity = 85/220 (38.64%), Postives = 103/220 (46.82%), Query Frame = 3
Query:   15 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRAS 671
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L++REVKRAGLD+W H+DL V  SW  F E  LPT G             Y  S +                                      + RL   + +G S+                V LVFG E DGL   L E  + R    V +P+   ++RS NL+ +VA+AVYEV RQRRAS
Sbjct:    4 HVVLVHPEIHWNTGNAGRTCLATGATLHLIEPLGFSLADREVKRAGLDYWEHLDLRVWPSWDAF-EHELPTLGEP-----------YFFSPK--------------------------------------ATRLVWDAPLGASNG---------------VVLVFGRETDGLPAELLERYRDR---LVAMPILSPLVRSLNLSTSVAIAVYEVLRQRRAS 155          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A7W1II99_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7W1II99_9BACT)

HSP 1 Score: 108 bits (270), Expect = 2.550e-25
Identity = 82/219 (37.44%), Postives = 99/219 (45.21%), Query Frame = 3
Query:   15 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRA 668
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L +R++KRAGLD+W HVDL V   W  F E  LPT G             Y  S +                                      + RL   + +G                 E V LVFG E  GL   L E  + R    V +P+   ++RS NLA++VA+AVYEV RQRRA
Sbjct:    4 HVVLVHPEIHGNTGNAGRTCLAAGATLHLIEPLGFSLDDRQLKRAGLDYWAHVDLHVWPGWEAF-ERVLPTLGEP-----------YFFSTK--------------------------------------ATRLLWDAPLGAP---------------ESVVLVFGREAAGLPDVLHERYRDRF---VAMPIVTPIVRSLNLASSVAIAVYEVVRQRRA 154          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: M2Y4W0_GALSU (tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4W0_GALSU)

HSP 1 Score: 107 bits (267), Expect = 5.270e-24
Identity = 75/218 (34.40%), Postives = 105/218 (48.17%), Query Frame = 3
Query:   12 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSGLEEGA--KGRSLPAVFLPMRDD-VIRSYNLANAVAMAVYEVHR 656
            ++VVLF+P IP NTGNIGRTCL FGA+LHLI PLGF + E  V+RAGLD+W +VD      W  F E  +P   H           IY ++ +   G+  +  V F                                 T G                   V L+FG+E +G   L   A  KG S   V++PM++  ++RS+NL+NAVA+A++E+H+
Sbjct:   85 INVVLFQPKIPGNTGNIGRTCLAFGAKLHLIGPLGFSIDEHAVRRAGLDYWKYVDWKYSSCWEDF-EKGVPENSH-----------IYFITTQ---GTVSLERVTF--------------------------------KTTG------------------PVFLIFGSETEGFQQLPIKALDKGTS---VYIPMQNKHIVRSHNLSNAVAIALWELHK 234          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A6B2LL55_9EUKA (SpoU_methylase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LL55_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 5.380e-24
Identity = 55/107 (51.40%), Postives = 63/107 (58.88%), Query Frame = 3
Query:    9 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNF 329
            MLHVVL RP IP NTG+IGRTCL F A+LHL+ PLGF L   +VKRAGLD+W HVDL+V+D W  F E       H            YL     K GST + D  F
Sbjct:    1 MLHVVLVRPQIPTNTGSIGRTCLNFDAKLHLVGPLGFSLDSSKVKRAGLDYWQHVDLSVYDDWEHFEEKNRELLVH----------RFYLS----KFGSTSLLDARF 93          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A521TEG9_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A521TEG9_9BACT)

HSP 1 Score: 104 bits (260), Expect = 6.790e-24
Identity = 77/219 (35.16%), Postives = 95/219 (43.38%), Query Frame = 3
Query:   12 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGL-SGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRR 665
            +HVVL  P I  NTGN GRTCL  GA LHL++PLGF L +R+VKRAGLD+W HVDL V   W  F E  LP  G             +      +L   P+                 GE                                       ED  L+FG E  GL S + E    R    V +P+  + +RS NL+ +VA+AVYEV RQRR
Sbjct:    1 MHVVLVHPEIHWNTGNAGRTCLAVGATLHLVEPLGFSLDDRQVKRAGLDYWEHVDLRVWPDWGAF-ERALPALGEPW---------FFSTKATRELWDAPL-----------------GES--------------------------------------EDAVLIFGRETGGLPSEVREKYNDR---LVKIPILSEHVRSLNLSTSVALAVYEVMRQRR 151          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A7X7IV97_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7IV97_9BACT)

HSP 1 Score: 104 bits (260), Expect = 7.990e-24
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = 3
Query:   12 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLP 224
            +H+VLF+P IP NTG IGR C+G G  LHL++PLGF L+E +VKRAGLD+W+H+DL VHD+W  F E+  P
Sbjct:    5 VHIVLFQPEIPHNTGAIGRVCVGLGWPLHLVRPLGFHLAEHQVKRAGLDYWDHLDLRVHDTWAAFLETVRP 75          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2G4JMF3_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacterium sp. TaxID=1872119 RepID=A0A2G4JMF3_9BACT)

HSP 1 Score: 104 bits (259), Expect = 1.030e-23
Identity = 79/220 (35.91%), Postives = 101/220 (45.91%), Query Frame = 3
Query:   12 LHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGLSG-LEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRRA 668
            +HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L +R+VKRAGLD+W HVDL V  +W  F E+ LP  G                               FF  T                     + RL   + +G +               ++  L+FG E  GL   L E  + R    V +P+    +RS NL+N+VA+AVYEV RQ+RA
Sbjct:    1 MHVVLVHPDIHWNTGNAGRTCLAAGATLHLIEPLGFSLDDRQVKRAGLDYWEHVDLRVWPNWEAF-EAQLPALGEP-----------------------------FFFST--------------------KATRLLWDAPLGTA---------------QEAVLIFGRETGGLPPELHEQYRDRF---VAMPILSSRVRSLNLSNSVAVAVYEVLRQQRA 152          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: UPI0019C2B4EE (tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=UPI0019C2B4EE)

HSP 1 Score: 104 bits (259), Expect = 1.060e-23
Identity = 79/220 (35.91%), Postives = 95/220 (43.18%), Query Frame = 3
Query:   15 HVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLK--LGSTPIADVNFFPRTPPLPGVVPGEGVXXXXXXXGASRRLDLASTVGGSSDSXXXXXXXXGRFVEDVTLVFGNEVDGL-SGLEEGAKGRSLPAVFLPMRDDVIRSYNLANAVAMAVYEVHRQRR 665
            HVVL  P I  NTGN GRTCL  GA LHLI+PLGF L EREVKRAGLD+W HVD+ V   W  F E  LP  G             Y  S +        P+A  N                                                       DV L+FG E  GL + L E  + +    V +PM   ++RS NL+ +VA+AV+EV RQRR
Sbjct:    5 HVVLVHPEIHWNTGNAGRTCLATGATLHLIEPLGFSLGEREVKRAGLDYWEHVDVRVWPDWETF-ERELPALGVP-----------YFFSTKATQVFWDAPLASDN-------------------------------------------------------DVVLIFGRETGGLPADLHERYRNQF---VTMPMMSPLVRSLNLSTSVAVAVFEVLRQRR 154          
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Match: A0A2E7M5F3_9DELT (tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7M5F3_9DELT)

HSP 1 Score: 103 bits (256), Expect = 2.820e-23
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 3
Query:    9 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLDHWNHVDLTVHDSWRCFTESTLPTPGH 236
            MLHVVL  P+IP NTG +GR C+  GARLHL++PLGFD+ E+ V+RAGLD+W +VDL VH  W    ++ LP P H
Sbjct:    1 MLHVVLVEPVIPQNTGTVGRLCVATGARLHLVEPLGFDIDEKAVRRAGLDYWKNVDLNVHADWEAC-QAALPAPPH 75          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWA0_9PHAE2.450e-9266.67SpoU_methylase domain-containing protein n=2 Tax=E... [more]
A0A2V6T7M5_9BACT3.260e-2738.64Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7W1II99_9BACT2.550e-2537.44Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
M2Y4W0_GALSU5.270e-2434.40tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Gald... [more]
A0A6B2LL55_9EUKA5.380e-2451.40SpoU_methylase domain-containing protein n=1 Tax=A... [more]
A0A521TEG9_9BACT6.790e-2435.16Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7X7IV97_9BACT7.990e-2460.56Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A2G4JMF3_9BACT1.030e-2335.91Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
UPI0019C2B4EE1.060e-2335.91tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax... [more]
A0A2E7M5F3_9DELT2.820e-2357.89tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:671132..673668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue4.1e-74
Seed eggNOG ortholog2880.D8LMT2
KEGG koko:K03216
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SpoU rRNA Methylase family
EggNOG OGs2QQ5S@2759,COG0219@1
EC2.1.1.207
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons4
Model size948
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16129.1prot_C-linearis_contig84.16129.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig84 671140..673436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930640.4129772-UTR-C-linearis_contig84:671131..6711391622930640.4129772-UTR-C-linearis_contig84:671131..671139Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 671132..671139 +
1690881173.8647306-UTR-C-linearis_contig84:671131..6711391690881173.8647306-UTR-C-linearis_contig84:671131..671139Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 671132..671139 +
1622930640.503458-UTR-C-linearis_contig84:673436..6736681622930640.503458-UTR-C-linearis_contig84:673436..673668Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 673437..673668 +
1690881173.9214363-UTR-C-linearis_contig84:673436..6736681690881173.9214363-UTR-C-linearis_contig84:673436..673668Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 673437..673668 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930640.4312572-CDS-C-linearis_contig84:671139..6712371622930640.4312572-CDS-C-linearis_contig84:671139..671237Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 671140..671237 +
1690881173.878664-CDS-C-linearis_contig84:671139..6712371690881173.878664-CDS-C-linearis_contig84:671139..671237Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 671140..671237 +
1622930640.448531-CDS-C-linearis_contig84:671778..6718681622930640.448531-CDS-C-linearis_contig84:671778..671868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 671779..671868 +
1690881173.8917255-CDS-C-linearis_contig84:671778..6718681690881173.8917255-CDS-C-linearis_contig84:671778..671868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 671779..671868 +
1622930640.4684422-CDS-C-linearis_contig84:672270..6727001622930640.4684422-CDS-C-linearis_contig84:672270..672700Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 672271..672700 +
1690881173.901288-CDS-C-linearis_contig84:672270..6727001690881173.901288-CDS-C-linearis_contig84:672270..672700Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 672271..672700 +
1622930640.4851873-CDS-C-linearis_contig84:673346..6734361622930640.4851873-CDS-C-linearis_contig84:673346..673436Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 673347..673436 +
1690881173.9096317-CDS-C-linearis_contig84:673346..6734361690881173.9096317-CDS-C-linearis_contig84:673346..673436Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 673347..673436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig84.16129.1

>prot_C-linearis_contig84.16129.1 ID=prot_C-linearis_contig84.16129.1|Name=mRNA_C-linearis_contig84.16129.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MLHVVLFRPLIPANTGNIGRTCLGFGARLHLIKPLGFDLSEREVKRAGLD
HWNHVDLTVHDSWRCFTESTLPTPGHSSDGTNTAKSNIYLVSKRLKLGST
PIADVNFFPRTPPLPGVVPGEGVGEGSSDGGASRRLDLASTVGGSSDSGS
GGGEGGGRFVEDVTLVFGNEVDGLSGLEEGAKGRSLPAVFLPMRDDVIRS
YNLANAVAMAVYEVHRQRRASRRARERPAAGVGAL*
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mRNA from alignment at C-linearis_contig84:671132..673668+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig84.16129.1 ID=mRNA_C-linearis_contig84.16129.1|Name=mRNA_C-linearis_contig84.16129.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2537bp|location=Sequence derived from alignment at C-linearis_contig84:671132..673668+ (Chordaria linearis ClinC8C monoicous)
CGACGACCATGCTGCATGTTGTGCTCTTCCGACCTCTAATCCCTGCAAAC ACCGGGAATATCGGCCGCACTTGCTTGGGCTTCGGAGCCCGTCTACATCT GATCAAGTACTACGTGTATACGTGGTTTACCCTAGAGCAGGCGCACGCTT GACGTACTCCTACTTTGTATTTCGCCTCCAAAGCAGTGGTTTCGTGAGTG TTTTGACTTGTGCGTTGCCATTAGATGCTTGTGCGTTGGAATATCTGTGG CTATTGGTGGCCGCAAAATGGACTTCGCACTTCGCACCCTGTCTACTTGC TGTTATCGATTTTTGGATATCGTGTGATGTATCCAACCTTTAAGTATCAA ACAACAGACACAAGCAGTTCGAGCACGTGGCATACGATGCTATACTCCGC AAAACCGTCAACCGGATACTGCTGTGTGTGTTCCACAAGCGCGAGCGGCC CCTGATCCCTGGCGTGGGTGCGGGTGTCGGTTGTTTCGTGCGTTTGATGC GTCCTGTCCAGGCATCCAGCCCTGGACCCCCGTCTCTCCTATATACTTGT ATTCGAACACACTTATTCAAACTGTTCTGGCCTGAAAGCCCTGAATATAC CTCGAACAACGCTTGTTACTGCTATGTGTTTACTGCTTTGTCTTCAGGCC GCTGGGATTCGACCTGAGCGAGCGTGAAGTGAAGCGGGCAGGGCTGGATC ACTGGAATCACGTCGATCTAACCGTGCACGACAGCTGGTGAGACGAGAGT TAACTAGTACTCCGAGTAGTTCGGGCAGCACGTTTGACCTAATATCTACC TTGCTGGGGCGTCAACAACGTGCACTGGGTGGCCATTTCACTTTACGCTG TGAGGAGGAAATCCCAGGCGGATCGTTAATTAGTCGATGTTGTTCTCAAA GTCGAACGTTACTCCAGTTACGATAACCCGCTCCTTTTTCGGAGAGGGTT GAGCAGAAACTGAAAGTACTCGATCAACATCGGTGCCGAACGTTCTTTAT CCAGAGCCGCATGTTTATGATGGACGCTGCCACCTCCTACAGTACATTCT GATACATGTTTACCCGGTTGGCCGTGTGGCCACACCCCTCTACGCACACC ATGTACCGGTCTGCGTCCCCCCCGCATGCATGAACAAAGGCGATGCTTCA CCGAGAGCACCCTGCCTACGCCGGGCCACAGCAGCGACGGCACCAACACC GCCAAATCAAACATTTACCTGGTGTCGAAACGTCTCAAGCTCGGGTCTAC TCCCATCGCGGACGTCAACTTCTTCCCGCGAACACCACCATTACCAGGGG TTGTTCCGGGGGAAGGGGTAGGCGAAGGCTCATCGGACGGTGGCGCATCT CGGAGGTTAGACTTAGCGTCCACAGTGGGCGGCAGTAGCGATAGCGGCAG CGGCGGTGGCGAGGGCGGCGGGAGATTTGTCGAAGATGTCACGCTAGTGT TCGGCAACGAGGTGGACGGACTGTCAGGTCTGGAAGAAGGTGCCAAGGGC CGCTCTCTGCCGGCCGTTTTCCTGCCCATGCGCGACGACGTTATTCGATC GTACAACCTCGCCAACGCGGTAAGTTGTTTGTTCAGAGGTTCTACTAATT AGCGCACGCTGTCAGAGCCTAAATTGCTTGTTCTTCGAGCCCGCTTGATT CTCCGGCCTGCTCGACGGGACAAAAGTGACCACGAGTTTCGCACAAGAAG TCCTTCTGTTGTTGACATGCAGCTCTGTTTGCGAGTCTTCTCCCTGTCTT CCCTTTTGTTCACCCTGCGGGCTACTGCCGTGTACTACAGTAGTACCGGG TTTTAAAATCCGTGTTCGGGTGAAAATTGCGCTGGTTTCCTTTTTTTCTC TGCCCTCGCGGGCCCTGCGTCTTTTCTCTCCGGGCACCCACTCAAGTTTT CTCATGCCATGAAACTCGCCGTCCTTCCAACGCTTCAGCACGCACCACCC AGGTCGTCGCAAGCGGTGAAAGTATCTCGGCAAGATGTCAATGTGGTGGA AACAAAGAGGTCGGCCGCAACCGTCTTACTCACAAAGAATCTTGTGCGTT TTCCTTTGTGGTATTTCCCACCTCCCATTCTCGACCATTCTCGACCATTC GCCTGACCATTTGCCTGACCATTACCATTTGGTGCCTTTTGTTTTCGTGC CGCACCGCACCGCTTGCACCCCGTGCTCACCTCCCTCTCTTGGCCCTGCT GCGTGTGCTCTTCAGGTAGCGATGGCCGTGTATGAGGTACACAGGCAGCG GAGGGCGAGCCGACGAGCCAGGGAGAGACCGGCGGCAGGCGTTGGTGCAT TGTAGGAGCAAGATGTGATGTAGCGCAAGGACGTCTATCTCTAGCGCGTG GTGGAGGTGCTGAATGGGCTGCTTGGTGTCGACGTCATTCAAGAAACATT GGGGCGCTGAATGGCATGGAAAAAATTGGGGCGTGTTGCAACATTCGCAA AAAAGCTGGAGCATAAGAGACACAGAACGAAAGCGTTTGCGTTCGTTCGA GAAAGCGTTAGTGTCGATCAAGCCCATCGAAAACGAC
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Coding sequence (CDS) from alignment at C-linearis_contig84:671132..673668+

>mRNA_C-linearis_contig84.16129.1 ID=mRNA_C-linearis_contig84.16129.1|Name=mRNA_C-linearis_contig84.16129.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig84:671132..673668+ (Chordaria linearis ClinC8C monoicous)
ATGCTGCATGTTGTGCTCTTCCGACCTCTAATCCCTGCAAACACCGGGAA
TATCGGCCGCACTTGCTTGGGCTTCGGAGCCCGTCTACATCTGATCAAAT
GCTGCATGTTGTGCTCTTCCGACCTCTAATCCCTGCAAACACCGGGAATA
TCGGCCGCACTTGCTTGGGCTTCGGAGCCCGTCTACATCTGATCAAGCCG
CTGGGATTCGACCTGAGCGAGCGTGAAGTGAAGCGGGCAGGGCTGGATCA
CTGGAATCACGTCGATCTAACCGTGCACGACAGCTGGCCGCTGGGATTCG
ACCTGAGCGAGCGTGAAGTGAAGCGGGCAGGGCTGGATCACTGGAATCAC
GTCGATCTAACCGTGCACGACAGCTGGCGATGCTTCACCGAGAGCACCCT
GCCTACGCCGGGCCACAGCAGCGACGGCACCAACACCGCCAAATCAAACA
TTTACCTGGTGTCGAAACGTCTCAAGCTCGGGTCTACTCCCATCGCGGAC
GTCAACTTCTTCCCGCGAACACCACCATTACCAGGGGTTGTTCCGGGGGA
AGGGGTAGGCGAAGGCTCATCGGACGGTGGCGCATCTCGGAGGTTAGACT
TAGCGTCCACAGTGGGCGGCAGTAGCGATAGCGGCAGCGGCGGTGGCGAG
GGCGGCGGGAGATTTGTCGAAGATGTCACGCTAGTGTTCGGCAACGAGGT
GGACGGACTGTCAGGTCTGGAAGAAGGTGCCAAGGGCCGCTCTCTGCCGG
CCGTTTTCCTGCCCATGCGCGACGACGTTATTCGATCGTACAACCTCGCC
AACGCGGCGATGCTTCACCGAGAGCACCCTGCCTACGCCGGGCCACAGCA
GCGACGGCACCAACACCGCCAAATCAAACATTTACCTGGTGTCGAAACGT
CTCAAGCTCGGGTCTACTCCCATCGCGGACGTCAACTTCTTCCCGCGAAC
ACCACCATTACCAGGGGTTGTTCCGGGGGAAGGGGTAGGCGAAGGCTCAT
CGGACGGTGGCGCATCTCGGAGGTTAGACTTAGCGTCCACAGTGGGCGGC
AGTAGCGATAGCGGCAGCGGCGGTGGCGAGGGCGGCGGGAGATTTGTCGA
AGATGTCACGCTAGTGTTCGGCAACGAGGTGGACGGACTGTCAGGTCTGG
AAGAAGGTGCCAAGGGCCGCTCTCTGCCGGCCGTTTTCCTGCCCATGCGC
GACGACGTTATTCGATCGTACAACCTCGCCAACGCGGTAGCGATGGCCGT
GTATGAGGTACACAGGCAGCGGAGGGCGAGCCGACGAGCCAGGGAGAGAC
CGGCGGCAGGCGTTGGTGCATTGTAGGTAGCGATGGCCGTGTATGAGGTA
CACAGGCAGCGGAGGGCGAGCCGACGAGCCAGGGAGAGACCGGCGGCAGG
CGTTGGTGCATTGTAG
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