prot_C-linearis_contig84.16125.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16125.1
Unique Nameprot_C-linearis_contig84.16125.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length229
Homology
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: D8LMS2_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS2_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 3.440e-141
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 0
Query:   12 ATVALRGSVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            ATVALRG VLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLK+NGQL+CGFTGLWTDVLTVMQDLSSEVALKSL E DRPI+PAALA LLSTLLYSRRGSP+FVEPIVAGLD +G+PYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFR GMEREELFR ASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD
Sbjct:    4 ATVALRGGVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 220          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A835YVV6_9STRA (Proteasome beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 8.130e-73
Identity = 124/221 (56.11%), Postives = 161/221 (72.85%), Query Frame = 0
Query:    4 LLGAAVFAATVALRGSVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDD-FVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETREL 223
            L+GAA+  A +A + S      PLELNGGSCL MAG+ C+A+AVD+RFG   +LVS  A+RVLK++ +L+C FTGL TDV T+MQDL++  A  ++ EG RP+ PAA AALLS++LY+RR SP+F E IVAGL    + ++   D+LGA    +D F V GTSA+SLYG CEAF+R  M  EEL   A  CL++ALERDCLSG+G VVHL+TE+GI +REL
Sbjct:   17 LVGAALVGAALAQQQS------PLELNGGSCLVMAGRKCLAVAVDKRFGKGNELVSDNARRVLKLHSRLLCAFTGLTTDVQTLMQDLAAAAASYTITEG-RPLQPAAAAALLSSMLYARRRSPYFCETIVAGLTRSAEAFVRSHDVLGAAGGAEDGFAVMGTSAESLYGLCEAFYRPDMTPEELADTAEHCLVAALERDCLSGHGVVVHLLTEQGISSREL 230          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A6H5JNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ3_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 4.730e-68
Identity = 113/142 (79.58%), Postives = 116/142 (81.69%), Query Frame = 0
Query:   87 MQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            MQDLSSEVALKSL E DRPI+PAALA LLSTLLYSRRGSP+FVEPIVAGLD +GKPYLCGQ                    SLYGTCEAFFR GMEREELFR ASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD
Sbjct:    1 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGKPYLCGQ--------------------SLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 122          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: M2W804_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W804_GALSU)

HSP 1 Score: 214 bits (544), Expect = 7.410e-67
Identity = 107/202 (52.97%), Postives = 143/202 (70.79%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            L  NGG  LAMAG  CVA+A DRRFG++   + T+  R+ KIN +L+ G TGL TDV T+       + L  L E +R I PA+ A ++++ LYSRR SP+FVEP+VAGL  +G+PYLC QD+LGAP+  +DFVV+GT A+SLYGT E F++  +   ELF   S+ LL+A++RDCLSG+GA+VH+IT  GIET+ L  RMD
Sbjct:    6 LTYNGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVTTLYNRFVQRLNLYRLRE-EREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLSGWGAIVHMITLNGIETKVLKARMD 206          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: M1V7D3_CYAM1 (20S core proteasome subunit beta 3 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V7D3_CYAM1)

HSP 1 Score: 210 bits (534), Expect = 2.510e-65
Identity = 101/204 (49.51%), Postives = 139/204 (68.14%), Query Frame = 0
Query:   25 NPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            NPL  NGG+  A  G  CVA+A DRRFG     ++ +A R+ +++ +LV G TGL TD LT+ + +     L  LGE   P  PA ++AL+S LLY RR +P+FVEP++ GL    KPY C  D+LG P+E D+FV AGT A+SLYGT E F+R G++ E+LF   ++C+L+AL+RDCLSG+GAVV+++  EG+  REL  RMD
Sbjct:    5 NPLHYNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTLAERVRMRTNLYRLGEKREP-KPATISALVSALLYERRFAPYFVEPVIVGLSGDNKPYCCSMDLLGTPMETDEFVAAGTCAESLYGTGETFWRPGLDPEDLFEVTAQCMLAALDRDCLSGWGAVVYVLHSEGVTVRELKARMD 207          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A3P3Y3V5_PLABS (Proteasome subunit beta n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y3V5_PLABS)

HSP 1 Score: 207 bits (528), Expect = 1.850e-64
Identity = 97/202 (48.02%), Postives = 146/202 (72.28%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            LE NG + +AM GK CVA+A D R+G++ Q V+T+ +++ K++ +L  G +GL TD+ TV   L  ++ L  L E +R I P   A L+ST+LYS+R  P+FVEP+VAG+D +GKP++C  D++GAPV  +DFVV+GT+++ LYGTCE+ +   +  EELF   S+ LL+A++RDCLSG+GA VH+IT++G+ +R+L  R D
Sbjct:    4 LEYNGSAIVAMVGKDCVAIASDTRYGVQAQTVATDMEKIFKMHDRLYVGLSGLATDMQTVRNTLQFQLKLYKLRE-EREIEPHVFANLVSTMLYSKRFGPYFVEPVVAGIDKKGKPFICAMDLIGAPVFAEDFVVSGTASEELYGTCESLYTPNLGPEELFETVSQALLAAVDRDCLSGWGATVHIITKDGVTSRKLKCRQD 204          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A2V3J6M2_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 7.460e-64
Identity = 99/202 (49.01%), Postives = 146/202 (72.28%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            LE NGG  LAMAGK CVA+A D+R G++   V+ +A R+ +++ +L  G TGL TD+ T+ Q    ++ L ++ E +R + P   A+L+S+ LYS+R +P+F EP++AGLD   KPY+C  D+LG   E  +FVVAGT A+SL+GTCE F++  +E +ELF   S+ LL+AL+RDC+SG+GAVVH+IT++G++T+EL  RMD
Sbjct:    4 LEYNGGCVLAMAGKECVAIASDKRLGVQLTTVAMDANRIFRMHDKLYLGLTGLMTDIQTLDQLFRFKLELYAMRE-NRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A7S3K6H9_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6H9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.500e-63
Identity = 102/202 (50.50%), Postives = 143/202 (70.79%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            LE NG + +AMAGK CVA+A D RFGL  Q V+ + ++V K++ ++  G  GL TDV T+   L  ++AL  L E +R + P A AALLS +LY +R  P+FVEP+VAGL   G P+LCG D++GAPV  +DFVV+GT A +L G CE+FFR  ME ++LF   S+CLL++++RD LSG+GA+VH+IT +G+ ++ L  RMD
Sbjct:    4 LEHNGAAIVAMAGKNCVAIASDTRFGLRQQTVTCDFEKVFKMSDKIYVGLAGLATDVQTLRATLKFKLALYKLRE-ERKMKPEAFAALLSHMLYEKRFGPYFVEPLVAGLKEDGTPFLCGMDLIGAPVFTNDFVVSGTCASNLNGLCESFFRPDMEPDDLFETISQCLLASVDRDALSGWGAIVHVITPQGVTSKRLKARMD 204          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.050e-63
Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            LE NG + +AMAGK CV +A D R G++ Q V+T+ K+V K+N +L CG  GL +DV T+ Q L     L  L E +R ++P   + LLSTLLY +R  P+FVEPIVAGLD++GKP+L G D++GAPV  DDFVV+GT   ++YG CE  ++  ME ++LF   ++ LL++++RD LSG+G VVH+IT++G+ +REL  R D
Sbjct:    4 LEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELRE-EREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204          
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A6U6IRL2_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U6IRL2_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.440e-62
Identity = 99/202 (49.01%), Postives = 141/202 (69.80%), Query Frame = 0
Query:   27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
            LE NG + +AMAGKGCV +A D R G++ Q V+T+ ++V K+N +L  G  GL TDV T+ Q L     L  L E +R +SP  ++ LLS LLY +R  P+F+EP+VAGLD  GKP+L G D++GAPV  DDFVV+GT+  +LYG CE  ++  ME ++LF   ++ LL++++RD LSG+G VVH+IT++G+ +REL  R D
Sbjct:    4 LEYNGAAIIAMAGKGCVGIASDTRLGIQAQTVATDFRKVFKMNDRLFVGLAGLATDVQTMDQLLRFRQNLYELRE-ERQMSPRVMSNLLSNLLYEKRFGPYFIEPVVAGLDENGKPFLSGMDLIGAPVYTDDFVVSGTATGNLYGMCETLYKPDMEADQLFETLAQALLASVDRDALSGWGGVVHIITKDGVMSRELKGRQD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS2_ECTSI3.440e-14194.01Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835YVV6_9STRA8.130e-7356.11Proteasome beta subunit n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNZ3_9PHAE4.730e-6879.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M2W804_GALSU7.410e-6752.97Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
M1V7D3_CYAM12.510e-6549.5120S core proteasome subunit beta 3 n=2 Tax=cellula... [more]
A0A3P3Y3V5_PLABS1.850e-6448.02Proteasome subunit beta n=2 Tax=Plasmodiophora bra... [more]
A0A2V3J6M2_9FLOR7.460e-6449.01Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
A0A7S3K6H9_9STRA1.500e-6350.50Proteasome subunit beta n=1 Tax=Aureoumbra lagunen... [more]
A0A7S2XNS4_9STRA6.050e-6349.50Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U6IRL2_9STRA2.440e-6249.01Hypothetical protein n=2 Tax=Mediophyceae TaxID=58... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 27..228
e-value: 2.1E-50
score: 173.2
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 30..227
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 30..211
e-value: 6.2E-37
score: 126.9
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 27..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.615
IPR033811Proteasome beta 3 subunitPANTHERPTHR11599:SF62PROTEASOME SUBUNIT BETA TYPE-3coord: 27..228
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 35..82
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 31..213
score: 39.034

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:628500..630069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16125.1mRNA_C-linearis_contig84.16125.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 628500..630069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16125.1 ID=prot_C-linearis_contig84.16125.1|Name=mRNA_C-linearis_contig84.16125.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=229bp
MPRLLGAAVFAATVALRGSVLASSNPLELNGGSCLAMAGKGCVALAVDRR
FGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLG
EGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDIL
GAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALER
DCLSGYGAVVHLITEEGIETRELTTRMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR033811Proteasome_beta_3
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type