prot_C-linearis_contig84.16125.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: D8LMS2_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS2_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 3.440e-141 Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 0
Query: 12 ATVALRGSVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
ATVALRG VLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLK+NGQL+CGFTGLWTDVLTVMQDLSSEVALKSL E DRPI+PAALA LLSTLLYSRRGSP+FVEPIVAGLD +G+PYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFR GMEREELFR ASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD
Sbjct: 4 ATVALRGGVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 220
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A835YVV6_9STRA (Proteasome beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV6_9STRA) HSP 1 Score: 230 bits (586), Expect = 8.130e-73 Identity = 124/221 (56.11%), Postives = 161/221 (72.85%), Query Frame = 0
Query: 4 LLGAAVFAATVALRGSVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDD-FVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETREL 223
L+GAA+ A +A + S PLELNGGSCL MAG+ C+A+AVD+RFG +LVS A+RVLK++ +L+C FTGL TDV T+MQDL++ A ++ EG RP+ PAA AALLS++LY+RR SP+F E IVAGL + ++ D+LGA +D F V GTSA+SLYG CEAF+R M EEL A CL++ALERDCLSG+G VVHL+TE+GI +REL
Sbjct: 17 LVGAALVGAALAQQQS------PLELNGGSCLVMAGRKCLAVAVDKRFGKGNELVSDNARRVLKLHSRLLCAFTGLTTDVQTLMQDLAAAAASYTITEG-RPLQPAAAAALLSSMLYARRRSPYFCETIVAGLTRSAEAFVRSHDVLGAAGGAEDGFAVMGTSAESLYGLCEAFYRPDMTPEELADTAEHCLVAALERDCLSGHGVVVHLLTEQGISSREL 230
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A6H5JNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ3_9PHAE) HSP 1 Score: 214 bits (544), Expect = 4.730e-68 Identity = 113/142 (79.58%), Postives = 116/142 (81.69%), Query Frame = 0
Query: 87 MQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
MQDLSSEVALKSL E DRPI+PAALA LLSTLLYSRRGSP+FVEPIVAGLD +GKPYLCGQ SLYGTCEAFFR GMEREELFR ASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD
Sbjct: 1 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGKPYLCGQ--------------------SLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 122
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: M2W804_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W804_GALSU) HSP 1 Score: 214 bits (544), Expect = 7.410e-67 Identity = 107/202 (52.97%), Postives = 143/202 (70.79%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
L NGG LAMAG CVA+A DRRFG++ + T+ R+ KIN +L+ G TGL TDV T+ + L L E +R I PA+ A ++++ LYSRR SP+FVEP+VAGL +G+PYLC QD+LGAP+ +DFVV+GT A+SLYGT E F++ + ELF S+ LL+A++RDCLSG+GA+VH+IT GIET+ L RMD
Sbjct: 6 LTYNGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVTTLYNRFVQRLNLYRLRE-EREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLSGWGAIVHMITLNGIETKVLKARMD 206
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: M1V7D3_CYAM1 (20S core proteasome subunit beta 3 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V7D3_CYAM1) HSP 1 Score: 210 bits (534), Expect = 2.510e-65 Identity = 101/204 (49.51%), Postives = 139/204 (68.14%), Query Frame = 0
Query: 25 NPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
NPL NGG+ A G CVA+A DRRFG ++ +A R+ +++ +LV G TGL TD LT+ + + L LGE P PA ++AL+S LLY RR +P+FVEP++ GL KPY C D+LG P+E D+FV AGT A+SLYGT E F+R G++ E+LF ++C+L+AL+RDCLSG+GAVV+++ EG+ REL RMD
Sbjct: 5 NPLHYNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTLAERVRMRTNLYRLGEKREP-KPATISALVSALLYERRFAPYFVEPVIVGLSGDNKPYCCSMDLLGTPMETDEFVAAGTCAESLYGTGETFWRPGLDPEDLFEVTAQCMLAALDRDCLSGWGAVVYVLHSEGVTVRELKARMD 207
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A3P3Y3V5_PLABS (Proteasome subunit beta n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y3V5_PLABS) HSP 1 Score: 207 bits (528), Expect = 1.850e-64 Identity = 97/202 (48.02%), Postives = 146/202 (72.28%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
LE NG + +AM GK CVA+A D R+G++ Q V+T+ +++ K++ +L G +GL TD+ TV L ++ L L E +R I P A L+ST+LYS+R P+FVEP+VAG+D +GKP++C D++GAPV +DFVV+GT+++ LYGTCE+ + + EELF S+ LL+A++RDCLSG+GA VH+IT++G+ +R+L R D
Sbjct: 4 LEYNGSAIVAMVGKDCVAIASDTRYGVQAQTVATDMEKIFKMHDRLYVGLSGLATDMQTVRNTLQFQLKLYKLRE-EREIEPHVFANLVSTMLYSKRFGPYFVEPVVAGIDKKGKPFICAMDLIGAPVFAEDFVVSGTASEELYGTCESLYTPNLGPEELFETVSQALLAAVDRDCLSGWGATVHIITKDGVTSRKLKCRQD 204
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A2V3J6M2_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR) HSP 1 Score: 206 bits (524), Expect = 7.460e-64 Identity = 99/202 (49.01%), Postives = 146/202 (72.28%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
LE NGG LAMAGK CVA+A D+R G++ V+ +A R+ +++ +L G TGL TD+ T+ Q ++ L ++ E +R + P A+L+S+ LYS+R +P+F EP++AGLD KPY+C D+LG E +FVVAGT A+SL+GTCE F++ +E +ELF S+ LL+AL+RDC+SG+GAVVH+IT++G++T+EL RMD
Sbjct: 4 LEYNGGCVLAMAGKECVAIASDKRLGVQLTTVAMDANRIFRMHDKLYLGLTGLMTDIQTLDQLFRFKLELYAMRE-NRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A7S3K6H9_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6H9_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.500e-63 Identity = 102/202 (50.50%), Postives = 143/202 (70.79%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
LE NG + +AMAGK CVA+A D RFGL Q V+ + ++V K++ ++ G GL TDV T+ L ++AL L E +R + P A AALLS +LY +R P+FVEP+VAGL G P+LCG D++GAPV +DFVV+GT A +L G CE+FFR ME ++LF S+CLL++++RD LSG+GA+VH+IT +G+ ++ L RMD
Sbjct: 4 LEHNGAAIVAMAGKNCVAIASDTRFGLRQQTVTCDFEKVFKMSDKIYVGLAGLATDVQTLRATLKFKLALYKLRE-ERKMKPEAFAALLSHMLYEKRFGPYFVEPLVAGLKEDGTPFLCGMDLIGAPVFTNDFVVSGTCASNLNGLCESFFRPDMEPDDLFETISQCLLASVDRDALSGWGAIVHVITPQGVTSKRLKARMD 204
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA) HSP 1 Score: 204 bits (518), Expect = 6.050e-63 Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
LE NG + +AMAGK CV +A D R G++ Q V+T+ K+V K+N +L CG GL +DV T+ Q L L L E +R ++P + LLSTLLY +R P+FVEPIVAGLD++GKP+L G D++GAPV DDFVV+GT ++YG CE ++ ME ++LF ++ LL++++RD LSG+G VVH+IT++G+ +REL R D
Sbjct: 4 LEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELRE-EREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Match: A0A6U6IRL2_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U6IRL2_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.440e-62 Identity = 99/202 (49.01%), Postives = 141/202 (69.80%), Query Frame = 0
Query: 27 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKINGQLVCGFTGLWTDVLTVMQDLSSEVALKSLGEGDRPISPAALAALLSTLLYSRRGSPFFVEPIVAGLDSQGKPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRVGMEREELFRAASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 228
LE NG + +AMAGKGCV +A D R G++ Q V+T+ ++V K+N +L G GL TDV T+ Q L L L E +R +SP ++ LLS LLY +R P+F+EP+VAGLD GKP+L G D++GAPV DDFVV+GT+ +LYG CE ++ ME ++LF ++ LL++++RD LSG+G VVH+IT++G+ +REL R D
Sbjct: 4 LEYNGAAIIAMAGKGCVGIASDTRLGIQAQTVATDFRKVFKMNDRLFVGLAGLATDVQTMDQLLRFRQNLYELRE-ERQMSPRVMSNLLSNLLYEKRFGPYFIEPVVAGLDENGKPFLSGMDLIGAPVYTDDFVVSGTATGNLYGMCETLYKPDMEADQLFETLAQALLASVDRDALSGWGGVVHIITKDGVMSRELKGRQD 204 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig84.16125.1 ID=prot_C-linearis_contig84.16125.1|Name=mRNA_C-linearis_contig84.16125.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=229bpback to top |