prot_C-linearis_contig84.16120.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16120.1
Unique Nameprot_C-linearis_contig84.16120.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length172
Homology
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Match: D8LMR6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR6_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.230e-80
Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 0
Query:    1 MGCSGSKEETRRGHSPRKPWCHLQPTTPSTTERRLVMGLQDLKRQMDEENYGKGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLHKAHVDLGEEWEDTNIDECLQHLHGRAEDHDKVGLREFVVMLAVGRVCRPLKRRSTVFVPLQHQQ 164
            MGC GSKEET    +PRK W    P+TPS+ +RRL+ GLQDLKRQM EE+  K +FSF KIILKLGTIEK+L+R+ AVF+SVDHGNKGHVTKDELKEGLH+AHVDLG+EWEDTNID+CLQHL GR    DKVGLREFVVMLAVGRVCRPLKRRS+VFVPLQ +Q
Sbjct:    1 MGCHGSKEETPTCQAPRKMWRSFPPSTPSSAQRRLIEGLQDLKRQMAEESGEKESFSFTKIILKLGTIEKILQRINAVFKSVDHGNKGHVTKDELKEGLHRAHVDLGDEWEDTNIDDCLQHLQGR---DDKVGLREFVVMLAVGRVCRPLKRRSSVFVPLQEEQ 161          
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Match: A0A6H5JR94_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR94_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 3.160e-79
Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 0
Query:    1 MGCSGSKEETRRGHSPRKPWCHLQPTTPSTTERRLVMGLQDLKRQMDEENYGKGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLHKAHVDLGEEWEDTNIDECLQHLHGRAEDHDKVGLREFVVMLAVGRVCRPLKRRSTVFVPLQHQQ 164
            MGC GSKEET    +PRK W    P TP++ +RRL+ GLQDLKRQMDEE+ GK +FSF KIILKLGTIEK+L R+ AVF+SVDHGNKGHVTKDELKEGL +AHVDLG+EWEDTNID+CLQHLHGR    DKVGLREFVVMLAVGRVCRPLKRRS+VFVPL+ +Q
Sbjct:    1 MGCHGSKEETPTCQAPRKMWRSFPPPTPTSAQRRLIEGLQDLKRQMDEESGGKESFSFTKIILKLGTIEKILHRINAVFQSVDHGNKGHVTKDELKEGLRRAHVDLGDEWEDTNIDDCLQHLHGR---DDKVGLREFVVMLAVGRVCRPLKRRSSVFVPLEEEQ 161          
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Match: A0A835YSL5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.760e-10
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 0
Query:    1 MGCSGSKEETRRGHSPRKPWCHLQPTTP----STTERRLVMGLQDLKRQMDEENYG-KGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLHKAHVDLGEEWEDTNIDECLQHLHGRAEDHDKVGLREFVVMLAVGRVCR 148
            MGC+ S  ++  G +         P+TP    +   ++++  L+D K ++D  +     AFSF KI+LKLGTI++VLRRV++V+ S D    G V+ D+ K       + L     D     C        E+  ++  R+F VMLAV RV R
Sbjct:    1 MGCTASHCDSSHGKNDTPLTKKSSPSTPGHGHNANNKQVLDALRDRKWELDHADADLASAFSFAKIVLKLGTIKRVLRRVQSVYTSCDADCDGKVSCDDFKRACQDMRLGLEAGAVDKVFAIC------GVENSAQLSFRDFTVMLAVARVMR 147          
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Match: A0A836CAN3_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.430e-8
Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 0
Query:   30 TTERRLVMGLQDLKRQMD----EENYGKGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLHKAHVDLGEEWEDTNIDECLQHLHGRAEDHDKVGLREFVVMLAVGRVCRPLKRRS 154
            T +++L+  L+D K  +     +   G  AFSF KI+LK+GTI++VL  V+  F  +     G V++ +L +    A V + E   D     C       A D   +GLR FVV+LAV RV     +R+
Sbjct:   30 TFDQQLLAALKDRKWDLQHPAGQPADGAAAFSFTKILLKMGTIKRVLAHVELAFAELAQDEDGRVSRQQLLQACEDAQVPMDEAILDNVFAAC------EAADGGSLGLRGFVVLLAVARVMAQSAQRN 152          
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Match: A0A7S2UXD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXD7_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 6.720e-5
Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0
Query:   32 ERRLVMGLQDLKRQMDEENYGKGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLHKAHVDLGEEWEDTNIDECLQ--HLHGRAEDHDKVGLREFVVMLAVGRV 146
            +R++V  L+  K Q+  E  G+    F +I+LK GTI KV+  ++ VF   D    G +   E +  L +   +L       ++DE  +   +    ++H K+GL+EF+V+LA+  V
Sbjct:   46 DRKIVQALRRKKEQL--ERAGRLKTKFDRILLKFGTINKVMDHLQQVFNQFDDNCDGFMDMGEFQRALGEVDANL-------SLDELQEIFQVSDLTKEH-KLGLKEFIVVLAISNV 152          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMR6_ECTSI1.230e-8075.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JR94_9PHAE3.160e-7975.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YSL5_9STRA2.760e-1032.68EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CAN3_9STRA1.430e-833.33EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2UXD7_9STRA6.720e-529.91Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 36..141
e-value: 5.1E-7
score: 31.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 70..105
score: 9.994
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 41..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:585359..594298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16120.1mRNA_C-linearis_contig84.16120.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 585359..594340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16120.1 ID=prot_C-linearis_contig84.16120.1|Name=mRNA_C-linearis_contig84.16120.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=172bp
MGCSGSKEETRRGHSPRKPWCHLQPTTPSTTERRLVMGLQDLKRQMDEEN
YGKGAFSFPKIILKLGTIEKVLRRVKAVFESVDHGNKGHVTKDELKEGLH
KAHVDLGEEWEDTNIDECLQHLHGRAEDHDKVGLREFVVMLAVGRVCRPL
KRRSTVFVPLQHQQGKANGAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair